RNA–Protein interactions for RNA: ENST00000370828.3

GPC4-201, Transcript of glypican 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC4, Length 4,960 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4-201ENST00000370828 EIF3DO15371 548 aaKnown RBP eCLIP13.14□□□□□ -0.31
GPC4-201ENST00000370828 PIAS1O75925 651 aa13.14□□□□□ -0.31
GPC4-201ENST00000370828 GH1P01241 217 aa13.14□□□□□ -0.31
GPC4-201ENST00000370828 RECQLP46063 649 aaPredicted RBP13.14□□□□□ -0.31
GPC4-201ENST00000370828 PKNOX1P55347 436 aa13.14□□□□□ -0.31
GPC4-201ENST00000370828 PDIA6Q15084 440 aa13.14□□□□□ -0.31
GPC4-201ENST00000370828 ECHDC2Q86YB7 292 aa13.14□□□□□ -0.31
GPC4-201ENST00000370828 TSPAN14Q8NG11 270 aa13.14□□□□□ -0.31
GPC4-201ENST00000370828 SH3TC2Q8TF17 1288 aa13.14□□□□□ -0.31
GPC4-201ENST00000370828 GABBR1Q9UBS5 961 aa13.14□□□□□ -0.31
GPC4-201ENST00000370828 DOLKQ9UPQ8 538 aa13.14□□□□□ -0.31
GPC4-201ENST00000370828 SETD1BQ9UPS6 1966 aaKnown RBP13.14□□□□□ -0.31
GPC4-201ENST00000370828 F5H6K3 240 aa13.14□□□□□ -0.31
GPC4-201ENST00000370828 CLOCKO15516 846 aa13.14□□□□□ -0.31
GPC4-201ENST00000370828 MED24O75448 989 aa13.14□□□□□ -0.31
GPC4-201ENST00000370828 HLA-DRAP01903 254 aa13.14□□□□□ -0.31
GPC4-201ENST00000370828 PTGS2P35354 604 aa13.14□□□□□ -0.31
GPC4-201ENST00000370828 NME5P56597 212 aa13.14□□□□□ -0.31
GPC4-201ENST00000370828 ABCE1P61221 599 aaKnown RBP13.14□□□□□ -0.31
GPC4-201ENST00000370828 KLRC3Q07444 240 aa13.14□□□□□ -0.31
GPC4-201ENST00000370828 ANGPT1Q15389 498 aa13.14□□□□□ -0.31
GPC4-201ENST00000370828 RGS21Q2M5E4 152 aa13.14□□□□□ -0.31
GPC4-201ENST00000370828 FUT11Q495W5 492 aa13.14□□□□□ -0.31
GPC4-201ENST00000370828 ZC3H12BQ5HYM0 836 aaKnown RBP13.14□□□□□ -0.31
GPC4-201ENST00000370828 GALNT6Q8NCL4 622 aa13.14□□□□□ -0.31
GPC4-201ENST00000370828 NEUROG2Q9H2A3 272 aa13.14□□□□□ -0.31
GPC4-201ENST00000370828 DENND2DQ9H6A0 471 aaPredicted RBP13.14□□□□□ -0.31
GPC4-201ENST00000370828 MAD2L2Q9UI95 211 aa13.14□□□□□ -0.31
GPC4-201ENST00000370828 TSC22D2O75157 780 aa13.14□□□□□ -0.31
GPC4-201ENST00000370828 GZMAP12544 262 aa13.14□□□□□ -0.31
GPC4-201ENST00000370828 GRK2P25098 689 aa13.14□□□□□ -0.31
GPC4-201ENST00000370828 RUNX1T1Q06455 604 aa13.14□□□□□ -0.31
GPC4-201ENST00000370828 CYP2R1Q6VVX0 501 aa13.14□□□□□ -0.31
GPC4-201ENST00000370828 ANKRD23Q86SG2 305 aa13.14□□□□□ -0.31
GPC4-201ENST00000370828 POLR3FQ9H1D9 316 aaPredicted RBP13.14□□□□□ -0.31
GPC4-201ENST00000370828 CIDEBQ9UHD4 219 aa13.14□□□□□ -0.31
GPC4-201ENST00000370828 AK5Q9Y6K8 562 aa13.14□□□□□ -0.31
GPC4-201ENST00000370828 NEO1Q92859 1461 aa13.14□□□□□ -0.31
GPC4-201ENST00000370828 DNALI1O14645 258 aaPredicted RBP13.13□□□□□ -0.31
GPC4-201ENST00000370828 CCNCP24863 283 aa13.13□□□□□ -0.31
GPC4-201ENST00000370828 RGS7P49802 495 aa13.13□□□□□ -0.31
GPC4-201ENST00000370828 GPC3P51654 580 aa13.13□□□□□ -0.31
GPC4-201ENST00000370828 MAB21L3Q8N8X9 362 aa13.13□□□□□ -0.31
GPC4-201ENST00000370828 VMP1Q96GC9 406 aa13.13□□□□□ -0.31
GPC4-201ENST00000370828 APOPT1Q96IL0 206 aa13.13□□□□□ -0.31
GPC4-201ENST00000370828 C8orf37Q96NL8 207 aa13.13□□□□□ -0.31
GPC4-201ENST00000370828 NUDT12Q9BQG2 462 aa13.13□□□□□ -0.31
GPC4-201ENST00000370828 MRPS26Q9BYN8 205 aaKnown RBP13.13□□□□□ -0.31
GPC4-201ENST00000370828 TMEM8AQ9HCN3 771 aa13.13□□□□□ -0.31
GPC4-201ENST00000370828 RBMX2Q9Y388 322 aaKnown RBP13.13□□□□□ -0.31
GPC4-201ENST00000370828 A0A087WXM4 84 aa13.13□□□□□ -0.31
GPC4-201ENST00000370828 SEMA3DO95025 777 aa13.13□□□□□ -0.31
GPC4-201ENST00000370828 CCND2P30279 289 aa13.13□□□□□ -0.31
GPC4-201ENST00000370828 CHKAP35790 457 aa13.13□□□□□ -0.31
GPC4-201ENST00000370828 NR1H2P55055 460 aa13.13□□□□□ -0.31
GPC4-201ENST00000370828 FAAP100Q0VG06 881 aa13.13□□□□□ -0.31
GPC4-201ENST00000370828 NME3Q13232 169 aa13.13□□□□□ -0.31
GPC4-201ENST00000370828 SEC23AQ15436 765 aa13.13□□□□□ -0.31
GPC4-201ENST00000370828 PDK4Q16654 411 aa13.13□□□□□ -0.31
GPC4-201ENST00000370828 SEL1L3Q68CR1 1132 aa13.13□□□□□ -0.31
GPC4-201ENST00000370828 UCMAQ8WVF2 138 aa13.13□□□□□ -0.31
GPC4-201ENST00000370828 ZNF512BQ96KM6 892 aaPredicted RBP13.13□□□□□ -0.31
GPC4-201ENST00000370828 UBE2OQ9C0C9 1292 aaKnown RBP13.13□□□□□ -0.31
GPC4-201ENST00000370828 RSAD1Q9HA92 442 aa13.13□□□□□ -0.31
GPC4-201ENST00000370828 CD209Q9NNX6 404 aa13.13□□□□□ -0.31
GPC4-201ENST00000370828 SELENONQ9NZV5 590 aa13.13□□□□□ -0.31
GPC4-201ENST00000370828 NRXN1Q9ULB1 1477 aa13.13□□□□□ -0.31
GPC4-201ENST00000370828 ZNF263O14978 683 aa13.13□□□□□ -0.31
GPC4-201ENST00000370828 NBNO60934 754 aa13.13□□□□□ -0.31
GPC4-201ENST00000370828 POLBP06746 335 aa13.13□□□□□ -0.31
GPC4-201ENST00000370828 ELK3P41970 407 aa13.13□□□□□ -0.31
GPC4-201ENST00000370828 ZNF543Q08ER8 600 aa13.13□□□□□ -0.31
GPC4-201ENST00000370828 TMEM179Q6ZVK1 233 aa13.13□□□□□ -0.31
GPC4-201ENST00000370828 BBS5Q8N3I7 341 aa13.13□□□□□ -0.31
GPC4-201ENST00000370828 ELMO2Q96JJ3 720 aa13.13□□□□□ -0.31
GPC4-201ENST00000370828 VPS33BQ9H267 617 aa13.13□□□□□ -0.31
GPC4-201ENST00000370828 MBD2Q9UBB5 411 aa13.13□□□□□ -0.31
GPC4-201ENST00000370828 MYO5CQ9NQX4 1742 aa13.13□□□□□ -0.31
GPC4-201ENST00000370828 PHGDHO43175 533 aaKnown RBP13.13□□□□□ -0.31
GPC4-201ENST00000370828 ZMPSTE24O75844 475 aa13.13□□□□□ -0.31
GPC4-201ENST00000370828 NELFEP18615 380 aaKnown RBP13.13□□□□□ -0.31
GPC4-201ENST00000370828 GTF2H1P32780 548 aa13.13□□□□□ -0.31
GPC4-201ENST00000370828 GLRBP48167 497 aa13.13□□□□□ -0.31
GPC4-201ENST00000370828 FOLH1Q04609 750 aa13.13□□□□□ -0.31
GPC4-201ENST00000370828 ITGA9Q13797 1035 aa13.13□□□□□ -0.31
GPC4-201ENST00000370828 NR1D2Q14995 579 aa13.13□□□□□ -0.31
GPC4-201ENST00000370828 WDR72Q3MJ13 1102 aa13.13□□□□□ -0.31
GPC4-201ENST00000370828 TJAP1Q5JTD0 557 aa13.13□□□□□ -0.31
GPC4-201ENST00000370828 TBCELQ5QJ74 424 aa13.13□□□□□ -0.31
GPC4-201ENST00000370828 TMEM63BQ5T3F8 832 aa13.13□□□□□ -0.31
GPC4-201ENST00000370828 LPCAT4Q643R3 524 aa13.13□□□□□ -0.31
GPC4-201ENST00000370828 GPAT2Q6NUI2 795 aa13.13□□□□□ -0.31
GPC4-201ENST00000370828 SWSAP1Q6NVH7 229 aa13.13□□□□□ -0.31
GPC4-201ENST00000370828 P3H2Q8IVL5 708 aa13.13□□□□□ -0.31
GPC4-201ENST00000370828 PRELID2Q8N945 189 aa13.13□□□□□ -0.31
GPC4-201ENST00000370828 DAGLBQ8NCG7 672 aa13.13□□□□□ -0.31
GPC4-201ENST00000370828 BAP1Q92560 729 aa13.13□□□□□ -0.31
GPC4-201ENST00000370828 PLEKHG4BQ96PX9 1271 aa13.13□□□□□ -0.31
GPC4-201ENST00000370828 HSD3B7Q9H2F3 369 aa13.13□□□□□ -0.31
GPC4-201ENST00000370828 DBNDD1Q9H9R9 158 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms