RNA–Protein interactions for RNA: ENST00000369259.4

CHD1L-203, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 1 (best) BASIC

Gene CHD1L, Length 2,358 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-203ENST00000369259 WASHC5Q12768 1159 aa16.86■□□□□ 0.29
CHD1L-203ENST00000369259 ALCAMQ13740 583 aa16.86■□□□□ 0.29
CHD1L-203ENST00000369259 APOFQ13790 326 aa16.86■□□□□ 0.29
CHD1L-203ENST00000369259 Q6ZNX1 250 aa16.86■□□□□ 0.29
CHD1L-203ENST00000369259 ELMO3Q96BJ8 720 aa16.86■□□□□ 0.29
CHD1L-203ENST00000369259 NLRP4Q96MN2 994 aa16.86■□□□□ 0.29
CHD1L-203ENST00000369259 PHF12Q96QT6 1004 aa16.86■□□□□ 0.29
CHD1L-203ENST00000369259 EBF4Q9BQW3 602 aa16.86■□□□□ 0.29
CHD1L-203ENST00000369259 SIRPGQ9P1W8 387 aa16.86■□□□□ 0.29
CHD1L-203ENST00000369259 WRAP73Q9P2S5 460 aaPredicted RBP16.86■□□□□ 0.29
CHD1L-203ENST00000369259 PCDHGB4Q9UN71 923 aa16.86■□□□□ 0.29
CHD1L-203ENST00000369259 PCDHGB5Q9Y5G0 923 aa16.86■□□□□ 0.29
CHD1L-203ENST00000369259 ROBO1Q9Y6N7 1651 aa16.85■□□□□ 0.29
CHD1L-203ENST00000369259 ARHGEF35A5YM69 484 aa16.85■□□□□ 0.29
CHD1L-203ENST00000369259 GOLGA8IPA6NC78 632 aa16.85■□□□□ 0.29
CHD1L-203ENST00000369259 GOLGA8JA6NMD2 632 aa16.85■□□□□ 0.29
CHD1L-203ENST00000369259 H3BSA7 217 aa16.85■□□□□ 0.29
CHD1L-203ENST00000369259 BOLA2-SMG1P6H3BVE0 249 aa16.85■□□□□ 0.29
CHD1L-203ENST00000369259 RGL2O15211 777 aa16.85■□□□□ 0.29
CHD1L-203ENST00000369259 CYP3A4P08684 503 aa16.85■□□□□ 0.29
CHD1L-203ENST00000369259 PORP16435 677 aaPredicted RBP16.85■□□□□ 0.29
CHD1L-203ENST00000369259 YY1P25490 414 aa16.85■□□□□ 0.29
CHD1L-203ENST00000369259 MYBPC1Q00872 1141 aa16.85■□□□□ 0.29
CHD1L-203ENST00000369259 CNGA3Q16281 694 aa16.85■□□□□ 0.29
CHD1L-203ENST00000369259 USP41Q3LFD5 358 aa16.85■□□□□ 0.29
CHD1L-203ENST00000369259 SPOCD1Q6ZMY3 1216 aa16.85■□□□□ 0.29
CHD1L-203ENST00000369259 KBTBD6Q86V97 674 aa16.85■□□□□ 0.29
CHD1L-203ENST00000369259 ZNF677Q86XU0 584 aa16.85■□□□□ 0.29
CHD1L-203ENST00000369259 NUDCD3Q8IVD9 361 aa16.85■□□□□ 0.29
CHD1L-203ENST00000369259 PDIK1LQ8N165 341 aa16.85■□□□□ 0.29
CHD1L-203ENST00000369259 FBXL13Q8NEE6 735 aa16.85■□□□□ 0.29
CHD1L-203ENST00000369259 C11orf70Q9BRQ4 267 aa16.85■□□□□ 0.29
CHD1L-203ENST00000369259 TMEM8AQ9HCN3 771 aa16.85■□□□□ 0.29
CHD1L-203ENST00000369259 INIPQ9NRY2 104 aa16.85■□□□□ 0.29
CHD1L-203ENST00000369259 FAF1Q9UNN5 650 aaPredicted RBP16.85■□□□□ 0.29
CHD1L-203ENST00000369259 CEPT1Q9Y6K0 416 aa16.85■□□□□ 0.29
CHD1L-203ENST00000369259 IGLV3-22A0A075B6J6 115 aa16.85■□□□□ 0.29
CHD1L-203ENST00000369259 LOC102724428A0A0B4J2F2 783 aa16.85■□□□□ 0.29
CHD1L-203ENST00000369259 CCDC195A0A1B0GUA6 201 aa16.85■□□□□ 0.29
CHD1L-203ENST00000369259 TLR3O15455 904 aaKnown RBP16.85■□□□□ 0.29
CHD1L-203ENST00000369259 PSMD10O75832 226 aa16.85■□□□□ 0.29
CHD1L-203ENST00000369259 KLHL2O95198 593 aa16.85■□□□□ 0.29
CHD1L-203ENST00000369259 CRTAMO95727 393 aa16.85■□□□□ 0.29
CHD1L-203ENST00000369259 PROCP04070 461 aa16.85■□□□□ 0.29
CHD1L-203ENST00000369259 SRGAP2CP0DJJ0 459 aa16.85■□□□□ 0.29
CHD1L-203ENST00000369259 SRGAP2BP0DMP2 458 aa16.85■□□□□ 0.29
CHD1L-203ENST00000369259 CDH2P19022 906 aaPredicted RBP16.85■□□□□ 0.29
CHD1L-203ENST00000369259 MLH1P40692 756 aa16.85■□□□□ 0.29
CHD1L-203ENST00000369259 HDAC4P56524 1084 aa16.85■□□□□ 0.29
CHD1L-203ENST00000369259 SIK1P57059 783 aa16.85■□□□□ 0.29
CHD1L-203ENST00000369259 MTM1Q13496 603 aa16.85■□□□□ 0.29
CHD1L-203ENST00000369259 BTG3Q14201 252 aaPredicted RBP16.85■□□□□ 0.29
CHD1L-203ENST00000369259 KBTBD12Q3ZCT8 623 aa16.85■□□□□ 0.29
CHD1L-203ENST00000369259 CCDC33Q8N5R6 958 aa16.85■□□□□ 0.29
CHD1L-203ENST00000369259 POU5F2Q8N7G0 328 aa16.85■□□□□ 0.29
CHD1L-203ENST00000369259 TAS1R2Q8TE23 839 aa16.85■□□□□ 0.29
CHD1L-203ENST00000369259 CCDC127Q96BQ5 260 aa16.85■□□□□ 0.29
CHD1L-203ENST00000369259 PRPF18Q99633 342 aaKnown RBP16.85■□□□□ 0.29
CHD1L-203ENST00000369259 AMNQ9BXJ7 453 aa16.85■□□□□ 0.29
CHD1L-203ENST00000369259 OXCT2Q9BYC2 517 aaPredicted RBP16.85■□□□□ 0.29
CHD1L-203ENST00000369259 APPL1Q9UKG1 709 aa16.85■□□□□ 0.29
CHD1L-203ENST00000369259 ITGA11Q9UKX5 1188 aa16.85■□□□□ 0.29
CHD1L-203ENST00000369259 ZHX2Q9Y6X8 837 aa16.85■□□□□ 0.29
CHD1L-203ENST00000369259 SNNO75324 88 aaPredicted RBP16.84■□□□□ 0.29
CHD1L-203ENST00000369259 POLR2MP0CAP2 368 aa16.84■□□□□ 0.29
CHD1L-203ENST00000369259 FUT4P22083 530 aa16.84■□□□□ 0.29
CHD1L-203ENST00000369259 PRELPP51888 382 aa16.84■□□□□ 0.29
CHD1L-203ENST00000369259 MCCD1P59942 119 aaPredicted RBP16.84■□□□□ 0.29
CHD1L-203ENST00000369259 PICALMQ13492 652 aa16.84■□□□□ 0.29
CHD1L-203ENST00000369259 IYDQ6PHW0 289 aa16.84■□□□□ 0.29
CHD1L-203ENST00000369259 ERI1Q8IV48 349 aaKnown RBP16.84■□□□□ 0.29
CHD1L-203ENST00000369259 CNBD2Q96M20 576 aa16.84■□□□□ 0.29
CHD1L-203ENST00000369259 RMI1Q9H9A7 625 aa16.84■□□□□ 0.29
CHD1L-203ENST00000369259 TMOD2Q9NZR1 351 aa16.84■□□□□ 0.29
CHD1L-203ENST00000369259 C6orf203Q9P0P8 240 aaPredicted RBP16.84■□□□□ 0.29
CHD1L-203ENST00000369259 PCDHB2Q9Y5E7 798 aa16.84■□□□□ 0.29
CHD1L-203ENST00000369259 AP4B1Q9Y6B7 739 aa16.84■□□□□ 0.29
CHD1L-203ENST00000369259 ASTN2O75129 1339 aaPredicted RBP16.84■□□□□ 0.29
CHD1L-203ENST00000369259 SH3PXD2BA1X283 911 aa16.84■□□□□ 0.29
CHD1L-203ENST00000369259 MAPTP10636 758 aaKnown RBP16.84■□□□□ 0.29
CHD1L-203ENST00000369259 ECE1P42892 770 aa16.84■□□□□ 0.29
CHD1L-203ENST00000369259 PATL1Q86TB9 770 aaKnown RBP16.84■□□□□ 0.29
CHD1L-203ENST00000369259 HPS6Q86YV9 775 aa16.84■□□□□ 0.29
CHD1L-203ENST00000369259 CBWD2Q8IUF1 395 aa16.84■□□□□ 0.29
CHD1L-203ENST00000369259 PQLC1Q8N2U9 271 aa16.84■□□□□ 0.29
CHD1L-203ENST00000369259 RIN3Q8TB24 985 aa16.84■□□□□ 0.29
CHD1L-203ENST00000369259 SLC35B2Q8TB61 432 aa16.84■□□□□ 0.29
CHD1L-203ENST00000369259 RAB3IL1Q8TBN0 382 aa16.84■□□□□ 0.29
CHD1L-203ENST00000369259 hCG_1818297A0A087WSY0 165 aa16.83■□□□□ 0.28
CHD1L-203ENST00000369259 TCRBV9S1A1TA0A576 114 aa16.83■□□□□ 0.28
CHD1L-203ENST00000369259 KANSL1LA0AUZ9 987 aa16.83■□□□□ 0.28
CHD1L-203ENST00000369259 TRIM49D1C9J1S8 452 aa16.83■□□□□ 0.28
CHD1L-203ENST00000369259 DKC1O60832 514 aaKnown RBP eCLIP16.83■□□□□ 0.28
CHD1L-203ENST00000369259 FAM58BPP0C7Q3 252 aa16.83■□□□□ 0.28
CHD1L-203ENST00000369259 TCF4P15884 667 aa16.83■□□□□ 0.28
CHD1L-203ENST00000369259 OXCT1P55809 520 aa16.83■□□□□ 0.28
CHD1L-203ENST00000369259 TCHHL1Q5QJ38 904 aaPredicted RBP16.83■□□□□ 0.28
CHD1L-203ENST00000369259 TTC39BQ5VTQ0 682 aaPredicted RBP16.83■□□□□ 0.28
CHD1L-203ENST00000369259 PLEKHA7Q6IQ23 1121 aa16.83■□□□□ 0.28
CHD1L-203ENST00000369259 DENND5BQ6ZUT9 1274 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms