RNA–Protein interactions for RNA: ENST00000372621.8

CTPS1-202, Transcript of CTP synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTPS1, Length 3,201 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1-202ENST00000372621 BASP1P80723 227 aaKnown RBP13.32□□□□□ -0.28
CTPS1-202ENST00000372621 PRKD1Q15139 912 aaPredicted RBP13.32□□□□□ -0.28
CTPS1-202ENST00000372621 NOMO1Q15155 1222 aa13.32□□□□□ -0.28
CTPS1-202ENST00000372621 SH3D19Q5HYK7 790 aa13.32□□□□□ -0.28
CTPS1-202ENST00000372621 AEBP2Q6ZN18 517 aaPredicted RBP13.32□□□□□ -0.28
CTPS1-202ENST00000372621 LRRC71Q8N4P6 559 aa13.32□□□□□ -0.28
CTPS1-202ENST00000372621 PTCD3Q96EY7 689 aaKnown RBP13.32□□□□□ -0.28
CTPS1-202ENST00000372621 C2orf40Q9H1Z8 148 aa13.32□□□□□ -0.28
CTPS1-202ENST00000372621 DENND2DQ9H6A0 471 aaPredicted RBP13.32□□□□□ -0.28
CTPS1-202ENST00000372621 HMGXB4Q9UGU5 601 aa13.32□□□□□ -0.28
CTPS1-202ENST00000372621 DNAJC6O75061 913 aa13.32□□□□□ -0.28
CTPS1-202ENST00000372621 FAM155BO75949 473 aa13.32□□□□□ -0.28
CTPS1-202ENST00000372621 IL1BP01584 269 aa13.32□□□□□ -0.28
CTPS1-202ENST00000372621 GPD2P43304 727 aa13.32□□□□□ -0.28
CTPS1-202ENST00000372621 PTK7Q13308 1070 aa13.32□□□□□ -0.28
CTPS1-202ENST00000372621 ORC1Q13415 861 aa13.32□□□□□ -0.28
CTPS1-202ENST00000372621 ATF7IP2Q5U623 682 aa13.32□□□□□ -0.28
CTPS1-202ENST00000372621 LRRC6Q86X45 466 aa13.32□□□□□ -0.28
CTPS1-202ENST00000372621 TMEM192Q8IY95 271 aa13.32□□□□□ -0.28
CTPS1-202ENST00000372621 TMEM130Q8N3G9 435 aa13.32□□□□□ -0.28
CTPS1-202ENST00000372621 C1orf127Q8N9H9 656 aa13.32□□□□□ -0.28
CTPS1-202ENST00000372621 HSPH1Q92598 858 aa13.32□□□□□ -0.28
CTPS1-202ENST00000372621 APOPT1Q96IL0 206 aa13.32□□□□□ -0.28
CTPS1-202ENST00000372621 ELOVL4Q9GZR5 314 aa13.32□□□□□ -0.28
CTPS1-202ENST00000372621 PNPLA8Q9NP80 782 aa13.32□□□□□ -0.28
CTPS1-202ENST00000372621 DCTN4Q9UJW0 460 aa13.32□□□□□ -0.28
CTPS1-202ENST00000372621 UTRNP46939 3433 aa13.31□□□□□ -0.28
CTPS1-202ENST00000372621 IQANK1A0A1B0GTG1 560 aa13.31□□□□□ -0.28
CTPS1-202ENST00000372621 B4GALT5O43286 388 aa13.31□□□□□ -0.28
CTPS1-202ENST00000372621 LPXNO60711 386 aa13.31□□□□□ -0.28
CTPS1-202ENST00000372621 CILPO75339 1184 aa13.31□□□□□ -0.28
CTPS1-202ENST00000372621 LGR5O75473 907 aa13.31□□□□□ -0.28
CTPS1-202ENST00000372621 MICAL2O94851 1124 aa13.31□□□□□ -0.28
CTPS1-202ENST00000372621 MT-ND3P03897 115 aa13.31□□□□□ -0.28
CTPS1-202ENST00000372621 OSTNP61366 133 aa13.31□□□□□ -0.28
CTPS1-202ENST00000372621 SEPT7Q16181 437 aaKnown RBP13.31□□□□□ -0.28
CTPS1-202ENST00000372621 LY6KQ17RY6 165 aa13.31□□□□□ -0.28
CTPS1-202ENST00000372621 KBTBD12Q3ZCT8 623 aa13.31□□□□□ -0.28
CTPS1-202ENST00000372621 NOL9Q5SY16 702 aaKnown RBP13.31□□□□□ -0.28
CTPS1-202ENST00000372621 EEF1DP3Q658K8 133 aa13.31□□□□□ -0.28
CTPS1-202ENST00000372621 NPNTQ6UXI9 565 aa13.31□□□□□ -0.28
CTPS1-202ENST00000372621 LBX2Q6XYB7 198 aa13.31□□□□□ -0.28
CTPS1-202ENST00000372621 KCNV2Q8TDN2 545 aa13.31□□□□□ -0.28
CTPS1-202ENST00000372621 SKA1Q96BD8 255 aa13.31□□□□□ -0.28
CTPS1-202ENST00000372621 TSSK1BQ9BXA7 367 aa13.31□□□□□ -0.28
CTPS1-202ENST00000372621 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.31□□□□□ -0.28
CTPS1-202ENST00000372621 KBTBD13C9JR72 458 aa13.31□□□□□ -0.28
CTPS1-202ENST00000372621 DLDP09622 509 aaKnown RBP13.31□□□□□ -0.28
CTPS1-202ENST00000372621 ZNF143P52747 638 aaPredicted RBP13.31□□□□□ -0.28
CTPS1-202ENST00000372621 ZNF200P98182 395 aaPredicted RBP13.31□□□□□ -0.28
CTPS1-202ENST00000372621 ROR1Q01973 937 aa13.31□□□□□ -0.28
CTPS1-202ENST00000372621 PTPN11Q06124 597 aaPredicted RBP13.31□□□□□ -0.28
CTPS1-202ENST00000372621 FAAP100Q0VG06 881 aa13.31□□□□□ -0.28
CTPS1-202ENST00000372621 MMRN1Q13201 1228 aa13.31□□□□□ -0.28
CTPS1-202ENST00000372621 ZNF667Q5HYK9 610 aa13.31□□□□□ -0.28
CTPS1-202ENST00000372621 TRNP1Q6NT89 227 aa13.31□□□□□ -0.28
CTPS1-202ENST00000372621 CALN1Q9BXU9 219 aa13.31□□□□□ -0.28
CTPS1-202ENST00000372621 CADM1Q9BY67 442 aaKnown RBP13.31□□□□□ -0.28
CTPS1-202ENST00000372621 TRIM55Q9BYV6 548 aa13.31□□□□□ -0.28
CTPS1-202ENST00000372621 SMYD3Q9H7B4 428 aa13.31□□□□□ -0.28
CTPS1-202ENST00000372621 USP29Q9HBJ7 922 aa13.31□□□□□ -0.28
CTPS1-202ENST00000372621 BTBD7Q9P203 1132 aa13.31□□□□□ -0.28
CTPS1-202ENST00000372621 LIN7AO14910 233 aaPredicted RBP13.3□□□□□ -0.28
CTPS1-202ENST00000372621 CHADO15335 359 aa13.3□□□□□ -0.28
CTPS1-202ENST00000372621 CXCL8P10145 99 aa13.3□□□□□ -0.28
CTPS1-202ENST00000372621 MARK3P27448 753 aa13.3□□□□□ -0.28
CTPS1-202ENST00000372621 SH3PXD2AQ5TCZ1 1133 aa13.3□□□□□ -0.28
CTPS1-202ENST00000372621 RIOX2Q8IUF8 465 aa13.3□□□□□ -0.28
CTPS1-202ENST00000372621 TTC8Q8TAM2 541 aa13.3□□□□□ -0.28
CTPS1-202ENST00000372621 NAF1Q96HR8 494 aaKnown RBP13.3□□□□□ -0.28
CTPS1-202ENST00000372621 NUDCD1Q96RS6 583 aa13.3□□□□□ -0.28
CTPS1-202ENST00000372621 GPR20Q99678 358 aa13.3□□□□□ -0.28
CTPS1-202ENST00000372621 CDT1Q9H211 546 aa13.3□□□□□ -0.28
CTPS1-202ENST00000372621 SYNCQ9H7C4 482 aa13.3□□□□□ -0.28
CTPS1-202ENST00000372621 ALG13Q9NP73 1137 aaKnown RBP13.3□□□□□ -0.28
CTPS1-202ENST00000372621 HEY2Q9UBP5 337 aa13.3□□□□□ -0.28
CTPS1-202ENST00000372621 SPAG6O75602 509 aa13.3□□□□□ -0.28
CTPS1-202ENST00000372621 RNF8O76064 485 aa13.3□□□□□ -0.28
CTPS1-202ENST00000372621 IL18RAPO95256 599 aa13.3□□□□□ -0.28
CTPS1-202ENST00000372621 ARIH2O95376 493 aa13.3□□□□□ -0.28
CTPS1-202ENST00000372621 ABL2P42684 1182 aa13.3□□□□□ -0.28
CTPS1-202ENST00000372621 CMPK2Q5EBM0 449 aa13.3□□□□□ -0.28
CTPS1-202ENST00000372621 TRIM50Q86XT4 487 aa13.3□□□□□ -0.28
CTPS1-202ENST00000372621 RTP4Q96DX8 246 aa13.3□□□□□ -0.28
CTPS1-202ENST00000372621 TMEM176AQ96HP8 235 aa13.3□□□□□ -0.28
CTPS1-202ENST00000372621 ARL8BQ9NVJ2 186 aa13.3□□□□□ -0.28
CTPS1-202ENST00000372621 ASNSD1Q9NWL6 643 aa13.3□□□□□ -0.28
CTPS1-202ENST00000372621 A0A0G2JND7 137 aa13.3□□□□□ -0.28
CTPS1-202ENST00000372621 KLF11O14901 512 aa13.3□□□□□ -0.28
CTPS1-202ENST00000372621 ENTPD5O75356 428 aa13.3□□□□□ -0.28
CTPS1-202ENST00000372621 NFICP08651 508 aa13.3□□□□□ -0.28
CTPS1-202ENST00000372621 KRT19P08727 400 aa13.3□□□□□ -0.28
CTPS1-202ENST00000372621 RXRBP28702 533 aa13.3□□□□□ -0.28
CTPS1-202ENST00000372621 HSDL1Q3SXM5 330 aa13.3□□□□□ -0.28
CTPS1-202ENST00000372621 RAB6CQ53S08 254 aa13.3□□□□□ -0.28
CTPS1-202ENST00000372621 ANGEL2Q5VTE6 544 aaKnown RBP13.3□□□□□ -0.28
CTPS1-202ENST00000372621 C4orf50Q6ZRC1 276 aa13.3□□□□□ -0.28
CTPS1-202ENST00000372621 CDR2LQ86X02 465 aaPredicted RBP13.3□□□□□ -0.28
CTPS1-202ENST00000372621 DHX37Q8IY37 1157 aaKnown RBP13.3□□□□□ -0.28
CTPS1-202ENST00000372621 FAM111AQ96PZ2 611 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms