RNA–Protein interactions for RNA: ENST00000369406.7

HMGCS2-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS2, Length 2,428 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2-201ENST00000369406 C8orf74Q6P047 294 aa14.82□□□□□ -0.04
HMGCS2-201ENST00000369406 FNIP1Q8TF40 1166 aa14.82□□□□□ -0.04
HMGCS2-201ENST00000369406 GPR62Q9BZJ7 368 aa14.82□□□□□ -0.04
HMGCS2-201ENST00000369406 ZWILCHQ9H900 591 aa14.82□□□□□ -0.04
HMGCS2-201ENST00000369406 PCSK1NQ9UHG2 260 aa14.82□□□□□ -0.04
HMGCS2-201ENST00000369406 AMACRQ9UHK6 382 aa14.82□□□□□ -0.04
HMGCS2-201ENST00000369406 CHD7Q9P2D1 2997 aa14.82□□□□□ -0.04
HMGCS2-201ENST00000369406 C3orf70A6NLC5 250 aaPredicted RBP14.81□□□□□ -0.04
HMGCS2-201ENST00000369406 TBKBP1A7MCY6 615 aa14.81□□□□□ -0.04
HMGCS2-201ENST00000369406 AP1G2O75843 785 aa14.81□□□□□ -0.04
HMGCS2-201ENST00000369406 CD48P09326 243 aa14.81□□□□□ -0.04
HMGCS2-201ENST00000369406 RALAP11233 206 aa14.81□□□□□ -0.04
HMGCS2-201ENST00000369406 KRT10P13645 584 aa14.81□□□□□ -0.04
HMGCS2-201ENST00000369406 MIPP30301 263 aa14.81□□□□□ -0.04
HMGCS2-201ENST00000369406 ZNF143P52747 638 aaPredicted RBP14.81□□□□□ -0.04
HMGCS2-201ENST00000369406 PITX1P78337 314 aaPredicted RBP14.81□□□□□ -0.04
HMGCS2-201ENST00000369406 CDO1Q16878 200 aa14.81□□□□□ -0.04
HMGCS2-201ENST00000369406 SEL1L2Q5TEA6 688 aa14.81□□□□□ -0.04
HMGCS2-201ENST00000369406 MFSD7Q6UXD7 560 aa14.81□□□□□ -0.04
HMGCS2-201ENST00000369406 HFE2Q6ZVN8 426 aa14.81□□□□□ -0.04
HMGCS2-201ENST00000369406 NPAS4Q8IUM7 802 aa14.81□□□□□ -0.04
HMGCS2-201ENST00000369406 PCDHB8Q9UN66 801 aa14.81□□□□□ -0.04
HMGCS2-201ENST00000369406 GREB1Q4ZG55 1949 aa14.81□□□□□ -0.04
HMGCS2-201ENST00000369406 COL4A4P53420 1690 aaPredicted RBP14.81□□□□□ -0.04
HMGCS2-201ENST00000369406 RANBP2P49792 3224 aaKnown RBP14.81□□□□□ -0.04
HMGCS2-201ENST00000369406 TMEM189-UBE2V1I3L0A0 370 aa14.81□□□□□ -0.04
HMGCS2-201ENST00000369406 PDGFRAP16234 1089 aa14.81□□□□□ -0.04
HMGCS2-201ENST00000369406 GPD1P21695 349 aa14.81□□□□□ -0.04
HMGCS2-201ENST00000369406 ATP11AP98196 1134 aa14.81□□□□□ -0.04
HMGCS2-201ENST00000369406 OTUD1Q5VV17 481 aaPredicted RBP14.81□□□□□ -0.04
HMGCS2-201ENST00000369406 WDR93Q6P2C0 686 aa14.81□□□□□ -0.04
HMGCS2-201ENST00000369406 STKLD1Q8NE28 680 aa14.81□□□□□ -0.04
HMGCS2-201ENST00000369406 ATG4AQ8WYN0 398 aa14.81□□□□□ -0.04
HMGCS2-201ENST00000369406 SLITRK1Q96PX8 696 aa14.81□□□□□ -0.04
HMGCS2-201ENST00000369406 ACBD6Q9BR61 282 aa14.81□□□□□ -0.04
HMGCS2-201ENST00000369406 MAGEB5Q9BZ81 275 aa14.81□□□□□ -0.04
HMGCS2-201ENST00000369406 TARSL2A2RTX5 802 aaKnown RBP14.8□□□□□ -0.04
HMGCS2-201ENST00000369406 FSCN2O14926 492 aa14.8□□□□□ -0.04
HMGCS2-201ENST00000369406 TTI1O43156 1089 aa14.8□□□□□ -0.04
HMGCS2-201ENST00000369406 KRT1P04264 644 aa14.8□□□□□ -0.04
HMGCS2-201ENST00000369406 BDNFP23560 247 aa14.8□□□□□ -0.04
HMGCS2-201ENST00000369406 KLF1Q13351 362 aaPredicted RBP14.8□□□□□ -0.04
HMGCS2-201ENST00000369406 TAS1R1Q7RTX1 841 aa14.8□□□□□ -0.04
HMGCS2-201ENST00000369406 ZBTB9Q96C00 473 aa14.8□□□□□ -0.04
HMGCS2-201ENST00000369406 TRIM51Q9BSJ1 452 aa14.8□□□□□ -0.04
HMGCS2-201ENST00000369406 C11orf84Q9BUA3 381 aaPredicted RBP14.8□□□□□ -0.04
HMGCS2-201ENST00000369406 LRFN2Q9ULH4 789 aa14.8□□□□□ -0.04
HMGCS2-201ENST00000369406 BHMG1C9JSJ3 638 aaPredicted RBP14.8□□□□□ -0.04
HMGCS2-201ENST00000369406 HEXIM1O94992 359 aaKnown RBP14.8□□□□□ -0.04
HMGCS2-201ENST00000369406 FAM200BP0CF97 657 aa14.8□□□□□ -0.04
HMGCS2-201ENST00000369406 CSF2RAP15509 400 aa14.8□□□□□ -0.04
HMGCS2-201ENST00000369406 TYMPP19971 482 aa14.8□□□□□ -0.04
HMGCS2-201ENST00000369406 DEFB103AP81534 67 aa14.8□□□□□ -0.04
HMGCS2-201ENST00000369406 BHLHA9Q7RTU4 235 aa14.8□□□□□ -0.04
HMGCS2-201ENST00000369406 CCDC50Q8IVM0 306 aa14.8□□□□□ -0.04
HMGCS2-201ENST00000369406 ABI1Q8IZP0 508 aa14.8□□□□□ -0.04
HMGCS2-201ENST00000369406 C1orf54Q8WWF1 131 aa14.8□□□□□ -0.04
HMGCS2-201ENST00000369406 CASKIN2Q8WXE0 1202 aa14.8□□□□□ -0.04
HMGCS2-201ENST00000369406 PRDM5Q9NQX1 630 aaPredicted RBP14.8□□□□□ -0.04
HMGCS2-201ENST00000369406 CHST7Q9NS84 486 aa14.8□□□□□ -0.04
HMGCS2-201ENST00000369406 STIM2Q9P246 746 aa14.8□□□□□ -0.04
HMGCS2-201ENST00000369406 KANSL3Q9P2N6 904 aa14.8□□□□□ -0.04
HMGCS2-201ENST00000369406 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.8□□□□□ -0.04
HMGCS2-201ENST00000369406 CHD9Q3L8U1 2897 aa14.79□□□□□ -0.04
HMGCS2-201ENST00000369406 ZRANB2O95218 330 aaKnown RBP eCLIP14.79□□□□□ -0.04
HMGCS2-201ENST00000369406 PCSK1P29120 753 aa14.79□□□□□ -0.04
HMGCS2-201ENST00000369406 KCNJ1P48048 391 aa14.79□□□□□ -0.04
HMGCS2-201ENST00000369406 RSPO2Q6UXX9 243 aaPredicted RBP14.79□□□□□ -0.04
HMGCS2-201ENST00000369406 SLC26A9Q7LBE3 791 aa14.79□□□□□ -0.04
HMGCS2-201ENST00000369406 DDX42Q86XP3 938 aaKnown RBP eCLIP14.79□□□□□ -0.04
HMGCS2-201ENST00000369406 EXD1Q8NHP7 514 aa14.79□□□□□ -0.04
HMGCS2-201ENST00000369406 HSFY1Q96LI6 401 aa14.79□□□□□ -0.04
HMGCS2-201ENST00000369406 GDAP1L1Q96MZ0 367 aa14.79□□□□□ -0.04
HMGCS2-201ENST00000369406 FAM193BQ96PV7 902 aaPredicted RBP14.79□□□□□ -0.04
HMGCS2-201ENST00000369406 CNPY3Q9BT09 278 aa14.79□□□□□ -0.04
HMGCS2-201ENST00000369406 VN1R3Q9BXE9 311 aa14.79□□□□□ -0.04
HMGCS2-201ENST00000369406 DPYSL4O14531 572 aa14.78□□□□□ -0.04
HMGCS2-201ENST00000369406 SASH3O75995 380 aa14.78□□□□□ -0.04
HMGCS2-201ENST00000369406 TRUB2O95900 331 aaKnown RBP14.78□□□□□ -0.04
HMGCS2-201ENST00000369406 FYNP06241 537 aa14.78□□□□□ -0.04
HMGCS2-201ENST00000369406 ACRP10323 421 aa14.78□□□□□ -0.04
HMGCS2-201ENST00000369406 PTGIRP43119 386 aa14.78□□□□□ -0.04
HMGCS2-201ENST00000369406 TKTL1P51854 596 aa14.78□□□□□ -0.04
HMGCS2-201ENST00000369406 HDAC4P56524 1084 aa14.78□□□□□ -0.04
HMGCS2-201ENST00000369406 GUCY2DQ02846 1103 aa14.78□□□□□ -0.04
HMGCS2-201ENST00000369406 YWHAHQ04917 246 aaPredicted RBP14.78□□□□□ -0.04
HMGCS2-201ENST00000369406 BEND6Q5SZJ8 279 aaPredicted RBP14.78□□□□□ -0.04
HMGCS2-201ENST00000369406 METTL23Q86XA0 190 aa14.78□□□□□ -0.04
HMGCS2-201ENST00000369406 ANKLE1Q8NAG6 615 aa14.78□□□□□ -0.04
HMGCS2-201ENST00000369406 ULBP1Q9BZM6 244 aa14.78□□□□□ -0.04
HMGCS2-201ENST00000369406 GPATCH2LQ9NWQ4 482 aa14.78□□□□□ -0.04
HMGCS2-201ENST00000369406 ADAM28Q9UKQ2 775 aa14.78□□□□□ -0.04
HMGCS2-201ENST00000369406 CCDC188H7C350 402 aa14.78□□□□□ -0.04
HMGCS2-201ENST00000369406 GALTP07902 379 aa14.78□□□□□ -0.04
HMGCS2-201ENST00000369406 CARSP49589 748 aaKnown RBP14.78□□□□□ -0.04
HMGCS2-201ENST00000369406 RAB41Q5JT25 222 aa14.78□□□□□ -0.04
HMGCS2-201ENST00000369406 VARS2Q5ST30 1063 aaKnown RBP14.78□□□□□ -0.04
HMGCS2-201ENST00000369406 LRRC38Q5VT99 294 aa14.78□□□□□ -0.04
HMGCS2-201ENST00000369406 FAM117BQ6P1L5 589 aa14.78□□□□□ -0.04
HMGCS2-201ENST00000369406 SPOCD1Q6ZMY3 1216 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms