RNA–Protein interactions for RNA: ENST00000373243.6

NCDN-202, Transcript of neurochondrin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCDN, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCDN-202ENST00000373243 PDE5AO76074 875 aa12.6□□□□□ -0.39
NCDN-202ENST00000373243 CETPP11597 493 aa12.6□□□□□ -0.39
NCDN-202ENST00000373243 PDGFRAP16234 1089 aa12.6□□□□□ -0.39
NCDN-202ENST00000373243 GNAZP19086 355 aa12.6□□□□□ -0.39
NCDN-202ENST00000373243 MTTPP55157 894 aa12.6□□□□□ -0.39
NCDN-202ENST00000373243 RTP1P59025 263 aa12.6□□□□□ -0.39
NCDN-202ENST00000373243 MYBPC2Q14324 1141 aa12.6□□□□□ -0.39
NCDN-202ENST00000373243 PGM5Q15124 567 aa12.6□□□□□ -0.39
NCDN-202ENST00000373243 XKR3Q5GH77 459 aa12.6□□□□□ -0.39
NCDN-202ENST00000373243 DHRS1Q96LJ7 313 aa12.6□□□□□ -0.39
NCDN-202ENST00000373243 CATSPER2Q96P56 530 aa12.6□□□□□ -0.39
NCDN-202ENST00000373243 PCDH18Q9HCL0 1135 aa12.6□□□□□ -0.39
NCDN-202ENST00000373243 HESX1Q9UBX0 185 aa12.6□□□□□ -0.39
NCDN-202ENST00000373243 TIAM2Q8IVF5 1701 aa12.6□□□□□ -0.39
NCDN-202ENST00000373243 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.6□□□□□ -0.39
NCDN-202ENST00000373243 ZWINTO95229 277 aa12.6□□□□□ -0.39
NCDN-202ENST00000373243 ELK3P41970 407 aa12.6□□□□□ -0.39
NCDN-202ENST00000373243 GPC3P51654 580 aa12.6□□□□□ -0.39
NCDN-202ENST00000373243 WDR4P57081 412 aaKnown RBP12.6□□□□□ -0.39
NCDN-202ENST00000373243 YWHAEP62258 255 aaKnown RBP12.6□□□□□ -0.39
NCDN-202ENST00000373243 DMPKQ09013 629 aa12.6□□□□□ -0.39
NCDN-202ENST00000373243 SPDYCQ5MJ68 293 aa12.6□□□□□ -0.39
NCDN-202ENST00000373243 TMEM53Q6P2H8 277 aa12.6□□□□□ -0.39
NCDN-202ENST00000373243 GADL1Q6ZQY3 521 aa12.6□□□□□ -0.39
NCDN-202ENST00000373243 NDUFAF2Q8N183 169 aa12.6□□□□□ -0.39
NCDN-202ENST00000373243 TMC2Q8TDI7 906 aa12.6□□□□□ -0.39
NCDN-202ENST00000373243 NSL1Q96IY1 281 aa12.6□□□□□ -0.39
NCDN-202ENST00000373243 CENPOQ9BU64 300 aa12.6□□□□□ -0.39
NCDN-202ENST00000373243 ADAM7Q9H2U9 754 aa12.6□□□□□ -0.39
NCDN-202ENST00000373243 RPF1Q9H9Y2 349 aaKnown RBP12.6□□□□□ -0.39
NCDN-202ENST00000373243 CISHQ9NSE2 258 aa12.6□□□□□ -0.39
NCDN-202ENST00000373243 AKT3Q9Y243 479 aa12.6□□□□□ -0.39
NCDN-202ENST00000373243 CACNA1SQ13698 1873 aa12.6□□□□□ -0.39
NCDN-202ENST00000373243 CCNE2O96020 404 aa12.6□□□□□ -0.39
NCDN-202ENST00000373243 MRPS9P82933 396 aaKnown RBP12.6□□□□□ -0.39
NCDN-202ENST00000373243 CHI3L2Q15782 390 aa12.6□□□□□ -0.39
NCDN-202ENST00000373243 TDRD10Q5VZ19 366 aaKnown RBP12.6□□□□□ -0.39
NCDN-202ENST00000373243 LRRC8BQ6P9F7 803 aa12.6□□□□□ -0.39
NCDN-202ENST00000373243 ZCCHC23Q6ZST2 131 aa12.6□□□□□ -0.39
NCDN-202ENST00000373243 RSPH3Q86UC2 560 aa12.6□□□□□ -0.39
NCDN-202ENST00000373243 MAP4K3Q8IVH8 894 aa12.6□□□□□ -0.39
NCDN-202ENST00000373243 PAF1Q8N7H5 531 aa12.6□□□□□ -0.39
NCDN-202ENST00000373243 TTLL6Q8N841 843 aa12.6□□□□□ -0.39
NCDN-202ENST00000373243 TTC13Q8NBP0 860 aa12.6□□□□□ -0.39
NCDN-202ENST00000373243 CDHR1Q96JP9 859 aa12.6□□□□□ -0.39
NCDN-202ENST00000373243 HERPUD2Q9BSE4 406 aa12.6□□□□□ -0.39
NCDN-202ENST00000373243 TMEM120AQ9BXJ8 343 aa12.6□□□□□ -0.39
NCDN-202ENST00000373243 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.6□□□□□ -0.39
NCDN-202ENST00000373243 SLC17A7Q9P2U7 560 aa12.6□□□□□ -0.39
NCDN-202ENST00000373243 NUB1Q9Y5A7 615 aa12.6□□□□□ -0.39
NCDN-202ENST00000373243 COL16A1Q07092 1604 aaPredicted RBP12.6□□□□□ -0.39
NCDN-202ENST00000373243 LTBP4Q8N2S1 1624 aa12.6□□□□□ -0.39
NCDN-202ENST00000373243 TRPA1O75762 1119 aa12.59□□□□□ -0.39
NCDN-202ENST00000373243 PENKP01210 267 aaPredicted RBP12.59□□□□□ -0.39
NCDN-202ENST00000373243 HIRAP54198 1017 aaPredicted RBP12.59□□□□□ -0.39
NCDN-202ENST00000373243 RSBN1LQ6PCB5 846 aaPredicted RBP12.59□□□□□ -0.39
NCDN-202ENST00000373243 SAMD7Q7Z3H4 446 aa12.59□□□□□ -0.39
NCDN-202ENST00000373243 CCDC60Q8IWA6 550 aaPredicted RBP12.59□□□□□ -0.39
NCDN-202ENST00000373243 PPIL6Q8IXY8 311 aa12.59□□□□□ -0.39
NCDN-202ENST00000373243 ERLEC1Q96DZ1 483 aa12.59□□□□□ -0.39
NCDN-202ENST00000373243 SPATA17Q96L03 361 aa12.59□□□□□ -0.39
NCDN-202ENST00000373243 DHX35Q9H5Z1 703 aaKnown RBP12.59□□□□□ -0.39
NCDN-202ENST00000373243 DCLRE1BQ9H816 532 aa12.59□□□□□ -0.39
NCDN-202ENST00000373243 INPP5FQ9Y2H2 1132 aa12.59□□□□□ -0.39
NCDN-202ENST00000373243 COMMD3-BMI1R4GMX3 469 aa12.59□□□□□ -0.39
NCDN-202ENST00000373243 ADCY3O60266 1144 aa12.59□□□□□ -0.39
NCDN-202ENST00000373243 HOXD12P35452 270 aa12.59□□□□□ -0.39
NCDN-202ENST00000373243 VCPP55072 806 aaKnown RBP12.59□□□□□ -0.39
NCDN-202ENST00000373243 GCNT1Q02742 428 aa12.59□□□□□ -0.39
NCDN-202ENST00000373243 KPNB1Q14974 876 aaKnown RBP12.59□□□□□ -0.39
NCDN-202ENST00000373243 STXBP2Q15833 593 aa12.59□□□□□ -0.39
NCDN-202ENST00000373243 LIN52Q52LA3 116 aa12.59□□□□□ -0.39
NCDN-202ENST00000373243 DPY19L2Q6NUT2 758 aa12.59□□□□□ -0.39
NCDN-202ENST00000373243 OTOAQ7RTW8 1153 aa12.59□□□□□ -0.39
NCDN-202ENST00000373243 TRABD2AQ86V40 505 aa12.59□□□□□ -0.39
NCDN-202ENST00000373243 ZNF354CQ86Y25 554 aa12.59□□□□□ -0.39
NCDN-202ENST00000373243 ZCCHC9Q8N567 271 aaKnown RBP12.59□□□□□ -0.39
NCDN-202ENST00000373243 KCTD17Q8N5Z5 321 aa12.59□□□□□ -0.39
NCDN-202ENST00000373243 DNAAF3Q8N9W5 541 aa12.59□□□□□ -0.39
NCDN-202ENST00000373243 PIP4K2CQ8TBX8 421 aa12.59□□□□□ -0.39
NCDN-202ENST00000373243 EPB41L4BQ9H329 900 aa12.59□□□□□ -0.39
NCDN-202ENST00000373243 BTBD7Q9P203 1132 aa12.59□□□□□ -0.39
NCDN-202ENST00000373243 DOLKQ9UPQ8 538 aa12.59□□□□□ -0.39
NCDN-202ENST00000373243 TMEM98Q9Y2Y6 226 aa12.59□□□□□ -0.39
NCDN-202ENST00000373243 ADAMTS7Q9UKP4 1686 aa12.59□□□□□ -0.39
NCDN-202ENST00000373243 WDR46O15213 610 aaKnown RBP12.59□□□□□ -0.39
NCDN-202ENST00000373243 AVILO75366 819 aa12.59□□□□□ -0.39
NCDN-202ENST00000373243 KRT36O76013 467 aa12.59□□□□□ -0.39
NCDN-202ENST00000373243 KRT38O76015 456 aa12.59□□□□□ -0.39
NCDN-202ENST00000373243 GM2AP17900 193 aa12.59□□□□□ -0.39
NCDN-202ENST00000373243 RFC1P35251 1148 aaPredicted RBP12.59□□□□□ -0.39
NCDN-202ENST00000373243 FAAP100Q0VG06 881 aa12.59□□□□□ -0.39
NCDN-202ENST00000373243 PIGHQ14442 188 aaPredicted RBP12.59□□□□□ -0.39
NCDN-202ENST00000373243 RABGAP1LQ5R372 815 aa12.59□□□□□ -0.39
NCDN-202ENST00000373243 MFSD5Q6N075 450 aa12.59□□□□□ -0.39
NCDN-202ENST00000373243 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.59□□□□□ -0.393e-8■□□□□ 10.1
NCDN-202ENST00000373243 AKT1S1Q96B36 256 aa12.59□□□□□ -0.39
NCDN-202ENST00000373243 ZNF333Q96JL9 665 aa12.59□□□□□ -0.39
NCDN-202ENST00000373243 FAM49BQ9NUQ9 324 aa12.59□□□□□ -0.39
NCDN-202ENST00000373243 MROH7Q68CQ1 1323 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 186.2 ms