RNA–Protein interactions for RNA: ENST00000372216.8

COL4A6-202, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-202ENST00000372216 RPS7P62081 194 aaKnown RBP10.16□□□□□ -0.78
COL4A6-202ENST00000372216 CYTH1Q15438 398 aa10.16□□□□□ -0.78
COL4A6-202ENST00000372216 TMC7Q7Z402 723 aa10.16□□□□□ -0.78
COL4A6-202ENST00000372216 ELOA2Q8IYF1 753 aaPredicted RBP10.16□□□□□ -0.78
COL4A6-202ENST00000372216 IDI2Q9BXS1 227 aa10.16□□□□□ -0.78
COL4A6-202ENST00000372216 THAP2Q9H0W7 228 aa10.16□□□□□ -0.78
COL4A6-202ENST00000372216 TASP1Q9H6P5 420 aa10.16□□□□□ -0.78
COL4A6-202ENST00000372216 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.16□□□□□ -0.78
COL4A6-202ENST00000372216 CNTNAP2Q9UHC6 1331 aa10.16□□□□□ -0.78
COL4A6-202ENST00000372216 NBNO60934 754 aa10.16□□□□□ -0.78
COL4A6-202ENST00000372216 ENO1P06733 434 aaKnown RBP10.16□□□□□ -0.78
COL4A6-202ENST00000372216 TGFB3P10600 412 aa10.16□□□□□ -0.78
COL4A6-202ENST00000372216 GHRP10912 638 aa10.16□□□□□ -0.78
COL4A6-202ENST00000372216 UGP2Q16851 508 aa10.16□□□□□ -0.78
COL4A6-202ENST00000372216 TEX9Q8N6V9 391 aa10.16□□□□□ -0.78
COL4A6-202ENST00000372216 REPS2Q8NFH8 660 aa10.16□□□□□ -0.78
COL4A6-202ENST00000372216 SYN2Q92777 582 aaPredicted RBP10.16□□□□□ -0.78
COL4A6-202ENST00000372216 CYFIP2Q96F07 1278 aa10.16□□□□□ -0.78
COL4A6-202ENST00000372216 NSMCE4AQ9NXX6 385 aa10.16□□□□□ -0.78
COL4A6-202ENST00000372216 CRLS1Q9UJA2 301 aa10.16□□□□□ -0.78
COL4A6-202ENST00000372216 FAM32AQ9Y421 112 aaKnown RBP10.16□□□□□ -0.78
COL4A6-202ENST00000372216 TARSL2A2RTX5 802 aaKnown RBP10.15□□□□□ -0.78
COL4A6-202ENST00000372216 ITGB6P18564 788 aa10.15□□□□□ -0.78
COL4A6-202ENST00000372216 TOB1P50616 345 aaPredicted RBP10.15□□□□□ -0.78
COL4A6-202ENST00000372216 BCAT1P54687 386 aa10.15□□□□□ -0.78
COL4A6-202ENST00000372216 ZNF200P98182 395 aaPredicted RBP10.15□□□□□ -0.78
COL4A6-202ENST00000372216 BEX3Q00994 111 aa10.15□□□□□ -0.78
COL4A6-202ENST00000372216 CENPCQ03188 943 aa10.15□□□□□ -0.78
COL4A6-202ENST00000372216 CALML6Q8TD86 181 aa10.15□□□□□ -0.78
COL4A6-202ENST00000372216 ATP6V1G3Q96LB4 118 aa10.15□□□□□ -0.78
COL4A6-202ENST00000372216 CHST12Q9NRB3 414 aa10.15□□□□□ -0.78
COL4A6-202ENST00000372216 SMARCAL1Q9NZC9 954 aa10.15□□□□□ -0.78
COL4A6-202ENST00000372216 KANSL3Q9P2N6 904 aa10.15□□□□□ -0.78
COL4A6-202ENST00000372216 CFAP99D6REC4 459 aa10.15□□□□□ -0.78
COL4A6-202ENST00000372216 GYPCP04921 128 aa10.15□□□□□ -0.78
COL4A6-202ENST00000372216 PTPRAP18433 802 aa10.15□□□□□ -0.78
COL4A6-202ENST00000372216 CNTN2Q02246 1040 aa10.15□□□□□ -0.78
COL4A6-202ENST00000372216 OCA2Q04671 838 aa10.15□□□□□ -0.78
COL4A6-202ENST00000372216 PGS1Q32NB8 556 aa10.15□□□□□ -0.78
COL4A6-202ENST00000372216 IRAK1BP1Q5VVH5 260 aa10.15□□□□□ -0.78
COL4A6-202ENST00000372216 HORMAD1Q86X24 394 aa10.15□□□□□ -0.78
COL4A6-202ENST00000372216 UCMAQ8WVF2 138 aa10.15□□□□□ -0.78
COL4A6-202ENST00000372216 BCL2L14Q9BZR8 327 aa10.15□□□□□ -0.78
COL4A6-202ENST00000372216 MIR1-1HGQ9H1L0 117 aa10.15□□□□□ -0.78
COL4A6-202ENST00000372216 ABHD16BQ9H3Z7 469 aa10.15□□□□□ -0.78
COL4A6-202ENST00000372216 PCMTD2Q9NV79 361 aa10.15□□□□□ -0.78
COL4A6-202ENST00000372216 ITGA11Q9UKX5 1188 aa10.15□□□□□ -0.78
COL4A6-202ENST00000372216 SLC12A8A0AV02 714 aa10.15□□□□□ -0.78
COL4A6-202ENST00000372216 POLBP06746 335 aa10.15□□□□□ -0.78
COL4A6-202ENST00000372216 HSPA9P38646 679 aaKnown RBP10.15□□□□□ -0.78
COL4A6-202ENST00000372216 PTPAQ15257 358 aa10.15□□□□□ -0.78
COL4A6-202ENST00000372216 LONRF1Q17RB8 773 aa10.15□□□□□ -0.78
COL4A6-202ENST00000372216 IYDQ6PHW0 289 aa10.15□□□□□ -0.78
COL4A6-202ENST00000372216 DENND5BQ6ZUT9 1274 aa10.15□□□□□ -0.78
COL4A6-202ENST00000372216 ITIH5Q86UX2 942 aa10.15□□□□□ -0.78
COL4A6-202ENST00000372216 TRAPPC12Q8WVT3 735 aa10.15□□□□□ -0.78
COL4A6-202ENST00000372216 IPCEF1Q8WWN9 437 aaPredicted RBP10.15□□□□□ -0.78
COL4A6-202ENST00000372216 RNF208Q9H0X6 261 aa10.15□□□□□ -0.78
COL4A6-202ENST00000372216 GPRC5DQ9NZD1 345 aa10.15□□□□□ -0.78
COL4A6-202ENST00000372216 IPPQ9Y573 584 aa10.15□□□□□ -0.78
COL4A6-202ENST00000372216 COL3A1P02461 1466 aaPredicted RBP10.15□□□□□ -0.78
COL4A6-202ENST00000372216 FAM47E-STBD1D6RA91 191 aa10.15□□□□□ -0.78
COL4A6-202ENST00000372216 KLRC2P26717 231 aa10.15□□□□□ -0.78
COL4A6-202ENST00000372216 CCDC3Q9BQI4 270 aa10.15□□□□□ -0.78
COL4A6-202ENST00000372216 DDX43Q9NXZ2 648 aaKnown RBP10.15□□□□□ -0.78
COL4A6-202ENST00000372216 ALG6Q9Y672 507 aa10.15□□□□□ -0.78
COL4A6-202ENST00000372216 RHOBTB1O94844 696 aa10.15□□□□□ -0.79
COL4A6-202ENST00000372216 ALOX15P16050 662 aaPredicted RBP10.15□□□□□ -0.79
COL4A6-202ENST00000372216 SERPINB9P50453 376 aa10.15□□□□□ -0.79
COL4A6-202ENST00000372216 OXCT1P55809 520 aa10.15□□□□□ -0.79
COL4A6-202ENST00000372216 MYL6P60660 151 aa10.15□□□□□ -0.79
COL4A6-202ENST00000372216 PKN1Q16512 942 aa10.15□□□□□ -0.79
COL4A6-202ENST00000372216 POM121L1PQ3SYA9 428 aa10.15□□□□□ -0.79
COL4A6-202ENST00000372216 ZNF720Q7Z2F6 126 aa10.15□□□□□ -0.79
COL4A6-202ENST00000372216 BLOC1S5Q8TDH9 187 aa10.15□□□□□ -0.79
COL4A6-202ENST00000372216 DDI1Q8WTU0 396 aa10.15□□□□□ -0.79
COL4A6-202ENST00000372216 KIAA1257Q9ULG3 409 aa10.15□□□□□ -0.79
COL4A6-202ENST00000372216 TIMM13Q9Y5L4 95 aaPredicted RBP10.15□□□□□ -0.79
COL4A6-202ENST00000372216 ANGPT2O15123 496 aa10.14□□□□□ -0.79
COL4A6-202ENST00000372216 MTSS1O43312 755 aa10.14□□□□□ -0.79
COL4A6-202ENST00000372216 HPGDP15428 266 aa10.14□□□□□ -0.79
COL4A6-202ENST00000372216 PLD1Q13393 1074 aa10.14□□□□□ -0.79
COL4A6-202ENST00000372216 NAPEPLDQ6IQ20 393 aa10.14□□□□□ -0.79
COL4A6-202ENST00000372216 TRIM65Q6PJ69 517 aa10.14□□□□□ -0.79
COL4A6-202ENST00000372216 FGD2Q7Z6J4 655 aa10.14□□□□□ -0.79
COL4A6-202ENST00000372216 TMEM176AQ96HP8 235 aa10.14□□□□□ -0.79
COL4A6-202ENST00000372216 IRX2Q9BZI1 471 aaPredicted RBP10.14□□□□□ -0.79
COL4A6-202ENST00000372216 SENP6Q9GZR1 1112 aaPredicted RBP10.14□□□□□ -0.79
COL4A6-202ENST00000372216 COPS7BQ9H9Q2 264 aaPredicted RBP10.14□□□□□ -0.79
COL4A6-202ENST00000372216 NDE1Q9NXR1 346 aa10.14□□□□□ -0.79
COL4A6-202ENST00000372216 TRPV2Q9Y5S1 764 aa10.14□□□□□ -0.79
COL4A6-202ENST00000372216 FOXN3O00409 490 aaPredicted RBP10.14□□□□□ -0.79
COL4A6-202ENST00000372216 PMPCBO75439 489 aa10.14□□□□□ -0.79
COL4A6-202ENST00000372216 NFICP08651 508 aa10.14□□□□□ -0.79
COL4A6-202ENST00000372216 MYL2P10916 166 aa10.14□□□□□ -0.79
COL4A6-202ENST00000372216 PTGER2P43116 358 aa10.14□□□□□ -0.79
COL4A6-202ENST00000372216 RGS4P49798 205 aa10.14□□□□□ -0.79
COL4A6-202ENST00000372216 MRPL28Q13084 256 aaKnown RBP10.14□□□□□ -0.79
COL4A6-202ENST00000372216 BTG3Q14201 252 aaPredicted RBP10.14□□□□□ -0.79
COL4A6-202ENST00000372216 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms