RNA–Protein interactions for RNA: ENST00000373264.4

CDK9-201, Transcript of cyclin dependent kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK9, Length 2,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-201ENST00000373264 CDHR5Q9HBB8 845 aa24.92■■□□□ 1.58
CDK9-201ENST00000373264 WDR35Q9P2L0 1181 aa24.92■■□□□ 1.58
CDK9-201ENST00000373264 PRKAG3Q9UGI9 489 aa24.92■■□□□ 1.58
CDK9-201ENST00000373264 GJD2Q9UKL4 321 aa24.92■■□□□ 1.58
CDK9-201ENST00000373264 CHMP2BQ9UQN3 213 aa24.92■■□□□ 1.58
CDK9-201ENST00000373264 H3BRB1 525 aa24.92■■□□□ 1.58
CDK9-201ENST00000373264 SUN1O94901 812 aa24.92■■□□□ 1.58
CDK9-201ENST00000373264 IBSPP21815 317 aaPredicted RBP24.92■■□□□ 1.58
CDK9-201ENST00000373264 CA9Q16790 459 aa24.92■■□□□ 1.58
CDK9-201ENST00000373264 ZNF792Q3KQV3 632 aa24.92■■□□□ 1.58
CDK9-201ENST00000373264 SCUBE3Q8IX30 993 aa24.92■■□□□ 1.58
CDK9-201ENST00000373264 KIF2BQ8N4N8 673 aa24.92■■□□□ 1.58
CDK9-201ENST00000373264 SGSM3Q96HU1 749 aa24.92■■□□□ 1.58
CDK9-201ENST00000373264 TUT1Q9H6E5 874 aaKnown RBP24.92■■□□□ 1.58
CDK9-201ENST00000373264 ACTL7BQ9Y614 415 aa24.92■■□□□ 1.58
CDK9-201ENST00000373264 APOC4-APOC2K7ER74 178 aa24.91■■□□□ 1.58
CDK9-201ENST00000373264 ADCY6O43306 1168 aa24.91■■□□□ 1.58
CDK9-201ENST00000373264 APOC2P02655 101 aa24.91■■□□□ 1.58
CDK9-201ENST00000373264 HMGCRP04035 888 aa24.91■■□□□ 1.58
CDK9-201ENST00000373264 GPD1P21695 349 aa24.91■■□□□ 1.58
CDK9-201ENST00000373264 TNFAIP2Q03169 654 aa24.91■■□□□ 1.58
CDK9-201ENST00000373264 FAXCQ5TGI0 409 aa24.91■■□□□ 1.58
CDK9-201ENST00000373264 TTC30AQ86WT1 665 aa24.91■■□□□ 1.58
CDK9-201ENST00000373264 PARP9Q8IXQ6 854 aa24.91■■□□□ 1.58
CDK9-201ENST00000373264 C18orf25Q96B23 403 aaPredicted RBP24.91■■□□□ 1.58
CDK9-201ENST00000373264 ZNF408Q9H9D4 720 aa24.91■■□□□ 1.58
CDK9-201ENST00000373264 TUBGCP4Q9UGJ1 667 aa24.91■■□□□ 1.58
CDK9-201ENST00000373264 EFR3BQ9Y2G0 817 aa24.91■■□□□ 1.58
CDK9-201ENST00000373264 KRT4P19013 534 aa24.91■■□□□ 1.58
CDK9-201ENST00000373264 CA4P22748 312 aa24.91■■□□□ 1.58
CDK9-201ENST00000373264 GSCP56915 257 aaPredicted RBP24.91■■□□□ 1.58
CDK9-201ENST00000373264 NCALDP61601 193 aa24.91■■□□□ 1.58
CDK9-201ENST00000373264 ELF3P78545 371 aaPredicted RBP24.91■■□□□ 1.58
CDK9-201ENST00000373264 DPYSL3Q14195 570 aa24.91■■□□□ 1.58
CDK9-201ENST00000373264 ECHDC2Q86YB7 292 aa24.91■■□□□ 1.58
CDK9-201ENST00000373264 TDRPQ86YL5 185 aa24.91■■□□□ 1.58
CDK9-201ENST00000373264 AGGF1Q8N302 714 aaeCLIP24.91■■□□□ 1.58
CDK9-201ENST00000373264 PITPNM3Q9BZ71 974 aa24.91■■□□□ 1.58
CDK9-201ENST00000373264 FAM49AQ9H0Q0 323 aaPredicted RBP24.91■■□□□ 1.58
CDK9-201ENST00000373264 SNTG2Q9NY99 539 aa24.91■■□□□ 1.58
CDK9-201ENST00000373264 SNX9Q9Y5X1 595 aa24.91■■□□□ 1.58
CDK9-201ENST00000373264 KAT6AQ92794 2004 aa24.9■■□□□ 1.58
CDK9-201ENST00000373264 PLXNA1Q9UIW2 1896 aa24.9■■□□□ 1.58
CDK9-201ENST00000373264 NPTXRO95502 500 aa24.9■■□□□ 1.58
CDK9-201ENST00000373264 SNAI1O95863 264 aaPredicted RBP24.9■■□□□ 1.58
CDK9-201ENST00000373264 CCDC14Q49A88 953 aa24.9■■□□□ 1.58
CDK9-201ENST00000373264 C9orf131Q5VYM1 1079 aa24.9■■□□□ 1.58
CDK9-201ENST00000373264 DARS2Q6PI48 645 aaKnown RBP24.9■■□□□ 1.58
CDK9-201ENST00000373264 PPP1R21Q6ZMI0 780 aa24.9■■□□□ 1.58
CDK9-201ENST00000373264 RIBC1Q8N443 379 aaPredicted RBP24.9■■□□□ 1.58
CDK9-201ENST00000373264 CCDC63Q8NA47 563 aa24.9■■□□□ 1.58
CDK9-201ENST00000373264 PPTC7Q8NI37 304 aa24.9■■□□□ 1.58
CDK9-201ENST00000373264 EIF2AQ9BY44 585 aaKnown RBP24.9■■□□□ 1.58
CDK9-201ENST00000373264 VRTNQ9H8Y1 702 aa24.9■■□□□ 1.58
CDK9-201ENST00000373264 CYP3A43Q9HB55 503 aa24.9■■□□□ 1.58
CDK9-201ENST00000373264 NGRNQ9NPE2 291 aaKnown RBP24.9■■□□□ 1.58
CDK9-201ENST00000373264 SETD4Q9NVD3 440 aa24.9■■□□□ 1.58
CDK9-201ENST00000373264 CDKN2AIPQ9NXV6 580 aaPredicted RBP24.9■■□□□ 1.58
CDK9-201ENST00000373264 ATICP31939 592 aa24.9■■□□□ 1.58
CDK9-201ENST00000373264 ATXN1P54253 815 aaKnown RBP24.9■■□□□ 1.58
CDK9-201ENST00000373264 ARL4CP56559 192 aa24.9■■□□□ 1.58
CDK9-201ENST00000373264 IL9RQ01113 521 aa24.9■■□□□ 1.58
CDK9-201ENST00000373264 INCA1Q0VD86 236 aa24.9■■□□□ 1.58
CDK9-201ENST00000373264 MTFR1Q15390 333 aa24.9■■□□□ 1.58
CDK9-201ENST00000373264 CLEC4CQ8WTT0 213 aa24.9■■□□□ 1.58
CDK9-201ENST00000373264 SMC6Q96SB8 1091 aa24.9■■□□□ 1.58
CDK9-201ENST00000373264 KATNBL1Q9H079 304 aa24.9■■□□□ 1.58
CDK9-201ENST00000373264 ECT2Q9H8V3 914 aa24.9■■□□□ 1.58
CDK9-201ENST00000373264 ASNSD1Q9NWL6 643 aa24.9■■□□□ 1.58
CDK9-201ENST00000373264 ARL2BPQ9Y2Y0 163 aa24.9■■□□□ 1.58
CDK9-201ENST00000373264 A0A1B0GUA9 196 aa24.89■■□□□ 1.58
CDK9-201ENST00000373264 WDR91A4D1P6 747 aa24.89■■□□□ 1.58
CDK9-201ENST00000373264 MCF2LO15068 1137 aa24.89■■□□□ 1.58
CDK9-201ENST00000373264 IL4RP24394 825 aa24.89■■□□□ 1.58
CDK9-201ENST00000373264 RBP5P82980 135 aa24.89■■□□□ 1.58
CDK9-201ENST00000373264 GRIK4Q16099 956 aa24.89■■□□□ 1.58
CDK9-201ENST00000373264 GALNTL6Q49A17 601 aa24.89■■□□□ 1.58
CDK9-201ENST00000373264 EFHC2Q5JST6 749 aa24.89■■□□□ 1.58
CDK9-201ENST00000373264 TTC13Q8NBP0 860 aa24.89■■□□□ 1.58
CDK9-201ENST00000373264 PAFAH2Q99487 392 aa24.89■■□□□ 1.58
CDK9-201ENST00000373264 MIS12Q9H081 205 aa24.89■■□□□ 1.58
CDK9-201ENST00000373264 DPEP3Q9H4B8 488 aa24.89■■□□□ 1.58
CDK9-201ENST00000373264 PSMC3IPQ9P2W1 217 aaPredicted RBP24.89■■□□□ 1.58
CDK9-201ENST00000373264 ZMYND8Q9ULU4 1186 aaPredicted RBP24.89■■□□□ 1.58
CDK9-201ENST00000373264 HEY1Q9Y5J3 304 aa24.89■■□□□ 1.58
CDK9-201ENST00000373264 ZSWIM8A7E2V4 1837 aa24.89■■□□□ 1.57
CDK9-201ENST00000373264 TYROBPO43914 113 aa24.89■■□□□ 1.57
CDK9-201ENST00000373264 GEMIN4P57678 1058 aaKnown RBP24.89■■□□□ 1.57
CDK9-201ENST00000373264 LCLAT1Q6UWP7 414 aa24.89■■□□□ 1.57
CDK9-201ENST00000373264 IFNLR1Q8IU57 520 aaPredicted RBP24.89■■□□□ 1.57
CDK9-201ENST00000373264 GPRC5AQ8NFJ5 357 aa24.89■■□□□ 1.57
CDK9-201ENST00000373264 CNPY3Q9BT09 278 aa24.89■■□□□ 1.57
CDK9-201ENST00000373264 NT5C1AQ9BXI3 368 aa24.89■■□□□ 1.57
CDK9-201ENST00000373264 MAGEB2O15479 319 aa24.88■■□□□ 1.57
CDK9-201ENST00000373264 SMPD1P17405 629 aa24.88■■□□□ 1.57
CDK9-201ENST00000373264 CEP128Q6ZU80 1094 aa24.88■■□□□ 1.57
CDK9-201ENST00000373264 KHSRPQ92945 711 aaKnown RBP eCLIP24.88■■□□□ 1.57
CDK9-201ENST00000373264 GBA2Q9HCG7 927 aaPredicted RBP24.88■■□□□ 1.57
CDK9-201ENST00000373264 YBX3P16989 372 aaKnown RBP eCLIP24.88■■□□□ 1.57
CDK9-201ENST00000373264 ELK3P41970 407 aa24.88■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms