RNA–Protein interactions for RNA: ENST00000372271.3

FAM78A-203, Transcript of family with sequence similarity 78 member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM78A, Length 3,966 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM78A-203ENST00000372271 C15orf59Q2T9L4 293 aaPredicted RBP13.97□□□□□ -0.17
FAM78A-203ENST00000372271 RNASEH2BQ5TBB1 312 aaKnown RBP13.97□□□□□ -0.17
FAM78A-203ENST00000372271 IER5Q5VY09 327 aa13.97□□□□□ -0.17
FAM78A-203ENST00000372271 EFCAB12Q6NXP0 572 aa13.97□□□□□ -0.17
FAM78A-203ENST00000372271 RGS9BPQ6ZS82 235 aa13.97□□□□□ -0.17
FAM78A-203ENST00000372271 ZCCHC23Q6ZST2 131 aa13.97□□□□□ -0.17
FAM78A-203ENST00000372271 INPP5DQ92835 1189 aa13.97□□□□□ -0.17
FAM78A-203ENST00000372271 SRPK1Q96SB4 655 aaKnown RBP13.97□□□□□ -0.17
FAM78A-203ENST00000372271 PRM3Q9NNZ6 103 aa13.97□□□□□ -0.17
FAM78A-203ENST00000372271 NDE1Q9NXR1 346 aa13.97□□□□□ -0.17
FAM78A-203ENST00000372271 ZNF541Q9H0D2 1346 aa13.96□□□□□ -0.17
FAM78A-203ENST00000372271 A0A0B4J269 797 aa13.96□□□□□ -0.17
FAM78A-203ENST00000372271 ASS1P00966 412 aaKnown RBP13.96□□□□□ -0.17
FAM78A-203ENST00000372271 ADORA2BP29275 332 aa13.96□□□□□ -0.17
FAM78A-203ENST00000372271 CDKN2BP42772 138 aa13.96□□□□□ -0.17
FAM78A-203ENST00000372271 TGFB2P61812 414 aa13.96□□□□□ -0.17
FAM78A-203ENST00000372271 PTPN11Q06124 597 aaPredicted RBP13.96□□□□□ -0.17
FAM78A-203ENST00000372271 PTPN20Q4JDL3 420 aa13.96□□□□□ -0.17
FAM78A-203ENST00000372271 AP1ARQ63HQ0 302 aa13.96□□□□□ -0.17
FAM78A-203ENST00000372271 SLC25A41Q8N5S1 370 aa13.96□□□□□ -0.17
FAM78A-203ENST00000372271 TEX9Q8N6V9 391 aa13.96□□□□□ -0.17
FAM78A-203ENST00000372271 CPT1BQ92523 772 aa13.96□□□□□ -0.17
FAM78A-203ENST00000372271 RNF34Q969K3 372 aa13.96□□□□□ -0.17
FAM78A-203ENST00000372271 BTBD10Q9BSF8 475 aa13.96□□□□□ -0.17
FAM78A-203ENST00000372271 SMCHD1A6NHR9 2005 aa13.96□□□□□ -0.17
FAM78A-203ENST00000372271 EIF4BP23588 611 aaKnown RBP13.96□□□□□ -0.17
FAM78A-203ENST00000372271 WNT7BP56706 349 aa13.96□□□□□ -0.17
FAM78A-203ENST00000372271 PTP4A2Q12974 167 aa13.96□□□□□ -0.17
FAM78A-203ENST00000372271 TCEAL1Q15170 157 aa13.96□□□□□ -0.17
FAM78A-203ENST00000372271 GRAMD1BQ3KR37 738 aa13.96□□□□□ -0.17
FAM78A-203ENST00000372271 B3GNT9Q6UX72 402 aa13.96□□□□□ -0.17
FAM78A-203ENST00000372271 EP400NLQ6ZTU2 488 aa13.96□□□□□ -0.17
FAM78A-203ENST00000372271 SLC26A11Q86WA9 606 aa13.96□□□□□ -0.17
FAM78A-203ENST00000372271 TFAP2BQ92481 460 aa13.96□□□□□ -0.17
FAM78A-203ENST00000372271 MTBPQ96DY7 904 aa13.96□□□□□ -0.17
FAM78A-203ENST00000372271 KIF12Q96FN5 646 aa13.96□□□□□ -0.17
FAM78A-203ENST00000372271 HPDLQ96IR7 371 aa13.96□□□□□ -0.17
FAM78A-203ENST00000372271 CLMNQ96JQ2 1002 aa13.96□□□□□ -0.17
FAM78A-203ENST00000372271 PPP1R36Q96LQ0 422 aa13.96□□□□□ -0.17
FAM78A-203ENST00000372271 FAM49AQ9H0Q0 323 aaPredicted RBP13.96□□□□□ -0.17
FAM78A-203ENST00000372271 TJP2Q9UDY2 1190 aa13.96□□□□□ -0.17
FAM78A-203ENST00000372271 RREB1Q92766 1687 aa13.96□□□□□ -0.17
FAM78A-203ENST00000372271 LCP1P13796 627 aa13.96□□□□□ -0.18
FAM78A-203ENST00000372271 KCNA3P22001 575 aa13.96□□□□□ -0.18
FAM78A-203ENST00000372271 KLRC2P26717 231 aa13.96□□□□□ -0.18
FAM78A-203ENST00000372271 AP1B1Q10567 949 aa13.96□□□□□ -0.18
FAM78A-203ENST00000372271 TMEM132BQ14DG7 1078 aa13.96□□□□□ -0.18
FAM78A-203ENST00000372271 TAF5Q15542 800 aa13.96□□□□□ -0.18
FAM78A-203ENST00000372271 FKBP1CQ5VVH2 108 aa13.96□□□□□ -0.18
FAM78A-203ENST00000372271 ABHD15Q6UXT9 468 aa13.96□□□□□ -0.18
FAM78A-203ENST00000372271 RAPH1Q70E73 1250 aa13.96□□□□□ -0.18
FAM78A-203ENST00000372271 CLNKQ7Z7G1 428 aa13.96□□□□□ -0.18
FAM78A-203ENST00000372271 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.96□□□□□ -0.18
FAM78A-203ENST00000372271 SCYL1Q96KG9 808 aa13.96□□□□□ -0.18
FAM78A-203ENST00000372271 MECRQ9BV79 373 aa13.96□□□□□ -0.18
FAM78A-203ENST00000372271 LRMDAQ9H2I8 198 aa13.96□□□□□ -0.18
FAM78A-203ENST00000372271 ACSS3Q9H6R3 686 aa13.96□□□□□ -0.18
FAM78A-203ENST00000372271 CFLARO15519 480 aa13.95□□□□□ -0.18
FAM78A-203ENST00000372271 CREB3O43889 395 aa13.95□□□□□ -0.18
FAM78A-203ENST00000372271 MYCNP04198 464 aaPredicted RBP13.95□□□□□ -0.18
FAM78A-203ENST00000372271 PGK2P07205 417 aa13.95□□□□□ -0.18
FAM78A-203ENST00000372271 TYK2P29597 1187 aa13.95□□□□□ -0.18
FAM78A-203ENST00000372271 SKIV2L2P42285 1042 aaKnown RBP13.95□□□□□ -0.18
FAM78A-203ENST00000372271 LRRC38Q5VT99 294 aa13.95□□□□□ -0.18
FAM78A-203ENST00000372271 AGAP3Q96P47 875 aa13.95□□□□□ -0.18
FAM78A-203ENST00000372271 DENND2DQ9H6A0 471 aaPredicted RBP13.95□□□□□ -0.18
FAM78A-203ENST00000372271 COL16A1Q07092 1604 aaPredicted RBP13.95□□□□□ -0.18
FAM78A-203ENST00000372271 XIRP1Q702N8 1843 aaKnown RBP13.95□□□□□ -0.18
FAM78A-203ENST00000372271 LRCH4O75427 683 aa13.95□□□□□ -0.18
FAM78A-203ENST00000372271 FAM155BO75949 473 aa13.95□□□□□ -0.18
FAM78A-203ENST00000372271 KRT36O76013 467 aa13.95□□□□□ -0.18
FAM78A-203ENST00000372271 PHKA2P46019 1235 aa13.95□□□□□ -0.18
FAM78A-203ENST00000372271 MRPS35P82673 323 aaKnown RBP13.95□□□□□ -0.18
FAM78A-203ENST00000372271 OGDHQ02218 1023 aa13.95□□□□□ -0.18
FAM78A-203ENST00000372271 FAM47CQ5HY64 1035 aa13.95□□□□□ -0.18
FAM78A-203ENST00000372271 RSPH3Q86UC2 560 aa13.95□□□□□ -0.18
FAM78A-203ENST00000372271 C7orf43Q8WVR3 580 aa13.95□□□□□ -0.18
FAM78A-203ENST00000372271 ARL8BQ9NVJ2 186 aa13.95□□□□□ -0.18
FAM78A-203ENST00000372271 PRPF4O43172 522 aaKnown RBP eCLIP13.95□□□□□ -0.18
FAM78A-203ENST00000372271 ZBTB7AO95365 584 aa13.95□□□□□ -0.18
FAM78A-203ENST00000372271 ZCCHC18P0CG32 403 aa13.95□□□□□ -0.18
FAM78A-203ENST00000372271 AP2B1P63010 937 aa13.95□□□□□ -0.18
FAM78A-203ENST00000372271 KLF1Q13351 362 aaPredicted RBP13.95□□□□□ -0.18
FAM78A-203ENST00000372271 AMHR2Q16671 573 aa13.95□□□□□ -0.18
FAM78A-203ENST00000372271 NKX1-2Q9UD57 310 aaPredicted RBP13.95□□□□□ -0.18
FAM78A-203ENST00000372271 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.94□□□□□ -0.18
FAM78A-203ENST00000372271 TCRBV9S1A1TA0A576 114 aa13.94□□□□□ -0.18
FAM78A-203ENST00000372271 CCDC78A2IDD5 438 aa13.94□□□□□ -0.18
FAM78A-203ENST00000372271 APOC4-APOC2K7ER74 178 aa13.94□□□□□ -0.18
FAM78A-203ENST00000372271 TCEA3O75764 348 aa13.94□□□□□ -0.18
FAM78A-203ENST00000372271 APOC2P02655 101 aa13.94□□□□□ -0.18
FAM78A-203ENST00000372271 PDGFRBP09619 1106 aa13.94□□□□□ -0.18
FAM78A-203ENST00000372271 RBL1P28749 1068 aa13.94□□□□□ -0.18
FAM78A-203ENST00000372271 WASHC2DQ5SRD0 308 aa13.94□□□□□ -0.18
FAM78A-203ENST00000372271 MPZL3Q6UWV2 235 aa13.94□□□□□ -0.18
FAM78A-203ENST00000372271 BBS12Q6ZW61 710 aa13.94□□□□□ -0.18
FAM78A-203ENST00000372271 TTC16Q8NEE8 873 aa13.94□□□□□ -0.18
FAM78A-203ENST00000372271 ZBTB10Q96DT7 871 aa13.94□□□□□ -0.18
FAM78A-203ENST00000372271 APOPT1Q96IL0 206 aa13.94□□□□□ -0.18
FAM78A-203ENST00000372271 LAMB2P55268 1798 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms