RNA–Protein interactions for RNA: ENST00000373253.7

NCDN-203, Transcript of neurochondrin, humanhuman

TSL 1 (best) BASIC

Gene NCDN, Length 3,677 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCDN-203ENST00000373253 SULT1E1P49888 294 aa13.78□□□□□ -0.2
NCDN-203ENST00000373253 MCL1Q07820 350 aa13.78□□□□□ -0.2
NCDN-203ENST00000373253 MROH9Q5TGP6 573 aa13.78□□□□□ -0.2
NCDN-203ENST00000373253 TRMT10CQ7L0Y3 403 aaKnown RBP13.78□□□□□ -0.2
NCDN-203ENST00000373253 SLC4A11Q8NBS3 891 aa13.78□□□□□ -0.2
NCDN-203ENST00000373253 SLC7A14Q8TBB6 771 aa13.78□□□□□ -0.2
NCDN-203ENST00000373253 ABHD16BQ9H3Z7 469 aa13.78□□□□□ -0.2
NCDN-203ENST00000373253 SLCO1B3Q9NPD5 702 aa13.78□□□□□ -0.2
NCDN-203ENST00000373253 CYTH4Q9UIA0 394 aa13.78□□□□□ -0.2
NCDN-203ENST00000373253 ADAMTS5Q9UNA0 930 aa13.78□□□□□ -0.2
NCDN-203ENST00000373253 GHRP10912 638 aa13.78□□□□□ -0.2
NCDN-203ENST00000373253 RBL1P28749 1068 aa13.78□□□□□ -0.2
NCDN-203ENST00000373253 ASPAP45381 313 aa13.78□□□□□ -0.2
NCDN-203ENST00000373253 ADIGQ0VDE8 80 aa13.78□□□□□ -0.2
NCDN-203ENST00000373253 AGBL2Q5U5Z8 902 aa13.78□□□□□ -0.2
NCDN-203ENST00000373253 PLEKHA7Q6IQ23 1121 aa13.78□□□□□ -0.2
NCDN-203ENST00000373253 PLPPR4Q7Z2D5 763 aa13.78□□□□□ -0.2
NCDN-203ENST00000373253 PID1Q7Z2X4 250 aa13.78□□□□□ -0.2
NCDN-203ENST00000373253 HACE1Q8IYU2 909 aa13.78□□□□□ -0.2
NCDN-203ENST00000373253 PPP1R36Q96LQ0 422 aa13.78□□□□□ -0.2
NCDN-203ENST00000373253 LRRC19Q9H756 370 aa13.78□□□□□ -0.2
NCDN-203ENST00000373253 GRIN2DO15399 1336 aa13.78□□□□□ -0.2
NCDN-203ENST00000373253 DOCK5Q9H7D0 1870 aa13.78□□□□□ -0.2
NCDN-203ENST00000373253 A0A1W2PPM1 405 aa13.78□□□□□ -0.2
NCDN-203ENST00000373253 H0Y3Z8 333 aa13.78□□□□□ -0.2
NCDN-203ENST00000373253 LIASO43766 372 aa13.78□□□□□ -0.2
NCDN-203ENST00000373253 RPS6KA5O75582 802 aa13.78□□□□□ -0.2
NCDN-203ENST00000373253 SMIM10L2AP0DMW4 78 aa13.78□□□□□ -0.2
NCDN-203ENST00000373253 SMIM10L2BP0DMW5 78 aa13.78□□□□□ -0.2
NCDN-203ENST00000373253 KDELR1P24390 212 aa13.78□□□□□ -0.2
NCDN-203ENST00000373253 THPOP40225 353 aa13.78□□□□□ -0.2
NCDN-203ENST00000373253 VCPP55072 806 aaKnown RBP13.78□□□□□ -0.2
NCDN-203ENST00000373253 TARBP2Q15633 366 aaKnown RBP13.78□□□□□ -0.2
NCDN-203ENST00000373253 SH3D19Q5HYK7 790 aa13.78□□□□□ -0.2
NCDN-203ENST00000373253 ILDR2Q71H61 639 aa13.78□□□□□ -0.2
NCDN-203ENST00000373253 STKLD1Q8NE28 680 aa13.78□□□□□ -0.2
NCDN-203ENST00000373253 NPLOC4Q8TAT6 608 aa13.78□□□□□ -0.2
NCDN-203ENST00000373253 MAML1Q92585 1016 aa13.78□□□□□ -0.2
NCDN-203ENST00000373253 UPF1Q92900 1129 aaKnown RBP eCLIP13.78□□□□□ -0.21e-6■■■■□ 22.5
NCDN-203ENST00000373253 FERMT1Q9BQL6 677 aa13.78□□□□□ -0.2
NCDN-203ENST00000373253 UNKQ9C0B0 810 aaKnown RBP13.78□□□□□ -0.2
NCDN-203ENST00000373253 IFT122Q9HBG6 1241 aa13.78□□□□□ -0.2
NCDN-203ENST00000373253 NMRK2Q9NPI5 230 aa13.78□□□□□ -0.2
NCDN-203ENST00000373253 MCM3APO60318 1980 aa13.77□□□□□ -0.2
NCDN-203ENST00000373253 M0QYT0 321 aa13.77□□□□□ -0.2
NCDN-203ENST00000373253 APOL1O14791 398 aa13.77□□□□□ -0.2
NCDN-203ENST00000373253 EIF4BP23588 611 aaKnown RBP13.77□□□□□ -0.2
NCDN-203ENST00000373253 TNFRSF8P28908 595 aa13.77□□□□□ -0.2
NCDN-203ENST00000373253 CORO7P57737 925 aa13.77□□□□□ -0.2
NCDN-203ENST00000373253 TFDP2Q14188 446 aa13.77□□□□□ -0.2
NCDN-203ENST00000373253 FBXO47Q5MNV8 452 aa13.77□□□□□ -0.2
NCDN-203ENST00000373253 HEATR6Q6AI08 1181 aaKnown RBP13.77□□□□□ -0.2
NCDN-203ENST00000373253 DENND5BQ6ZUT9 1274 aa13.77□□□□□ -0.2
NCDN-203ENST00000373253 PHF13Q86YI8 300 aaPredicted RBP13.77□□□□□ -0.2
NCDN-203ENST00000373253 MREGQ8N565 214 aa13.77□□□□□ -0.2
NCDN-203ENST00000373253 NPHS2Q9NP85 383 aa13.77□□□□□ -0.2
NCDN-203ENST00000373253 DDX56Q9NY93 547 aaKnown RBP13.77□□□□□ -0.2
NCDN-203ENST00000373253 KLHL8Q9P2G9 620 aaPredicted RBP13.77□□□□□ -0.2
NCDN-203ENST00000373253 VDRP11473 427 aa13.77□□□□□ -0.21
NCDN-203ENST00000373253 ELK3P41970 407 aa13.77□□□□□ -0.21
NCDN-203ENST00000373253 USP50Q70EL3 339 aaPredicted RBP13.77□□□□□ -0.21
NCDN-203ENST00000373253 CCDC125Q86Z20 511 aa13.77□□□□□ -0.21
NCDN-203ENST00000373253 PYROXD2Q8N2H3 581 aa13.77□□□□□ -0.21
NCDN-203ENST00000373253 WDTC1Q8N5D0 677 aa13.77□□□□□ -0.21
NCDN-203ENST00000373253 ART4Q93070 314 aa13.77□□□□□ -0.21
NCDN-203ENST00000373253 CXorf56Q9H5V9 222 aa13.77□□□□□ -0.21
NCDN-203ENST00000373253 GOLGA8TH3BQL2 631 aa13.77□□□□□ -0.21
NCDN-203ENST00000373253 NCAM1P13591 858 aa13.77□□□□□ -0.21
NCDN-203ENST00000373253 MLH1P40692 756 aa13.77□□□□□ -0.21
NCDN-203ENST00000373253 WSCD1Q658N2 575 aa13.77□□□□□ -0.21
NCDN-203ENST00000373253 LVRNQ6Q4G3 990 aa13.77□□□□□ -0.21
NCDN-203ENST00000373253 TSHZ1Q6ZSZ6 1077 aa13.77□□□□□ -0.21
NCDN-203ENST00000373253 KATNAL2Q8IYT4 538 aa13.77□□□□□ -0.21
NCDN-203ENST00000373253 FBXO41Q8TF61 875 aa13.77□□□□□ -0.21
NCDN-203ENST00000373253 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.77□□□□□ -0.21
NCDN-203ENST00000373253 WHRNQ9P202 907 aa13.77□□□□□ -0.21
NCDN-203ENST00000373253 GLTPD2A6NH11 291 aa13.76□□□□□ -0.21
NCDN-203ENST00000373253 CYB561D2O14569 222 aa13.76□□□□□ -0.21
NCDN-203ENST00000373253 CNMDO75829 334 aa13.76□□□□□ -0.21
NCDN-203ENST00000373253 HMBSP08397 361 aa13.76□□□□□ -0.21
NCDN-203ENST00000373253 RPL22P35268 128 aaKnown RBP13.76□□□□□ -0.21
NCDN-203ENST00000373253 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.76□□□□□ -0.21
NCDN-203ENST00000373253 FIS1Q9Y3D6 152 aa13.76□□□□□ -0.21
NCDN-203ENST00000373253 hCG_1818297A0A087WSY0 165 aa13.76□□□□□ -0.21
NCDN-203ENST00000373253 TCRBV7S3A2A0A539 114 aa13.76□□□□□ -0.21
NCDN-203ENST00000373253 DCAF8L1A6NGE4 600 aa13.76□□□□□ -0.21
NCDN-203ENST00000373253 GAS2O43903 313 aaKnown RBP13.76□□□□□ -0.21
NCDN-203ENST00000373253 TSPAN1O60635 241 aa13.76□□□□□ -0.21
NCDN-203ENST00000373253 TFE3P19532 575 aaPredicted RBP13.76□□□□□ -0.21
NCDN-203ENST00000373253 SLC26A2P50443 739 aa13.76□□□□□ -0.21
NCDN-203ENST00000373253 CCDC6Q16204 474 aa13.76□□□□□ -0.21
NCDN-203ENST00000373253 NOL9Q5SY16 702 aaKnown RBP13.76□□□□□ -0.21
NCDN-203ENST00000373253 CROCCP2Q86T23 111 aa13.76□□□□□ -0.21
NCDN-203ENST00000373253 DNAI2Q9GZS0 605 aa13.76□□□□□ -0.21
NCDN-203ENST00000373253 FZD8Q9H461 694 aa13.76□□□□□ -0.21
NCDN-203ENST00000373253 ZC3H7BQ9UGR2 993 aaKnown RBP13.76□□□□□ -0.21
NCDN-203ENST00000373253 MEIS3P2A8K0S8 358 aa13.76□□□□□ -0.21
NCDN-203ENST00000373253 FAM155BO75949 473 aa13.76□□□□□ -0.21
NCDN-203ENST00000373253 ATG7O95352 703 aa13.76□□□□□ -0.21
NCDN-203ENST00000373253 MCF2P10911 925 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 183.9 ms