RNA–Protein interactions for RNA: ENST00000369733.7

COL17A1-202, Transcript of collagen type XVII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL17A1, Length 5,488 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-202ENST00000369733 DCAF6Q58WW2 860 aa16.48■□□□□ 0.23
COL17A1-202ENST00000369733 PLEKHA7Q6IQ23 1121 aa16.48■□□□□ 0.23
COL17A1-202ENST00000369733 SHCBP1Q8NEM2 672 aa16.48■□□□□ 0.23
COL17A1-202ENST00000369733 ZNF23P17027 643 aa16.48■□□□□ 0.23
COL17A1-202ENST00000369733 GSTT1P30711 240 aa16.48■□□□□ 0.23
COL17A1-202ENST00000369733 CCDC81Q6ZN84 652 aa16.48■□□□□ 0.23
COL17A1-202ENST00000369733 POU5F2Q8N7G0 328 aa16.48■□□□□ 0.23
COL17A1-202ENST00000369733 LPAR1Q92633 364 aa16.48■□□□□ 0.23
COL17A1-202ENST00000369733 SPON2Q9BUD6 331 aa16.48■□□□□ 0.23
COL17A1-202ENST00000369733 PCYOX1Q9UHG3 505 aa16.48■□□□□ 0.23
COL17A1-202ENST00000369733 MROH7Q68CQ1 1323 aa16.48■□□□□ 0.23
COL17A1-202ENST00000369733 MYL3P08590 195 aa16.48■□□□□ 0.23
COL17A1-202ENST00000369733 ACADSBP45954 432 aa16.48■□□□□ 0.23
COL17A1-202ENST00000369733 PPIDQ08752 370 aaKnown RBP16.48■□□□□ 0.23
COL17A1-202ENST00000369733 ORC1Q13415 861 aa16.48■□□□□ 0.23
COL17A1-202ENST00000369733 GLIS3Q8NEA6 775 aa16.48■□□□□ 0.23
COL17A1-202ENST00000369733 FAR2Q96K12 515 aa16.48■□□□□ 0.23
COL17A1-202ENST00000369733 SH3GL2Q99962 352 aa16.48■□□□□ 0.23
COL17A1-202ENST00000369733 BTBD7Q9P203 1132 aa16.48■□□□□ 0.23
COL17A1-202ENST00000369733 ADGRA2Q96PE1 1338 aa16.48■□□□□ 0.23
COL17A1-202ENST00000369733 HNRNPRO43390 633 aaKnown RBP16.47■□□□□ 0.23
COL17A1-202ENST00000369733 GARTP22102 1010 aa16.47■□□□□ 0.23
COL17A1-202ENST00000369733 HNRNPH3P31942 346 aaKnown RBP16.47■□□□□ 0.23
COL17A1-202ENST00000369733 CCDC15Q0P6D6 951 aa16.47■□□□□ 0.23
COL17A1-202ENST00000369733 IL17AQ16552 155 aa16.47■□□□□ 0.23
COL17A1-202ENST00000369733 ZC3H12BQ5HYM0 836 aaKnown RBP16.47■□□□□ 0.23
COL17A1-202ENST00000369733 STRIP1Q5VSL9 837 aa16.47■□□□□ 0.23
COL17A1-202ENST00000369733 LRRC55Q6ZSA7 311 aa16.47■□□□□ 0.23
COL17A1-202ENST00000369733 SV2AQ7L0J3 742 aa16.47■□□□□ 0.23
COL17A1-202ENST00000369733 CCDC33Q8N5R6 958 aa16.47■□□□□ 0.23
COL17A1-202ENST00000369733 AFG1LQ8WV93 481 aa16.47■□□□□ 0.23
COL17A1-202ENST00000369733 THAP1Q9NVV9 213 aa16.47■□□□□ 0.23
COL17A1-202ENST00000369733 USP18Q9UMW8 372 aa16.47■□□□□ 0.23
COL17A1-202ENST00000369733 MROH2AA6NES4 1674 aa16.47■□□□□ 0.23
COL17A1-202ENST00000369733 C1orf167Q5SNV9 1468 aa16.47■□□□□ 0.23
COL17A1-202ENST00000369733 MRPL28Q13084 256 aaKnown RBP16.47■□□□□ 0.23
COL17A1-202ENST00000369733 SPDYAQ5MJ70 313 aa16.47■□□□□ 0.23
COL17A1-202ENST00000369733 ABRAQ8N0Z2 381 aa16.47■□□□□ 0.23
COL17A1-202ENST00000369733 DIS3LQ8TF46 1054 aaKnown RBP16.47■□□□□ 0.23
COL17A1-202ENST00000369733 CRAMP1Q96RY5 1269 aa16.47■□□□□ 0.23
COL17A1-202ENST00000369733 TEX12Q9BXU0 123 aa16.47■□□□□ 0.23
COL17A1-202ENST00000369733 GPATCH2LQ9NWQ4 482 aa16.47■□□□□ 0.23
COL17A1-202ENST00000369733 TIMM44O43615 452 aa16.47■□□□□ 0.23
COL17A1-202ENST00000369733 ENTPD5O75356 428 aa16.47■□□□□ 0.23
COL17A1-202ENST00000369733 GLRBP48167 497 aa16.47■□□□□ 0.23
COL17A1-202ENST00000369733 N4BP2L1Q5TBK1 243 aaPredicted RBP16.47■□□□□ 0.23
COL17A1-202ENST00000369733 DUPD1Q68J44 220 aa16.47■□□□□ 0.23
COL17A1-202ENST00000369733 DENND1BQ6P3S1 775 aa16.47■□□□□ 0.23
COL17A1-202ENST00000369733 RDM1Q8NG50 284 aa16.47■□□□□ 0.23
COL17A1-202ENST00000369733 SPATA20Q8TB22 786 aa16.47■□□□□ 0.23
COL17A1-202ENST00000369733 SLC7A14Q8TBB6 771 aa16.47■□□□□ 0.23
COL17A1-202ENST00000369733 SCFD2Q8WU76 684 aa16.47■□□□□ 0.23
COL17A1-202ENST00000369733 HPDLQ96IR7 371 aa16.47■□□□□ 0.23
COL17A1-202ENST00000369733 DNPEPQ9ULA0 475 aa16.47■□□□□ 0.23
COL17A1-202ENST00000369733 ZNF263O14978 683 aa16.47■□□□□ 0.23
COL17A1-202ENST00000369733 MTSS1O43312 755 aa16.47■□□□□ 0.23
COL17A1-202ENST00000369733 C1QBPQ07021 282 aaKnown RBP16.47■□□□□ 0.23
COL17A1-202ENST00000369733 ANO4Q32M45 955 aa16.47■□□□□ 0.23
COL17A1-202ENST00000369733 FUT11Q495W5 492 aa16.47■□□□□ 0.23
COL17A1-202ENST00000369733 INPP4AQ96PE3 977 aaPredicted RBP16.47■□□□□ 0.23
COL17A1-202ENST00000369733 TAS2R14Q9NYV8 317 aa16.47■□□□□ 0.23
COL17A1-202ENST00000369733 LRFN2Q9ULH4 789 aa16.47■□□□□ 0.23
COL17A1-202ENST00000369733 SMNDC1O75940 238 aaKnown RBP eCLIP16.46■□□□□ 0.23
COL17A1-202ENST00000369733 LSM8O95777 96 aaKnown RBP16.46■□□□□ 0.23
COL17A1-202ENST00000369733 KRT72Q14CN4 511 aa16.46■□□□□ 0.23
COL17A1-202ENST00000369733 TKFCQ3LXA3 575 aa16.46■□□□□ 0.23
COL17A1-202ENST00000369733 KIAA1841Q6NSI8 718 aa16.46■□□□□ 0.23
COL17A1-202ENST00000369733 SEPT1Q8WYJ6 367 aa16.46■□□□□ 0.23
COL17A1-202ENST00000369733 MTMR12Q9C0I1 747 aa16.46■□□□□ 0.23
COL17A1-202ENST00000369733 KBTBD13C9JR72 458 aa16.46■□□□□ 0.23
COL17A1-202ENST00000369733 ZSCAN9O15535 394 aaPredicted RBP16.46■□□□□ 0.23
COL17A1-202ENST00000369733 DLGAP3O95886 979 aa16.46■□□□□ 0.23
COL17A1-202ENST00000369733 NOP9Q86U38 636 aaKnown RBP16.46■□□□□ 0.23
COL17A1-202ENST00000369733 TAAR1Q96RJ0 339 aa16.46■□□□□ 0.23
COL17A1-202ENST00000369733 KLHL25Q9H0H3 589 aa16.46■□□□□ 0.23
COL17A1-202ENST00000369733 GANQ9H2C0 597 aa16.46■□□□□ 0.23
COL17A1-202ENST00000369733 MAFGO15525 162 aa16.46■□□□□ 0.23
COL17A1-202ENST00000369733 ITGB3P05106 788 aa16.46■□□□□ 0.23
COL17A1-202ENST00000369733 HMGCS2P54868 508 aa16.46■□□□□ 0.23
COL17A1-202ENST00000369733 NCALDP61601 193 aa16.46■□□□□ 0.23
COL17A1-202ENST00000369733 CBWD6Q4V339 395 aa16.46■□□□□ 0.23
COL17A1-202ENST00000369733 CBWD3Q5JTY5 395 aa16.46■□□□□ 0.23
COL17A1-202ENST00000369733 CBWD5Q5RIA9 395 aa16.46■□□□□ 0.23
COL17A1-202ENST00000369733 PRR5LQ6MZQ0 368 aa16.46■□□□□ 0.23
COL17A1-202ENST00000369733 ETNPPLQ8TBG4 499 aa16.46■□□□□ 0.23
COL17A1-202ENST00000369733 RIC8BQ9NVN3 520 aa16.46■□□□□ 0.23
COL17A1-202ENST00000369733 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.46■□□□□ 0.23
COL17A1-202ENST00000369733 ACTL7BQ9Y614 415 aa16.46■□□□□ 0.23
COL17A1-202ENST00000369733 SERPINE1P05121 402 aa16.46■□□□□ 0.23
COL17A1-202ENST00000369733 ATP6V1C1P21283 382 aa16.46■□□□□ 0.23
COL17A1-202ENST00000369733 FAAP100Q0VG06 881 aa16.46■□□□□ 0.23
COL17A1-202ENST00000369733 STRA8Q7Z7C7 330 aa16.46■□□□□ 0.23
COL17A1-202ENST00000369733 TCF7L2Q9NQB0 619 aa16.46■□□□□ 0.23
COL17A1-202ENST00000369733 SLCO1B7G3V0H7 640 aa16.46■□□□□ 0.22
COL17A1-202ENST00000369733 FKBP9O95302 570 aa16.46■□□□□ 0.22
COL17A1-202ENST00000369733 C16orf72Q14CZ0 275 aa16.46■□□□□ 0.22
COL17A1-202ENST00000369733 FKBP9P1Q75LS8 142 aa16.46■□□□□ 0.22
COL17A1-202ENST00000369733 EXOC3L1Q86VI1 746 aa16.46■□□□□ 0.22
COL17A1-202ENST00000369733 PYDC1Q8WXC3 89 aa16.46■□□□□ 0.22
COL17A1-202ENST00000369733 ART4Q93070 314 aa16.46■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms