RNA–Protein interactions for RNA: ENST00000369409.9

PHGDH-202, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 1 (best) BASIC

Gene PHGDH, Length 1,882 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-202ENST00000369409 KHSRPQ92945 711 aaKnown RBP eCLIP17.64■□□□□ 0.41
PHGDH-202ENST00000369409 CFAP57Q96MR6 1250 aa17.64■□□□□ 0.41
PHGDH-202ENST00000369409 HINFPQ9BQA5 517 aa17.64■□□□□ 0.41
PHGDH-202ENST00000369409 ASNSD1Q9NWL6 643 aa17.64■□□□□ 0.41
PHGDH-202ENST00000369409 MARCH5Q9NX47 278 aa17.64■□□□□ 0.41
PHGDH-202ENST00000369409 PCDH10Q9P2E7 1040 aa17.64■□□□□ 0.41
PHGDH-202ENST00000369409 MYO16Q9Y6X6 1858 aa17.64■□□□□ 0.41
PHGDH-202ENST00000369409 PI4K2BG5E9Z4 385 aa17.63■□□□□ 0.41
PHGDH-202ENST00000369409 DPYSL4O14531 572 aa17.63■□□□□ 0.41
PHGDH-202ENST00000369409 SART1O43290 800 aaKnown RBP17.63■□□□□ 0.41
PHGDH-202ENST00000369409 CAPN15O75808 1086 aa17.63■□□□□ 0.41
PHGDH-202ENST00000369409 RNF8O76064 485 aa17.63■□□□□ 0.41
PHGDH-202ENST00000369409 ITGB8P26012 769 aa17.63■□□□□ 0.41
PHGDH-202ENST00000369409 PBX3P40426 434 aa17.63■□□□□ 0.41
PHGDH-202ENST00000369409 SMTNL2Q2TAL5 461 aa17.63■□□□□ 0.41
PHGDH-202ENST00000369409 GLE1Q53GS7 698 aaKnown RBP17.63■□□□□ 0.41
PHGDH-202ENST00000369409 WDR93Q6P2C0 686 aa17.63■□□□□ 0.41
PHGDH-202ENST00000369409 ZDHHC14Q8IZN3 488 aa17.63■□□□□ 0.41
PHGDH-202ENST00000369409 LRRC43Q8N309 656 aa17.63■□□□□ 0.41
PHGDH-202ENST00000369409 ZMIZ2Q8NF64 920 aa17.63■□□□□ 0.41
PHGDH-202ENST00000369409 KCTD13Q8WZ19 329 aa17.63■□□□□ 0.41
PHGDH-202ENST00000369409 RNF25Q96BH1 459 aaPredicted RBP17.63■□□□□ 0.41
PHGDH-202ENST00000369409 HERPUD2Q9BSE4 406 aa17.63■□□□□ 0.41
PHGDH-202ENST00000369409 ZWILCHQ9H900 591 aa17.63■□□□□ 0.41
PHGDH-202ENST00000369409 LRRC4Q9HBW1 653 aa17.63■□□□□ 0.41
PHGDH-202ENST00000369409 STIM2Q9P246 746 aa17.63■□□□□ 0.41
PHGDH-202ENST00000369409 PTPRSQ13332 1948 aa17.63■□□□□ 0.41
PHGDH-202ENST00000369409 ALPK3Q96L96 1907 aa17.63■□□□□ 0.41
PHGDH-202ENST00000369409 CCDC151A5D8V7 595 aa17.63■□□□□ 0.41
PHGDH-202ENST00000369409 TRIM43BA6NCK2 446 aa17.63■□□□□ 0.41
PHGDH-202ENST00000369409 HEXIM1O94992 359 aaKnown RBP17.63■□□□□ 0.41
PHGDH-202ENST00000369409 ZRANB2O95218 330 aaKnown RBP eCLIP17.63■□□□□ 0.41
PHGDH-202ENST00000369409 IL1R2P27930 398 aa17.63■□□□□ 0.41
PHGDH-202ENST00000369409 SDC4P31431 198 aa17.63■□□□□ 0.41
PHGDH-202ENST00000369409 SCNN1AP37088 669 aa17.63■□□□□ 0.41
PHGDH-202ENST00000369409 ADCY1Q08828 1119 aa17.63■□□□□ 0.41
PHGDH-202ENST00000369409 ACAP1Q15027 740 aa17.63■□□□□ 0.41
PHGDH-202ENST00000369409 BRD3Q15059 726 aa17.63■□□□□ 0.41
PHGDH-202ENST00000369409 HADHQ16836 314 aaKnown RBP17.63■□□□□ 0.41
PHGDH-202ENST00000369409 SH3PXD2AQ5TCZ1 1133 aa17.63■□□□□ 0.41
PHGDH-202ENST00000369409 POLNQ7Z5Q5 900 aa17.63■□□□□ 0.41
PHGDH-202ENST00000369409 LRRTM3Q86VH5 581 aa17.63■□□□□ 0.41
PHGDH-202ENST00000369409 SIX6OS1Q8N1H7 587 aa17.63■□□□□ 0.41
PHGDH-202ENST00000369409 PRELID2Q8N945 189 aa17.63■□□□□ 0.41
PHGDH-202ENST00000369409 TRIM43Q96BQ3 446 aaPredicted RBP17.63■□□□□ 0.41
PHGDH-202ENST00000369409 RBM41Q96IZ5 413 aaKnown RBP17.63■□□□□ 0.41
PHGDH-202ENST00000369409 KCNK16Q96T55 309 aa17.63■□□□□ 0.41
PHGDH-202ENST00000369409 SLITRK6Q9H5Y7 841 aa17.63■□□□□ 0.41
PHGDH-202ENST00000369409 PCSK1NQ9UHG2 260 aa17.63■□□□□ 0.41
PHGDH-202ENST00000369409 MTUS1Q9ULD2 1270 aa17.63■□□□□ 0.41
PHGDH-202ENST00000369409 PHF2O75151 1096 aa17.62■□□□□ 0.41
PHGDH-202ENST00000369409 TUBBP07437 444 aa17.62■□□□□ 0.41
PHGDH-202ENST00000369409 RALAP11233 206 aa17.62■□□□□ 0.41
PHGDH-202ENST00000369409 BDNFP23560 247 aa17.62■□□□□ 0.41
PHGDH-202ENST00000369409 MIPP30301 263 aa17.62■□□□□ 0.41
PHGDH-202ENST00000369409 ATP11AP98196 1134 aa17.62■□□□□ 0.41
PHGDH-202ENST00000369409 SIX1Q15475 284 aaPredicted RBP17.62■□□□□ 0.41
PHGDH-202ENST00000369409 CCDC14Q49A88 953 aa17.62■□□□□ 0.41
PHGDH-202ENST00000369409 RAB6CQ53S08 254 aa17.62■□□□□ 0.41
PHGDH-202ENST00000369409 ODF2Q5BJF6 829 aa17.62■□□□□ 0.41
PHGDH-202ENST00000369409 GPRIN1Q7Z2K8 1008 aa17.62■□□□□ 0.41
PHGDH-202ENST00000369409 ANKS1BQ7Z6G8 1248 aa17.62■□□□□ 0.41
PHGDH-202ENST00000369409 NDRG1Q92597 394 aaKnown RBP17.62■□□□□ 0.41
PHGDH-202ENST00000369409 SLITRK1Q96PX8 696 aa17.62■□□□□ 0.41
PHGDH-202ENST00000369409 COLEC11Q9BWP8 271 aa17.62■□□□□ 0.41
PHGDH-202ENST00000369409 RAB6CQ9H0N0 254 aa17.62■□□□□ 0.41
PHGDH-202ENST00000369409 DDX56Q9NY93 547 aaKnown RBP17.62■□□□□ 0.41
PHGDH-202ENST00000369409 AMACRQ9UHK6 382 aa17.62■□□□□ 0.41
PHGDH-202ENST00000369409 FAN1Q9Y2M0 1017 aa17.62■□□□□ 0.41
PHGDH-202ENST00000369409 ZSCAN5CA6NGD5 496 aaPredicted RBP17.61■□□□□ 0.41
PHGDH-202ENST00000369409 NT5C1B-RDH14C9J2C7 533 aa17.61■□□□□ 0.41
PHGDH-202ENST00000369409 FSCN2O14926 492 aa17.61■□□□□ 0.41
PHGDH-202ENST00000369409 SYN3O14994 580 aa17.61■□□□□ 0.41
PHGDH-202ENST00000369409 TIMP1P01033 207 aa17.61■□□□□ 0.41
PHGDH-202ENST00000369409 ALDH2P05091 517 aa17.61■□□□□ 0.41
PHGDH-202ENST00000369409 OR4Q2P0C623 313 aa17.61■□□□□ 0.41
PHGDH-202ENST00000369409 RARAP10276 462 aa17.61■□□□□ 0.41
PHGDH-202ENST00000369409 NDUFV1P49821 464 aa17.61■□□□□ 0.41
PHGDH-202ENST00000369409 TKTL1P51854 596 aa17.61■□□□□ 0.41
PHGDH-202ENST00000369409 MAPRE1Q15691 268 aaKnown RBP17.61■□□□□ 0.41
PHGDH-202ENST00000369409 KCNT1Q5JUK3 1230 aa17.61■□□□□ 0.41
PHGDH-202ENST00000369409 VARS2Q5ST30 1063 aaKnown RBP17.61■□□□□ 0.41
PHGDH-202ENST00000369409 FAM171A1Q5VUB5 890 aa17.61■□□□□ 0.41
PHGDH-202ENST00000369409 MFSD7Q6UXD7 560 aa17.61■□□□□ 0.41
PHGDH-202ENST00000369409 FAM149B1Q96BN6 582 aa17.61■□□□□ 0.41
PHGDH-202ENST00000369409 PEBP4Q96S96 227 aa17.61■□□□□ 0.41
PHGDH-202ENST00000369409 TMEM175Q9BSA9 504 aa17.61■□□□□ 0.41
PHGDH-202ENST00000369409 HEMGNQ9BXL5 484 aa17.61■□□□□ 0.41
PHGDH-202ENST00000369409 OSBPL8Q9BZF1 889 aa17.61■□□□□ 0.41
PHGDH-202ENST00000369409 GPR62Q9BZJ7 368 aa17.61■□□□□ 0.41
PHGDH-202ENST00000369409 NGRNQ9NPE2 291 aaKnown RBP17.61■□□□□ 0.41
PHGDH-202ENST00000369409 USP18Q9UMW8 372 aa17.61■□□□□ 0.41
PHGDH-202ENST00000369409 SF3B1O75533 1304 aaKnown RBP eCLIP17.61■□□□□ 0.413e-6■■■■■ 100.2
PHGDH-202ENST00000369409 LRRD1A4D1F6 860 aa17.61■□□□□ 0.41
PHGDH-202ENST00000369409 SEC31AO94979 1220 aaKnown RBP17.61■□□□□ 0.41
PHGDH-202ENST00000369409 OAZ2O95190 189 aa17.61■□□□□ 0.41
PHGDH-202ENST00000369409 GALTP07902 379 aa17.61■□□□□ 0.41
PHGDH-202ENST00000369409 GLI1P08151 1106 aa17.61■□□□□ 0.41
PHGDH-202ENST00000369409 KRT7P08729 469 aa17.61■□□□□ 0.41
PHGDH-202ENST00000369409 CSF2RAP15509 400 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 99.8 ms