RNA–Protein interactions for RNA: ENST00000370021.1

PRPF38B-201, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best) BASIC

Gene PRPF38B, Length 3,728 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-201ENST00000370021 NAT14Q8WUY8 206 aa10.84□□□□□ -0.67
PRPF38B-201ENST00000370021 CCT7Q99832 543 aa10.84□□□□□ -0.67
PRPF38B-201ENST00000370021 CEP41Q9BYV8 373 aa10.84□□□□□ -0.67
PRPF38B-201ENST00000370021 GABBR1Q9UBS5 961 aa10.84□□□□□ -0.67
PRPF38B-201ENST00000370021 SLC24A2Q9UI40 661 aa10.84□□□□□ -0.67
PRPF38B-201ENST00000370021 TBX20Q9UMR3 447 aa10.84□□□□□ -0.67
PRPF38B-201ENST00000370021 TPST1O60507 370 aa10.84□□□□□ -0.67
PRPF38B-201ENST00000370021 FOXD2O60548 495 aaPredicted RBP10.84□□□□□ -0.67
PRPF38B-201ENST00000370021 SNRPAP09012 282 aaKnown RBP10.84□□□□□ -0.67
PRPF38B-201ENST00000370021 GMPRP36959 345 aa10.84□□□□□ -0.67
PRPF38B-201ENST00000370021 NPTX2P47972 431 aa10.84□□□□□ -0.67
PRPF38B-201ENST00000370021 FOLH1Q04609 750 aa10.84□□□□□ -0.67
PRPF38B-201ENST00000370021 PPIDQ08752 370 aaKnown RBP10.84□□□□□ -0.67
PRPF38B-201ENST00000370021 MMRN1Q13201 1228 aa10.84□□□□□ -0.67
PRPF38B-201ENST00000370021 ART3Q13508 389 aa10.84□□□□□ -0.67
PRPF38B-201ENST00000370021 PDK1Q15118 436 aa10.84□□□□□ -0.67
PRPF38B-201ENST00000370021 OASLQ15646 514 aaKnown RBP10.84□□□□□ -0.67
PRPF38B-201ENST00000370021 TFDP3Q5H9I0 405 aa10.84□□□□□ -0.67
PRPF38B-201ENST00000370021 LRRC8BQ6P9F7 803 aa10.84□□□□□ -0.67
PRPF38B-201ENST00000370021 EXD1Q8NHP7 514 aa10.84□□□□□ -0.67
PRPF38B-201ENST00000370021 VTI1AQ96AJ9 217 aa10.84□□□□□ -0.67
PRPF38B-201ENST00000370021 LENG9Q96B70 501 aa10.84□□□□□ -0.67
PRPF38B-201ENST00000370021 BORCS6Q96GS4 357 aa10.84□□□□□ -0.67
PRPF38B-201ENST00000370021 SCYL1Q96KG9 808 aa10.84□□□□□ -0.67
PRPF38B-201ENST00000370021 MSTO1Q9BUK6 570 aa10.84□□□□□ -0.67
PRPF38B-201ENST00000370021 FAM192AQ9GZU8 254 aa10.84□□□□□ -0.67
PRPF38B-201ENST00000370021 TRPV6Q9H1D0 765 aa10.84□□□□□ -0.67
PRPF38B-201ENST00000370021 RAVER2Q9HCJ3 691 aaKnown RBP10.84□□□□□ -0.67
PRPF38B-201ENST00000370021 SOX13Q9UN79 622 aa10.84□□□□□ -0.67
PRPF38B-201ENST00000370021 ARHGAP26Q9UNA1 814 aa10.84□□□□□ -0.67
PRPF38B-201ENST00000370021 ACTL7BQ9Y614 415 aa10.84□□□□□ -0.67
PRPF38B-201ENST00000370021 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.84□□□□□ -0.67
PRPF38B-201ENST00000370021 KRT38O76015 456 aa10.84□□□□□ -0.67
PRPF38B-201ENST00000370021 CSPG5O95196 566 aa10.84□□□□□ -0.67
PRPF38B-201ENST00000370021 SRGAP2CP0DJJ0 459 aa10.84□□□□□ -0.67
PRPF38B-201ENST00000370021 SRGAP2BP0DMP2 458 aa10.84□□□□□ -0.67
PRPF38B-201ENST00000370021 CDK7P50613 346 aa10.84□□□□□ -0.67
PRPF38B-201ENST00000370021 GPX6P59796 221 aa10.84□□□□□ -0.67
PRPF38B-201ENST00000370021 BMT2Q1RMZ1 405 aa10.84□□□□□ -0.67
PRPF38B-201ENST00000370021 ANO4Q32M45 955 aa10.84□□□□□ -0.67
PRPF38B-201ENST00000370021 ADAM32Q8TC27 787 aa10.84□□□□□ -0.67
PRPF38B-201ENST00000370021 DCAF4Q8WV16 495 aa10.84□□□□□ -0.67
PRPF38B-201ENST00000370021 CD101Q93033 1021 aa10.84□□□□□ -0.67
PRPF38B-201ENST00000370021 RBAKQ9NYW8 714 aaPredicted RBP10.84□□□□□ -0.67
PRPF38B-201ENST00000370021 RABGEF1Q9UJ41 708 aa10.84□□□□□ -0.67
PRPF38B-201ENST00000370021 GINS2Q9Y248 185 aa10.84□□□□□ -0.67
PRPF38B-201ENST00000370021 KDM4FA0A1W2PPD8 638 aa10.83□□□□□ -0.68
PRPF38B-201ENST00000370021 TCRBV9S1A1TA0A576 114 aa10.83□□□□□ -0.68
PRPF38B-201ENST00000370021 K7ERI5 159 aa10.83□□□□□ -0.68
PRPF38B-201ENST00000370021 CD48P09326 243 aa10.83□□□□□ -0.68
PRPF38B-201ENST00000370021 RFC1P35251 1148 aaPredicted RBP10.83□□□□□ -0.68
PRPF38B-201ENST00000370021 RARRES1P49788 294 aa10.83□□□□□ -0.68
PRPF38B-201ENST00000370021 CCR3P51677 355 aa10.83□□□□□ -0.68
PRPF38B-201ENST00000370021 TBL3Q12788 808 aaKnown RBP10.83□□□□□ -0.68
PRPF38B-201ENST00000370021 PRKG1Q13976 671 aa10.83□□□□□ -0.68
PRPF38B-201ENST00000370021 Q4G0T1 1027 aa10.83□□□□□ -0.68
PRPF38B-201ENST00000370021 SLC44A4Q53GD3 710 aa10.83□□□□□ -0.68
PRPF38B-201ENST00000370021 OR6B2Q6IFH4 312 aa10.83□□□□□ -0.68
PRPF38B-201ENST00000370021 DHDDSQ86SQ9 333 aa10.83□□□□□ -0.68
PRPF38B-201ENST00000370021 LDHDQ86WU2 507 aa10.83□□□□□ -0.68
PRPF38B-201ENST00000370021 GPD1LQ8N335 351 aa10.83□□□□□ -0.68
PRPF38B-201ENST00000370021 TTLL6Q8N841 843 aa10.83□□□□□ -0.68
PRPF38B-201ENST00000370021 TMEM35BQ8NCS4 154 aa10.83□□□□□ -0.68
PRPF38B-201ENST00000370021 LMO3Q8TAP4 145 aa10.83□□□□□ -0.68
PRPF38B-201ENST00000370021 EME1Q96AY2 570 aa10.83□□□□□ -0.68
PRPF38B-201ENST00000370021 MARK4Q96L34 752 aa10.83□□□□□ -0.68
PRPF38B-201ENST00000370021 ARHGEF38Q9NXL2 777 aa10.83□□□□□ -0.68
PRPF38B-201ENST00000370021 UMODL1Q5DID0 1318 aa10.83□□□□□ -0.68
PRPF38B-201ENST00000370021 CASQ2O14958 399 aaPredicted RBP10.83□□□□□ -0.68
PRPF38B-201ENST00000370021 ALOX15BO15296 676 aa10.83□□□□□ -0.68
PRPF38B-201ENST00000370021 PRPF4O43172 522 aaKnown RBP eCLIP10.83□□□□□ -0.68
PRPF38B-201ENST00000370021 ZNF189O75820 626 aaPredicted RBP10.83□□□□□ -0.68
PRPF38B-201ENST00000370021 RARBP10826 455 aa10.83□□□□□ -0.68
PRPF38B-201ENST00000370021 TYK2P29597 1187 aa10.83□□□□□ -0.68
PRPF38B-201ENST00000370021 NCKAP1LP55160 1127 aa10.83□□□□□ -0.68
PRPF38B-201ENST00000370021 MAP7D1Q3KQU3 841 aa10.83□□□□□ -0.68
PRPF38B-201ENST00000370021 ARHGEF16Q5VV41 709 aa10.83□□□□□ -0.68
PRPF38B-201ENST00000370021 DAW1Q8N136 415 aa10.83□□□□□ -0.68
PRPF38B-201ENST00000370021 HELQQ8TDG4 1101 aa10.83□□□□□ -0.68
PRPF38B-201ENST00000370021 ITFG2Q969R8 447 aa10.83□□□□□ -0.68
PRPF38B-201ENST00000370021 ALKBH8Q96BT7 664 aaKnown RBP10.83□□□□□ -0.68
PRPF38B-201ENST00000370021 SLITRK1Q96PX8 696 aa10.83□□□□□ -0.68
PRPF38B-201ENST00000370021 TARS2Q9BW92 718 aaKnown RBP10.83□□□□□ -0.68
PRPF38B-201ENST00000370021 NR2E3Q9Y5X4 410 aa10.83□□□□□ -0.68
PRPF38B-201ENST00000370021 A8MXQ7 604 aa10.83□□□□□ -0.68
PRPF38B-201ENST00000370021 RPS6P62753 249 aaKnown RBP10.83□□□□□ -0.68
PRPF38B-201ENST00000370021 FSTL1Q12841 308 aa10.83□□□□□ -0.68
PRPF38B-201ENST00000370021 CDHR3Q6ZTQ4 885 aa10.83□□□□□ -0.68
PRPF38B-201ENST00000370021 TMEM179Q6ZVK1 233 aa10.83□□□□□ -0.68
PRPF38B-201ENST00000370021 TRIM42Q8IWZ5 723 aa10.83□□□□□ -0.68
PRPF38B-201ENST00000370021 ARL10Q8N8L6 244 aa10.83□□□□□ -0.68
PRPF38B-201ENST00000370021 CCNYQ8ND76 341 aa10.83□□□□□ -0.68
PRPF38B-201ENST00000370021 DENND1AQ8TEH3 1009 aa10.83□□□□□ -0.68
PRPF38B-201ENST00000370021 CHURC1Q8WUH1 139 aa10.83□□□□□ -0.68
PRPF38B-201ENST00000370021 AGAP3Q96P47 875 aa10.83□□□□□ -0.68
PRPF38B-201ENST00000370021 HEMK1Q9Y5R4 338 aaPredicted RBP10.83□□□□□ -0.68
PRPF38B-201ENST00000370021 TAF1P21675 1872 aa10.83□□□□□ -0.68
PRPF38B-201ENST00000370021 C15orf38-AP3S2A0A0A6YYH1 394 aa10.82□□□□□ -0.68
PRPF38B-201ENST00000370021 TM9SF1O15321 606 aa10.82□□□□□ -0.68
PRPF38B-201ENST00000370021 MT-CO1P00395 513 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms