RNA–Protein interactions for RNA: ENST00000371817.7

COL5A1-201, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL5A1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-201ENST00000371817 PER1O15534 1290 aaPredicted RBP15.77■□□□□ 0.12
COL5A1-201ENST00000371817 ZNF224Q9NZL3 707 aa15.77■□□□□ 0.12
COL5A1-201ENST00000371817 SLC15A2Q16348 729 aa15.77■□□□□ 0.11
COL5A1-201ENST00000371817 GSTA3Q16772 222 aa15.77■□□□□ 0.11
COL5A1-201ENST00000371817 ATPAF2Q8N5M1 289 aa15.77■□□□□ 0.11
COL5A1-201ENST00000371817 ACAP1Q15027 740 aa15.77■□□□□ 0.11
COL5A1-201ENST00000371817 FBXO42Q6P3S6 717 aa15.77■□□□□ 0.11
COL5A1-201ENST00000371817 TOPORSQ9NS56 1045 aaPredicted RBP15.77■□□□□ 0.11
COL5A1-201ENST00000371817 NUDT5Q9UKK9 219 aa15.77■□□□□ 0.11
COL5A1-201ENST00000371817 SYNMO15061 1565 aa15.77■□□□□ 0.11
COL5A1-201ENST00000371817 SOAT2O75908 522 aa15.77■□□□□ 0.11
COL5A1-201ENST00000371817 TSPAN19P0C672 248 aa15.77■□□□□ 0.11
COL5A1-201ENST00000371817 PTDSS1P48651 473 aaKnown RBP15.77■□□□□ 0.11
COL5A1-201ENST00000371817 AGPAT5Q9NUQ2 364 aa15.77■□□□□ 0.11
COL5A1-201ENST00000371817 PLEKHG1Q9ULL1 1385 aa15.77■□□□□ 0.11
COL5A1-201ENST00000371817 KATNA1O75449 491 aa15.76■□□□□ 0.11
COL5A1-201ENST00000371817 SPIRE1Q08AE8 756 aa15.76■□□□□ 0.11
COL5A1-201ENST00000371817 MYBPC2Q14324 1141 aa15.76■□□□□ 0.11
COL5A1-201ENST00000371817 ULK3Q6PHR2 472 aa15.76■□□□□ 0.11
COL5A1-201ENST00000371817 TRPC4APQ8TEL6 797 aa15.76■□□□□ 0.11
COL5A1-201ENST00000371817 DLG3Q92796 817 aa15.76■□□□□ 0.11
COL5A1-201ENST00000371817 CHMP1AQ9HD42 196 aaPredicted RBP15.76■□□□□ 0.11
COL5A1-201ENST00000371817 TRNAU1APQ9NX07 287 aaKnown RBP15.76■□□□□ 0.11
COL5A1-201ENST00000371817 GALNT8Q9NY28 637 aa15.76■□□□□ 0.11
COL5A1-201ENST00000371817 L1RE1Q9UN81 338 aa15.76■□□□□ 0.11
COL5A1-201ENST00000371817 SLC12A4Q9UP95 1085 aa15.76■□□□□ 0.11
COL5A1-201ENST00000371817 CITO14578 2027 aa15.76■□□□□ 0.11
COL5A1-201ENST00000371817 A0A1W2PQJ5 194 aa15.76■□□□□ 0.11
COL5A1-201ENST00000371817 KPNA5O15131 536 aa15.76■□□□□ 0.11
COL5A1-201ENST00000371817 EIF2AK2P19525 551 aaKnown RBP15.76■□□□□ 0.11
COL5A1-201ENST00000371817 ITGA3P26006 1051 aa15.76■□□□□ 0.11
COL5A1-201ENST00000371817 GRSF1Q12849 480 aaKnown RBP eCLIP15.76■□□□□ 0.11
COL5A1-201ENST00000371817 PYDC2Q56P42 97 aa15.76■□□□□ 0.11
COL5A1-201ENST00000371817 OLFML2AQ68BL7 652 aa15.76■□□□□ 0.11
COL5A1-201ENST00000371817 RBM44Q6ZP01 1051 aaKnown RBP15.76■□□□□ 0.11
COL5A1-201ENST00000371817 SLC30A5Q8TAD4 765 aa15.76■□□□□ 0.11
COL5A1-201ENST00000371817 MCEEQ96PE7 176 aa15.76■□□□□ 0.11
COL5A1-201ENST00000371817 SIK2Q9H0K1 926 aa15.76■□□□□ 0.11
COL5A1-201ENST00000371817 TEX14Q8IWB6 1497 aa15.76■□□□□ 0.11
COL5A1-201ENST00000371817 HAT1O14929 419 aa15.76■□□□□ 0.11
COL5A1-201ENST00000371817 ADAM17P78536 824 aa15.76■□□□□ 0.11
COL5A1-201ENST00000371817 CBX3Q13185 183 aa15.76■□□□□ 0.11
COL5A1-201ENST00000371817 DGCR6Q14129 220 aa15.76■□□□□ 0.11
COL5A1-201ENST00000371817 NRF1Q16656 503 aa15.76■□□□□ 0.11
COL5A1-201ENST00000371817 UBE2SQ16763 222 aa15.76■□□□□ 0.11
COL5A1-201ENST00000371817 UGT3A1Q6NUS8 523 aa15.76■□□□□ 0.11
COL5A1-201ENST00000371817 LARGE2Q8N3Y3 721 aa15.76■□□□□ 0.11
COL5A1-201ENST00000371817 ANKS1AQ92625 1134 aa15.76■□□□□ 0.11
COL5A1-201ENST00000371817 PDS5AQ29RF7 1337 aaKnown RBP15.76■□□□□ 0.11
COL5A1-201ENST00000371817 CNTFP26441 200 aa15.76■□□□□ 0.11
COL5A1-201ENST00000371817 SSTR3P32745 418 aaPredicted RBP15.76■□□□□ 0.11
COL5A1-201ENST00000371817 COILP38432 576 aaPredicted RBP15.76■□□□□ 0.11
COL5A1-201ENST00000371817 TC2NQ8N9U0 490 aa15.76■□□□□ 0.11
COL5A1-201ENST00000371817 SCFD2Q8WU76 684 aa15.76■□□□□ 0.11
COL5A1-201ENST00000371817 CAVIN3Q969G5 261 aa15.76■□□□□ 0.11
COL5A1-201ENST00000371817 MTG1Q9BT17 334 aaPredicted RBP15.76■□□□□ 0.11
COL5A1-201ENST00000371817 SLC7A5P2Q9GIP4 190 aa15.76■□□□□ 0.11
COL5A1-201ENST00000371817 LRFN2Q9ULH4 789 aa15.76■□□□□ 0.11
COL5A1-201ENST00000371817 PCDHB8Q9UN66 801 aa15.76■□□□□ 0.11
COL5A1-201ENST00000371817 PLCL2Q9UPR0 1127 aa15.76■□□□□ 0.11
COL5A1-201ENST00000371817 ELF3P78545 371 aaPredicted RBP15.76■□□□□ 0.11
COL5A1-201ENST00000371817 USP13Q92995 863 aaPredicted RBP15.76■□□□□ 0.11
COL5A1-201ENST00000371817 C12orf4Q9NQ89 552 aa15.76■□□□□ 0.11
COL5A1-201ENST00000371817 BSDC1Q9NW68 430 aaPredicted RBP15.76■□□□□ 0.11
COL5A1-201ENST00000371817 PAICSP22234 425 aaKnown RBP15.76■□□□□ 0.11
COL5A1-201ENST00000371817 MAPK10P53779 464 aa15.76■□□□□ 0.11
COL5A1-201ENST00000371817 GADL1Q6ZQY3 521 aa15.76■□□□□ 0.11
COL5A1-201ENST00000371817 APBB2Q92870 758 aa15.76■□□□□ 0.11
COL5A1-201ENST00000371817 SEPHS2Q99611 448 aa15.76■□□□□ 0.11
COL5A1-201ENST00000371817 EPB41L1Q9H4G0 881 aa15.76■□□□□ 0.11
COL5A1-201ENST00000371817 TCF4P15884 667 aa15.76■□□□□ 0.11
COL5A1-201ENST00000371817 RAB2AP61019 212 aa15.76■□□□□ 0.11
COL5A1-201ENST00000371817 CCNA1P78396 465 aa15.76■□□□□ 0.11
COL5A1-201ENST00000371817 BROXQ5VW32 411 aa15.76■□□□□ 0.11
COL5A1-201ENST00000371817 UGT2B28Q9BY64 529 aa15.76■□□□□ 0.11
COL5A1-201ENST00000371817 BCL2L14Q9BZR8 327 aa15.76■□□□□ 0.11
COL5A1-201ENST00000371817 TMEM117Q9H0C3 514 aa15.76■□□□□ 0.11
COL5A1-201ENST00000371817 VPS9D1Q9Y2B5 631 aa15.76■□□□□ 0.11
COL5A1-201ENST00000371817 RBMX2Q9Y388 322 aaKnown RBP15.76■□□□□ 0.11
COL5A1-201ENST00000371817 ABLIM1O14639 778 aa15.75■□□□□ 0.11
COL5A1-201ENST00000371817 HS6ST1O60243 411 aa15.75■□□□□ 0.11
COL5A1-201ENST00000371817 ALDH1B1P30837 517 aa15.75■□□□□ 0.11
COL5A1-201ENST00000371817 DUOXA2Q1HG44 320 aa15.75■□□□□ 0.11
COL5A1-201ENST00000371817 SYDE2Q5VT97 1194 aa15.75■□□□□ 0.11
COL5A1-201ENST00000371817 PJA1Q8NG27 643 aa15.75■□□□□ 0.11
COL5A1-201ENST00000371817 ZNF671Q8TAW3 534 aa15.75■□□□□ 0.11
COL5A1-201ENST00000371817 SLC9A7Q96T83 725 aa15.75■□□□□ 0.11
COL5A1-201ENST00000371817 DMTF1Q9Y222 760 aa15.75■□□□□ 0.11
COL5A1-201ENST00000371817 CD3EAPO15446 510 aaKnown RBP15.75■□□□□ 0.11
COL5A1-201ENST00000371817 GUCA1AP43080 201 aaPredicted RBP15.75■□□□□ 0.11
COL5A1-201ENST00000371817 BICRALQ6AI39 1079 aa15.75■□□□□ 0.11
COL5A1-201ENST00000371817 LINC00523Q86TU6 105 aa15.75■□□□□ 0.11
COL5A1-201ENST00000371817 DHFR2Q86XF0 187 aa15.75■□□□□ 0.11
COL5A1-201ENST00000371817 GGA2Q9UJY4 613 aa15.75■□□□□ 0.11
COL5A1-201ENST00000371817 SNX8Q9Y5X2 465 aa15.75■□□□□ 0.11
COL5A1-201ENST00000371817 ADORA1P30542 326 aa15.75■□□□□ 0.11
COL5A1-201ENST00000371817 RPL5P46777 297 aaKnown RBP15.75■□□□□ 0.11
COL5A1-201ENST00000371817 NT5C2P49902 561 aa15.75■□□□□ 0.11
COL5A1-201ENST00000371817 RPS8P62241 208 aaKnown RBP15.75■□□□□ 0.11
COL5A1-201ENST00000371817 NECAB2Q7Z6G3 386 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms