RNA–Protein interactions for RNA: ENST00000372044.7

CCDC17-201, Transcript of coiled-coil domain containing 17, humanhuman

TSL 2

Gene CCDC17, Length 1,873 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC17-201ENST00000372044 IL1R2P27930 398 aa19.12■□□□□ 0.65
CCDC17-201ENST00000372044 OTOP2Q7RTS6 562 aa19.12■□□□□ 0.65
CCDC17-201ENST00000372044 SMARCD1Q96GM5 515 aa19.12■□□□□ 0.65
CCDC17-201ENST00000372044 RPGRIP1Q96KN7 1286 aa19.12■□□□□ 0.65
CCDC17-201ENST00000372044 CFAP57Q96MR6 1250 aa19.12■□□□□ 0.65
CCDC17-201ENST00000372044 COLEC11Q9BWP8 271 aa19.12■□□□□ 0.65
CCDC17-201ENST00000372044 RC3H2Q9HBD1 1191 aaKnown RBP19.12■□□□□ 0.65
CCDC17-201ENST00000372044 TTC7AQ9ULT0 858 aaPredicted RBP19.12■□□□□ 0.65
CCDC17-201ENST00000372044 PLXNA4Q9HCM2 1894 aa19.12■□□□□ 0.65
CCDC17-201ENST00000372044 PSTPIP1O43586 416 aa19.11■□□□□ 0.65
CCDC17-201ENST00000372044 TRAPPC3O43617 180 aa19.11■□□□□ 0.65
CCDC17-201ENST00000372044 TFE3P19532 575 aaPredicted RBP19.11■□□□□ 0.65
CCDC17-201ENST00000372044 SLC25A11Q02978 314 aaKnown RBP19.11■□□□□ 0.65
CCDC17-201ENST00000372044 RTP2Q5QGT7 225 aa19.11■□□□□ 0.65
CCDC17-201ENST00000372044 RHOT1Q8IXI2 618 aa19.11■□□□□ 0.65
CCDC17-201ENST00000372044 TMEM199Q8N511 208 aa19.11■□□□□ 0.65
CCDC17-201ENST00000372044 ZNF689Q96CS4 500 aaPredicted RBP19.11■□□□□ 0.65
CCDC17-201ENST00000372044 PNKPQ96T60 521 aa19.11■□□□□ 0.65
CCDC17-201ENST00000372044 TMEM175Q9BSA9 504 aa19.11■□□□□ 0.65
CCDC17-201ENST00000372044 CYLDQ9NQC7 956 aa19.11■□□□□ 0.65
CCDC17-201ENST00000372044 PLXNA3P51805 1871 aa19.11■□□□□ 0.65
CCDC17-201ENST00000372044 ARHGEF37A1IGU5 675 aa19.11■□□□□ 0.65
CCDC17-201ENST00000372044 SYN3O14994 580 aa19.11■□□□□ 0.65
CCDC17-201ENST00000372044 PDGFRAP16234 1089 aa19.11■□□□□ 0.65
CCDC17-201ENST00000372044 GPD1P21695 349 aa19.11■□□□□ 0.65
CCDC17-201ENST00000372044 FGFR3P22607 806 aa19.11■□□□□ 0.65
CCDC17-201ENST00000372044 ACADSBP45954 432 aa19.11■□□□□ 0.65
CCDC17-201ENST00000372044 ZNF143P52747 638 aaPredicted RBP19.11■□□□□ 0.65
CCDC17-201ENST00000372044 TSPY1Q01534 308 aa19.11■□□□□ 0.65
CCDC17-201ENST00000372044 CDO1Q16878 200 aa19.11■□□□□ 0.65
CCDC17-201ENST00000372044 CCDC14Q49A88 953 aa19.11■□□□□ 0.65
CCDC17-201ENST00000372044 SLC39A12Q504Y0 691 aa19.11■□□□□ 0.65
CCDC17-201ENST00000372044 MMGT1Q8N4V1 131 aa19.11■□□□□ 0.65
CCDC17-201ENST00000372044 HDAC7Q8WUI4 952 aa19.11■□□□□ 0.65
CCDC17-201ENST00000372044 KCTD13Q8WZ19 329 aa19.11■□□□□ 0.65
CCDC17-201ENST00000372044 HINFPQ9BQA5 517 aa19.11■□□□□ 0.65
CCDC17-201ENST00000372044 VN1R3Q9BXE9 311 aa19.11■□□□□ 0.65
CCDC17-201ENST00000372044 CSNK1G1Q9HCP0 422 aa19.11■□□□□ 0.65
CCDC17-201ENST00000372044 PRDM10Q9NQV6 1147 aa19.11■□□□□ 0.65
CCDC17-201ENST00000372044 MRPL58Q14197 206 aaKnown RBP19.1■□□□□ 0.65
CCDC17-201ENST00000372044 LONRF2Q1L5Z9 754 aa19.1■□□□□ 0.65
CCDC17-201ENST00000372044 SMTNL2Q2TAL5 461 aa19.1■□□□□ 0.65
CCDC17-201ENST00000372044 RSPO2Q6UXX9 243 aaPredicted RBP19.1■□□□□ 0.65
CCDC17-201ENST00000372044 SLC26A9Q7LBE3 791 aa19.1■□□□□ 0.65
CCDC17-201ENST00000372044 ANKRD7Q92527 254 aa19.1■□□□□ 0.65
CCDC17-201ENST00000372044 PEBP4Q96S96 227 aa19.1■□□□□ 0.65
CCDC17-201ENST00000372044 LRRC1Q9BTT6 524 aa19.1■□□□□ 0.65
CCDC17-201ENST00000372044 ZCWPW1Q9H0M4 648 aa19.1■□□□□ 0.65
CCDC17-201ENST00000372044 PLEKHA4Q9H4M7 779 aa19.1■□□□□ 0.65
CCDC17-201ENST00000372044 SF3B1O75533 1304 aaKnown RBP eCLIP19.1■□□□□ 0.65
CCDC17-201ENST00000372044 PI4K2BG5E9Z4 385 aa19.09■□□□□ 0.65
CCDC17-201ENST00000372044 CYP2F1P24903 491 aa19.09■□□□□ 0.65
CCDC17-201ENST00000372044 TKTL1P51854 596 aa19.09■□□□□ 0.65
CCDC17-201ENST00000372044 SLC8A3P57103 927 aa19.09■□□□□ 0.65
CCDC17-201ENST00000372044 ATP11AP98196 1134 aa19.09■□□□□ 0.65
CCDC17-201ENST00000372044 RAB41Q5JT25 222 aa19.09■□□□□ 0.65
CCDC17-201ENST00000372044 SEL1L2Q5TEA6 688 aa19.09■□□□□ 0.65
CCDC17-201ENST00000372044 HFE2Q6ZVN8 426 aa19.09■□□□□ 0.65
CCDC17-201ENST00000372044 ZDHHC17Q8IUH5 632 aa19.09■□□□□ 0.65
CCDC17-201ENST00000372044 LRRC4Q9HBW1 653 aa19.09■□□□□ 0.65
CCDC17-201ENST00000372044 IL23AQ9NPF7 189 aa19.09■□□□□ 0.65
CCDC17-201ENST00000372044 COL4A4P53420 1690 aaPredicted RBP19.09■□□□□ 0.65
CCDC17-201ENST00000372044 GBF1Q92538 1859 aa19.09■□□□□ 0.65
CCDC17-201ENST00000372044 KRIT1O00522 736 aa19.09■□□□□ 0.65
CCDC17-201ENST00000372044 EFEMP2O95967 443 aa19.09■□□□□ 0.65
CCDC17-201ENST00000372044 AMHP03971 560 aa19.09■□□□□ 0.65
CCDC17-201ENST00000372044 MIPP30301 263 aa19.09■□□□□ 0.65
CCDC17-201ENST00000372044 EPHB4P54760 987 aa19.09■□□□□ 0.65
CCDC17-201ENST00000372044 MRPS5P82675 430 aaKnown RBP19.09■□□□□ 0.65
CCDC17-201ENST00000372044 CTXN3Q4LDR2 81 aa19.09■□□□□ 0.65
CCDC17-201ENST00000372044 KCNT1Q5JUK3 1230 aa19.09■□□□□ 0.65
CCDC17-201ENST00000372044 CYP4V2Q6ZWL3 525 aaPredicted RBP19.09■□□□□ 0.65
CCDC17-201ENST00000372044 SLC13A5Q86YT5 568 aaPredicted RBP19.09■□□□□ 0.65
CCDC17-201ENST00000372044 KLHL7Q8IXQ5 586 aa19.09■□□□□ 0.65
CCDC17-201ENST00000372044 KATNAL2Q8IYT4 538 aa19.09■□□□□ 0.65
CCDC17-201ENST00000372044 GPR161Q8N6U8 529 aaKnown RBP19.09■□□□□ 0.65
CCDC17-201ENST00000372044 STKLD1Q8NE28 680 aa19.09■□□□□ 0.65
CCDC17-201ENST00000372044 BADQ92934 168 aa19.09■□□□□ 0.65
CCDC17-201ENST00000372044 PGLYRP2Q96PD5 576 aa19.09■□□□□ 0.65
CCDC17-201ENST00000372044 KRT12Q99456 494 aa19.09■□□□□ 0.65
CCDC17-201ENST00000372044 CNPY3Q9BT09 278 aa19.09■□□□□ 0.65
CCDC17-201ENST00000372044 PARD6BQ9BYG5 372 aa19.09■□□□□ 0.65
CCDC17-201ENST00000372044 ULBP1Q9BZM6 244 aa19.09■□□□□ 0.65
CCDC17-201ENST00000372044 DDX47Q9H0S4 455 aaKnown RBP19.09■□□□□ 0.65
CCDC17-201ENST00000372044 ZWILCHQ9H900 591 aa19.09■□□□□ 0.65
CCDC17-201ENST00000372044 CALCOCO1Q9P1Z2 691 aa19.09■□□□□ 0.65
CCDC17-201ENST00000372044 PCSK1NQ9UHG2 260 aa19.09■□□□□ 0.65
CCDC17-201ENST00000372044 SNX16P57768 344 aa19.08■□□□□ 0.65
CCDC17-201ENST00000372044 SLC7A5Q01650 507 aa19.08■□□□□ 0.65
CCDC17-201ENST00000372044 SIX1Q15475 284 aaPredicted RBP19.08■□□□□ 0.65
CCDC17-201ENST00000372044 TTC9BQ8N6N2 239 aa19.08■□□□□ 0.65
CCDC17-201ENST00000372044 UBE2Q2Q8WVN8 375 aa19.08■□□□□ 0.65
CCDC17-201ENST00000372044 RAPGEF5Q92565 580 aa19.08■□□□□ 0.65
CCDC17-201ENST00000372044 RNF25Q96BH1 459 aaPredicted RBP19.08■□□□□ 0.65
CCDC17-201ENST00000372044 SBDSQ9Y3A5 250 aaKnown RBP eCLIP19.08■□□□□ 0.65
CCDC17-201ENST00000372044 DPYSL4O14531 572 aa19.07■□□□□ 0.64
CCDC17-201ENST00000372044 USP17L7P0C7H9 530 aa19.07■□□□□ 0.64
CCDC17-201ENST00000372044 ALDH7A1P49419 539 aaKnown RBP19.07■□□□□ 0.64
CCDC17-201ENST00000372044 ATXN1P54253 815 aaKnown RBP19.07■□□□□ 0.64
CCDC17-201ENST00000372044 PITX1P78337 314 aaPredicted RBP19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms