RNA–Protein interactions for RNA: ENST00000371447.3

PDE6C-201, Transcript of phosphodiesterase 6C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE6C, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6C-201ENST00000371447 MNAT1P51948 309 aa12.29□□□□□ -0.44
PDE6C-201ENST00000371447 LMNB2Q03252 620 aa12.29□□□□□ -0.44
PDE6C-201ENST00000371447 PPP1R15BQ5SWA1 713 aa12.29□□□□□ -0.44
PDE6C-201ENST00000371447 TTC30AQ86WT1 665 aa12.29□□□□□ -0.44
PDE6C-201ENST00000371447 KIF2BQ8N4N8 673 aa12.29□□□□□ -0.44
PDE6C-201ENST00000371447 CCDC110Q8TBZ0 833 aa12.29□□□□□ -0.44
PDE6C-201ENST00000371447 ASNSD1Q9NWL6 643 aa12.29□□□□□ -0.44
PDE6C-201ENST00000371447 SEPT10Q9P0V9 454 aa12.29□□□□□ -0.44
PDE6C-201ENST00000371447 SMIM10L2AP0DMW4 78 aa12.29□□□□□ -0.44
PDE6C-201ENST00000371447 SMIM10L2BP0DMW5 78 aa12.29□□□□□ -0.44
PDE6C-201ENST00000371447 SDC4P31431 198 aa12.29□□□□□ -0.44
PDE6C-201ENST00000371447 FAM131BQ86XD5 332 aa12.29□□□□□ -0.44
PDE6C-201ENST00000371447 ZCCHC9Q8N567 271 aaKnown RBP12.29□□□□□ -0.44
PDE6C-201ENST00000371447 FAF2Q96CS3 445 aa12.29□□□□□ -0.44
PDE6C-201ENST00000371447 MS4A4AQ96JQ5 239 aa12.29□□□□□ -0.44
PDE6C-201ENST00000371447 GCOM2Q9BZD3 368 aaPredicted RBP12.29□□□□□ -0.44
PDE6C-201ENST00000371447 ZNF518BQ9C0D4 1074 aa12.29□□□□□ -0.44
PDE6C-201ENST00000371447 RRAGCQ9HB90 399 aa12.29□□□□□ -0.44
PDE6C-201ENST00000371447 DDX56Q9NY93 547 aaKnown RBP12.29□□□□□ -0.44
PDE6C-201ENST00000371447 GJD2Q9UKL4 321 aa12.29□□□□□ -0.44
PDE6C-201ENST00000371447 PCDHGC3Q9UN70 934 aa12.29□□□□□ -0.44
PDE6C-201ENST00000371447 LCTP09848 1927 aa12.29□□□□□ -0.44
PDE6C-201ENST00000371447 PAPPA2Q9BXP8 1791 aa12.29□□□□□ -0.44
PDE6C-201ENST00000371447 GLTPD2A6NH11 291 aa12.29□□□□□ -0.44
PDE6C-201ENST00000371447 CDH16O75309 829 aa12.29□□□□□ -0.44
PDE6C-201ENST00000371447 TMEM63AO94886 807 aa12.29□□□□□ -0.44
PDE6C-201ENST00000371447 VDRP11473 427 aa12.29□□□□□ -0.44
PDE6C-201ENST00000371447 HOXA11P31270 313 aaPredicted RBP12.29□□□□□ -0.44
PDE6C-201ENST00000371447 NME3Q13232 169 aa12.29□□□□□ -0.44
PDE6C-201ENST00000371447 HIC1Q14526 733 aa12.29□□□□□ -0.44
PDE6C-201ENST00000371447 PPP1R21Q6ZMI0 780 aa12.29□□□□□ -0.44
PDE6C-201ENST00000371447 PLEKHH3Q7Z736 793 aa12.29□□□□□ -0.44
PDE6C-201ENST00000371447 TBC1D1Q86TI0 1168 aaPredicted RBP12.29□□□□□ -0.44
PDE6C-201ENST00000371447 PYROXD2Q8N2H3 581 aa12.29□□□□□ -0.44
PDE6C-201ENST00000371447 FBF1Q8TES7 1133 aa12.29□□□□□ -0.44
PDE6C-201ENST00000371447 SERPINB12Q96P63 405 aa12.29□□□□□ -0.44
PDE6C-201ENST00000371447 BCO2Q9BYV7 579 aa12.29□□□□□ -0.44
PDE6C-201ENST00000371447 TRABDQ9H4I3 376 aa12.29□□□□□ -0.44
PDE6C-201ENST00000371447 GBA2Q9HCG7 927 aaPredicted RBP12.29□□□□□ -0.44
PDE6C-201ENST00000371447 MFHAS1Q9Y4C4 1052 aa12.29□□□□□ -0.44
PDE6C-201ENST00000371447 A0A1B0GUA9 196 aa12.28□□□□□ -0.44
PDE6C-201ENST00000371447 TRUB2O95900 331 aaKnown RBP12.28□□□□□ -0.44
PDE6C-201ENST00000371447 KRT4P19013 534 aa12.28□□□□□ -0.44
PDE6C-201ENST00000371447 AFF1P51825 1210 aaKnown RBP12.28□□□□□ -0.44
PDE6C-201ENST00000371447 BCAR1P56945 870 aa12.28□□□□□ -0.44
PDE6C-201ENST00000371447 SYDE1Q6ZW31 735 aaPredicted RBP12.28□□□□□ -0.44
PDE6C-201ENST00000371447 BBOF1Q8ND07 529 aa12.28□□□□□ -0.44
PDE6C-201ENST00000371447 SLC2A14Q8TDB8 520 aa12.28□□□□□ -0.44
PDE6C-201ENST00000371447 HASPINQ8TF76 798 aa12.28□□□□□ -0.44
PDE6C-201ENST00000371447 CPT1BQ92523 772 aa12.28□□□□□ -0.44
PDE6C-201ENST00000371447 ZNF317Q96PQ6 595 aaPredicted RBP12.28□□□□□ -0.44
PDE6C-201ENST00000371447 STK38LQ9Y2H1 464 aa12.28□□□□□ -0.44
PDE6C-201ENST00000371447 I3L4J1 428 aa12.28□□□□□ -0.44
PDE6C-201ENST00000371447 FAM155BO75949 473 aa12.28□□□□□ -0.44
PDE6C-201ENST00000371447 RBL1P28749 1068 aa12.28□□□□□ -0.44
PDE6C-201ENST00000371447 HUNKP57058 714 aa12.28□□□□□ -0.44
PDE6C-201ENST00000371447 IRX4P78413 519 aa12.28□□□□□ -0.44
PDE6C-201ENST00000371447 ACTN3Q08043 901 aaPredicted RBP12.28□□□□□ -0.44
PDE6C-201ENST00000371447 OASLQ15646 514 aaKnown RBP12.28□□□□□ -0.44
PDE6C-201ENST00000371447 LDLRAD1Q5T700 205 aa12.28□□□□□ -0.44
PDE6C-201ENST00000371447 OLFML2BQ68BL8 750 aa12.28□□□□□ -0.44
PDE6C-201ENST00000371447 TLK2Q86UE8 772 aa12.28□□□□□ -0.44
PDE6C-201ENST00000371447 ASB7Q9H672 318 aa12.28□□□□□ -0.44
PDE6C-201ENST00000371447 VTA1Q9NP79 307 aa12.28□□□□□ -0.44
PDE6C-201ENST00000371447 FLRT1Q9NZU1 646 aa12.28□□□□□ -0.44
PDE6C-201ENST00000371447 NME7Q9Y5B8 376 aa12.28□□□□□ -0.44
PDE6C-201ENST00000371447 PARP14Q460N5 1801 aa12.28□□□□□ -0.44
PDE6C-201ENST00000371447 E2F8A0AVK6 867 aa12.27□□□□□ -0.44
PDE6C-201ENST00000371447 SPTLC1O15269 473 aa12.27□□□□□ -0.44
PDE6C-201ENST00000371447 CREB3O43889 395 aa12.27□□□□□ -0.44
PDE6C-201ENST00000371447 F7P08709 466 aaPredicted RBP12.27□□□□□ -0.44
PDE6C-201ENST00000371447 C6orf222P0C671 652 aaPredicted RBP12.27□□□□□ -0.44
PDE6C-201ENST00000371447 RPA3P35244 121 aaPredicted RBP12.27□□□□□ -0.44
PDE6C-201ENST00000371447 GTF2A2P52657 109 aa12.27□□□□□ -0.44
PDE6C-201ENST00000371447 ROR1Q01973 937 aa12.27□□□□□ -0.44
PDE6C-201ENST00000371447 OVGP1Q12889 678 aa12.27□□□□□ -0.44
PDE6C-201ENST00000371447 DUSP28Q4G0W2 176 aa12.27□□□□□ -0.44
PDE6C-201ENST00000371447 RNASEH2BQ5TBB1 312 aaKnown RBP12.27□□□□□ -0.44
PDE6C-201ENST00000371447 CASC4Q6P4E1 433 aa12.27□□□□□ -0.44
PDE6C-201ENST00000371447 IGDCC3Q8IVU1 814 aa12.27□□□□□ -0.44
PDE6C-201ENST00000371447 SLCO2A1Q92959 643 aa12.27□□□□□ -0.44
PDE6C-201ENST00000371447 LPPQ93052 612 aa12.27□□□□□ -0.44
PDE6C-201ENST00000371447 PGLYRP2Q96PD5 576 aa12.27□□□□□ -0.44
PDE6C-201ENST00000371447 LBHD1Q9BQE6 289 aaPredicted RBP12.27□□□□□ -0.44
PDE6C-201ENST00000371447 SNX25Q9H3E2 840 aa12.27□□□□□ -0.44
PDE6C-201ENST00000371447 RGPD3A6NKT7 1758 aaPredicted RBP12.27□□□□□ -0.45
PDE6C-201ENST00000371447 RGPD4Q7Z3J3 1758 aa12.27□□□□□ -0.45
PDE6C-201ENST00000371447 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.27□□□□□ -0.45
PDE6C-201ENST00000371447 C3orf70A6NLC5 250 aaPredicted RBP12.27□□□□□ -0.45
PDE6C-201ENST00000371447 YY1P25490 414 aa12.27□□□□□ -0.45
PDE6C-201ENST00000371447 CRADDP78560 199 aa12.27□□□□□ -0.45
PDE6C-201ENST00000371447 CAV1Q03135 178 aa12.27□□□□□ -0.45
PDE6C-201ENST00000371447 CCDC14Q49A88 953 aa12.27□□□□□ -0.45
PDE6C-201ENST00000371447 SMC6Q96SB8 1091 aa12.27□□□□□ -0.45
PDE6C-201ENST00000371447 MED10Q9BTT4 135 aa12.27□□□□□ -0.45
PDE6C-201ENST00000371447 ROPN1BQ9BZX4 212 aaPredicted RBP12.27□□□□□ -0.45
PDE6C-201ENST00000371447 ABHD16BQ9H3Z7 469 aa12.27□□□□□ -0.45
PDE6C-201ENST00000371447 ROPN1Q9HAT0 212 aaPredicted RBP12.27□□□□□ -0.45
PDE6C-201ENST00000371447 TRIM33Q9UPN9 1127 aa12.27□□□□□ -0.45
PDE6C-201ENST00000371447 PDE4DIPQ5VU43 2346 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms