RNA–Protein interactions for RNA: ENST00000370848.8

SS18L1-202, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best) BASIC

Gene SS18L1, Length 1,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-202ENST00000370848 MYRFLQ96LU7 910 aa16.13■□□□□ 0.17
SS18L1-202ENST00000370848 TWNKQ96RR1 684 aa16.13■□□□□ 0.17
SS18L1-202ENST00000370848 HINFPQ9BQA5 517 aa16.13■□□□□ 0.17
SS18L1-202ENST00000370848 SLC46A2Q9BY10 475 aa16.13■□□□□ 0.17
SS18L1-202ENST00000370848 NIF3L1Q9GZT8 377 aa16.13■□□□□ 0.17
SS18L1-202ENST00000370848 KIF9Q9HAQ2 790 aa16.13■□□□□ 0.17
SS18L1-202ENST00000370848 METTL14Q9HCE5 456 aaKnown RBP16.13■□□□□ 0.17
SS18L1-202ENST00000370848 RAB20Q9NX57 234 aa16.13■□□□□ 0.17
SS18L1-202ENST00000370848 MED19A0JLT2 244 aaPredicted RBP16.12■□□□□ 0.17
SS18L1-202ENST00000370848 SLC38A8A6NNN8 435 aa16.12■□□□□ 0.17
SS18L1-202ENST00000370848 CLDN5O00501 218 aa16.12■□□□□ 0.17
SS18L1-202ENST00000370848 STX10O60499 249 aa16.12■□□□□ 0.17
SS18L1-202ENST00000370848 PTPN1P18031 435 aaKnown RBP16.12■□□□□ 0.17
SS18L1-202ENST00000370848 BDNFP23560 247 aa16.12■□□□□ 0.17
SS18L1-202ENST00000370848 FMO5P49326 533 aa16.12■□□□□ 0.17
SS18L1-202ENST00000370848 NDST1P52848 882 aa16.12■□□□□ 0.17
SS18L1-202ENST00000370848 CACNA2D1P54289 1103 aa16.12■□□□□ 0.17
SS18L1-202ENST00000370848 CYP27A1Q02318 531 aa16.12■□□□□ 0.17
SS18L1-202ENST00000370848 CFAP221Q4G0U5 840 aa16.12■□□□□ 0.17
SS18L1-202ENST00000370848 TRIM59Q8IWR1 403 aa16.12■□□□□ 0.17
SS18L1-202ENST00000370848 TATDN2Q93075 761 aa16.12■□□□□ 0.17
SS18L1-202ENST00000370848 CHFRQ96EP1 664 aa16.12■□□□□ 0.17
SS18L1-202ENST00000370848 ARID3AQ99856 593 aa16.12■□□□□ 0.17
SS18L1-202ENST00000370848 IMPG2Q9BZV3 1241 aa16.12■□□□□ 0.17
SS18L1-202ENST00000370848 TMEM30AQ9NV96 361 aa16.12■□□□□ 0.17
SS18L1-202ENST00000370848 GTSE1Q9NYZ3 720 aa16.12■□□□□ 0.17
SS18L1-202ENST00000370848 GREB1Q4ZG55 1949 aa16.11■□□□□ 0.17
SS18L1-202ENST00000370848 CCDC163A0A0D9SF12 145 aa16.11■□□□□ 0.17
SS18L1-202ENST00000370848 DPYSL4O14531 572 aa16.11■□□□□ 0.17
SS18L1-202ENST00000370848 TADA3O75528 432 aa16.11■□□□□ 0.17
SS18L1-202ENST00000370848 NOL4O94818 638 aa16.11■□□□□ 0.17
SS18L1-202ENST00000370848 MBD3O95983 291 aa16.11■□□□□ 0.17
SS18L1-202ENST00000370848 RETP07949 1114 aa16.11■□□□□ 0.17
SS18L1-202ENST00000370848 FAM163BP0C2L3 166 aa16.11■□□□□ 0.17
SS18L1-202ENST00000370848 P4HA1P13674 534 aa16.11■□□□□ 0.17
SS18L1-202ENST00000370848 CD58P19256 250 aa16.11■□□□□ 0.17
SS18L1-202ENST00000370848 SOX9P48436 509 aa16.11■□□□□ 0.17
SS18L1-202ENST00000370848 KPNA1P52294 538 aaPredicted RBP16.11■□□□□ 0.17
SS18L1-202ENST00000370848 CYP4F8P98187 520 aa16.11■□□□□ 0.17
SS18L1-202ENST00000370848 RSPO4Q2I0M5 234 aaPredicted RBP16.11■□□□□ 0.17
SS18L1-202ENST00000370848 ITPRIPL2Q3MIP1 535 aa16.11■□□□□ 0.17
SS18L1-202ENST00000370848 ACOT1Q86TX2 421 aa16.11■□□□□ 0.17
SS18L1-202ENST00000370848 LONP2Q86WA8 852 aa16.11■□□□□ 0.17
SS18L1-202ENST00000370848 IRF2BP1Q8IU81 584 aa16.11■□□□□ 0.17
SS18L1-202ENST00000370848 SCN4BQ8IWT1 228 aa16.11■□□□□ 0.17
SS18L1-202ENST00000370848 B3GALNT2Q8NCR0 500 aa16.11■□□□□ 0.17
SS18L1-202ENST00000370848 MYCBPAPQ8TBZ2 947 aa16.11■□□□□ 0.17
SS18L1-202ENST00000370848 FUBP3Q96I24 572 aaKnown RBP eCLIP16.11■□□□□ 0.17
SS18L1-202ENST00000370848 CNOT6LQ96LI5 555 aaKnown RBP16.11■□□□□ 0.17
SS18L1-202ENST00000370848 CEP295NLQ96MC4 621 aa16.11■□□□□ 0.17
SS18L1-202ENST00000370848 GCNAQ96QF7 691 aa16.11■□□□□ 0.17
SS18L1-202ENST00000370848 B3GNT5Q9BYG0 378 aa16.11■□□□□ 0.17
SS18L1-202ENST00000370848 ZNF518BQ9C0D4 1074 aa16.11■□□□□ 0.17
SS18L1-202ENST00000370848 PARD6AQ9NPB6 346 aa16.11■□□□□ 0.17
SS18L1-202ENST00000370848 TMEM63CQ9P1W3 806 aa16.11■□□□□ 0.17
SS18L1-202ENST00000370848 COQ4Q9Y3A0 265 aa16.11■□□□□ 0.17
SS18L1-202ENST00000370848 PTPRDP23468 1912 aa16.11■□□□□ 0.17
SS18L1-202ENST00000370848 KIAA1549LQ6ZVL6 1849 aa16.1■□□□□ 0.17
SS18L1-202ENST00000370848 ANAPC1Q9H1A4 1944 aa16.1■□□□□ 0.17
SS18L1-202ENST00000370848 CSH1P0DML2 217 aa16.1■□□□□ 0.17
SS18L1-202ENST00000370848 CSH2P0DML3 217 aa16.1■□□□□ 0.17
SS18L1-202ENST00000370848 TCF3P15923 654 aa16.1■□□□□ 0.17
SS18L1-202ENST00000370848 MARSP56192 900 aaKnown RBP16.1■□□□□ 0.17
SS18L1-202ENST00000370848 LRMPQ12912 555 aa16.1■□□□□ 0.17
SS18L1-202ENST00000370848 HSP90AA4PQ58FG1 418 aa16.1■□□□□ 0.17
SS18L1-202ENST00000370848 TMEM196Q5HYL7 178 aa16.1■□□□□ 0.17
SS18L1-202ENST00000370848 C4orf50Q6ZRC1 276 aa16.1■□□□□ 0.17
SS18L1-202ENST00000370848 Q6ZS52 159 aa16.1■□□□□ 0.17
SS18L1-202ENST00000370848 WHAMMQ8TF30 809 aa16.1■□□□□ 0.17
SS18L1-202ENST00000370848 USP13Q92995 863 aaPredicted RBP16.1■□□□□ 0.17
SS18L1-202ENST00000370848 ZFYVE19Q96K21 471 aa16.1■□□□□ 0.17
SS18L1-202ENST00000370848 HPS4Q9NQG7 708 aa16.1■□□□□ 0.17
SS18L1-202ENST00000370848 RBM12Q9NTZ6 932 aaKnown RBP16.1■□□□□ 0.17
SS18L1-202ENST00000370848 THG1LQ9NWX6 298 aaKnown RBP16.1■□□□□ 0.17
SS18L1-202ENST00000370848 MAGEC2Q9UBF1 373 aaPredicted RBP16.1■□□□□ 0.17
SS18L1-202ENST00000370848 GMEB2Q9UKD1 530 aa16.1■□□□□ 0.17
SS18L1-202ENST00000370848 TRDMT1O14717 391 aaKnown RBP16.09■□□□□ 0.17
SS18L1-202ENST00000370848 GNA14O95837 355 aa16.09■□□□□ 0.17
SS18L1-202ENST00000370848 CCDC130P13994 396 aa16.09■□□□□ 0.17
SS18L1-202ENST00000370848 TNK2Q07912 1038 aa16.09■□□□□ 0.17
SS18L1-202ENST00000370848 INCA1Q0VD86 236 aa16.09■□□□□ 0.17
SS18L1-202ENST00000370848 KCNH2Q12809 1159 aa16.09■□□□□ 0.17
SS18L1-202ENST00000370848 CCDC183Q5T5S1 534 aa16.09■□□□□ 0.17
SS18L1-202ENST00000370848 C11orf57Q6ZUT1 292 aaPredicted RBP16.09■□□□□ 0.17
SS18L1-202ENST00000370848 PAQR9Q6ZVX9 377 aa16.09■□□□□ 0.17
SS18L1-202ENST00000370848 MON1AQ86VX9 555 aa16.09■□□□□ 0.17
SS18L1-202ENST00000370848 WDR5BQ86VZ2 330 aa16.09■□□□□ 0.17
SS18L1-202ENST00000370848 CREBRFQ8IUR6 639 aa16.09■□□□□ 0.17
SS18L1-202ENST00000370848 CCDC150Q8NCX0 1101 aa16.09■□□□□ 0.17
SS18L1-202ENST00000370848 RIN3Q8TB24 985 aa16.09■□□□□ 0.17
SS18L1-202ENST00000370848 RTKNQ9BST9 563 aa16.09■□□□□ 0.17
SS18L1-202ENST00000370848 ELOVL4Q9GZR5 314 aa16.09■□□□□ 0.17
SS18L1-202ENST00000370848 FAM49BQ9NUQ9 324 aa16.09■□□□□ 0.17
SS18L1-202ENST00000370848 TDP1Q9NUW8 608 aa16.09■□□□□ 0.17
SS18L1-202ENST00000370848 UXTQ9UBK9 157 aaPredicted RBP16.09■□□□□ 0.17
SS18L1-202ENST00000370848 MAGED2Q9UNF1 606 aaPredicted RBP16.09■□□□□ 0.17
SS18L1-202ENST00000370848 HELZP42694 1942 aaKnown RBP16.09■□□□□ 0.17
SS18L1-202ENST00000370848 KMT2BQ9UMN6 2715 aaPredicted RBP16.08■□□□□ 0.16
SS18L1-202ENST00000370848 CHURC1-FNTBB4DL54 471 aa16.08■□□□□ 0.16
SS18L1-202ENST00000370848 HRO43593 1189 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms