RNA–Protein interactions for RNA: ENST00000369089.3

PRDM1-201, Transcript of PR/SET domain 1, humanhuman

TSL 1 (best) BASIC

Gene PRDM1, Length 4,675 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM1-201ENST00000369089 IGSF9Q9P2J2 1179 aa10.8□□□□□ -0.68
PRDM1-201ENST00000369089 VPS51Q9UID3 782 aa10.8□□□□□ -0.68
PRDM1-201ENST00000369089 PCDHB13Q9Y5F0 798 aa10.8□□□□□ -0.68
PRDM1-201ENST00000369089 ACTL7BQ9Y614 415 aa10.8□□□□□ -0.68
PRDM1-201ENST00000369089 CLOCKO15516 846 aa10.8□□□□□ -0.68
PRDM1-201ENST00000369089 PRKCBP05771 671 aa10.8□□□□□ -0.68
PRDM1-201ENST00000369089 KCNQ4P56696 695 aa10.8□□□□□ -0.68
PRDM1-201ENST00000369089 MAPKAPK5Q8IW41 473 aa10.8□□□□□ -0.68
PRDM1-201ENST00000369089 HACE1Q8IYU2 909 aa10.8□□□□□ -0.68
PRDM1-201ENST00000369089 SNX31Q8N9S9 440 aa10.8□□□□□ -0.68
PRDM1-201ENST00000369089 PJA1Q8NG27 643 aa10.8□□□□□ -0.68
PRDM1-201ENST00000369089 ASB12Q8WXK4 309 aa10.8□□□□□ -0.68
PRDM1-201ENST00000369089 PSKH2Q96QS6 385 aa10.8□□□□□ -0.68
PRDM1-201ENST00000369089 SEC31BQ9NQW1 1179 aa10.8□□□□□ -0.68
PRDM1-201ENST00000369089 GDAP2Q9NXN4 497 aa10.8□□□□□ -0.68
PRDM1-201ENST00000369089 ERVV-1B6SEH8 477 aa10.79□□□□□ -0.68
PRDM1-201ENST00000369089 IFNAR1P17181 557 aa10.79□□□□□ -0.68
PRDM1-201ENST00000369089 NUDT2P50583 147 aa10.79□□□□□ -0.68
PRDM1-201ENST00000369089 SLC12A2P55011 1212 aa10.79□□□□□ -0.68
PRDM1-201ENST00000369089 MEA1Q16626 185 aa10.79□□□□□ -0.68
PRDM1-201ENST00000369089 PABPC1LQ4VXU2 614 aaKnown RBP10.79□□□□□ -0.68
PRDM1-201ENST00000369089 ARHGEF16Q5VV41 709 aa10.79□□□□□ -0.68
PRDM1-201ENST00000369089 ZNF544Q6NX49 715 aa10.79□□□□□ -0.68
PRDM1-201ENST00000369089 ZCCHC8Q6NZY4 707 aaKnown RBP10.79□□□□□ -0.68
PRDM1-201ENST00000369089 PCGF5Q86SE9 256 aa10.79□□□□□ -0.68
PRDM1-201ENST00000369089 SAMD14Q8IZD0 417 aaPredicted RBP10.79□□□□□ -0.68
PRDM1-201ENST00000369089 ZNF654Q8IZM8 581 aa10.79□□□□□ -0.68
PRDM1-201ENST00000369089 TAB3Q8N5C8 712 aaPredicted RBP10.79□□□□□ -0.68
PRDM1-201ENST00000369089 NACC2Q96BF6 587 aa10.79□□□□□ -0.68
PRDM1-201ENST00000369089 TMA16Q96EY4 203 aaKnown RBP10.79□□□□□ -0.68
PRDM1-201ENST00000369089 CNDP1Q96KN2 507 aa10.79□□□□□ -0.68
PRDM1-201ENST00000369089 BIRC8Q96P09 236 aa10.79□□□□□ -0.68
PRDM1-201ENST00000369089 BRIP1Q9BX63 1249 aa10.79□□□□□ -0.68
PRDM1-201ENST00000369089 COPS7BQ9H9Q2 264 aaPredicted RBP10.79□□□□□ -0.68
PRDM1-201ENST00000369089 CCNT1O60563 726 aaKnown RBP10.79□□□□□ -0.68
PRDM1-201ENST00000369089 PTENP60484 403 aa10.79□□□□□ -0.68
PRDM1-201ENST00000369089 RUNX1T1Q06455 604 aa10.79□□□□□ -0.68
PRDM1-201ENST00000369089 STK11Q15831 433 aa10.79□□□□□ -0.68
PRDM1-201ENST00000369089 GARNL3Q5VVW2 1013 aa10.79□□□□□ -0.68
PRDM1-201ENST00000369089 RFWD3Q6PCD5 774 aa10.79□□□□□ -0.68
PRDM1-201ENST00000369089 UBASH3BQ8TF42 649 aa10.79□□□□□ -0.68
PRDM1-201ENST00000369089 TGFBRAP1Q8WUH2 860 aa10.79□□□□□ -0.68
PRDM1-201ENST00000369089 DLG3Q92796 817 aa10.79□□□□□ -0.68
PRDM1-201ENST00000369089 SPOCK3Q9BQ16 436 aa10.79□□□□□ -0.68
PRDM1-201ENST00000369089 MTG1Q9BT17 334 aaPredicted RBP10.79□□□□□ -0.68
PRDM1-201ENST00000369089 PACSIN1Q9BY11 444 aa10.79□□□□□ -0.68
PRDM1-201ENST00000369089 KLC2Q9H0B6 622 aa10.79□□□□□ -0.68
PRDM1-201ENST00000369089 TMEM5Q9Y2B1 443 aa10.79□□□□□ -0.68
PRDM1-201ENST00000369089 PCDHGA10Q9Y5H3 936 aa10.79□□□□□ -0.68
PRDM1-201ENST00000369089 hCG_1642624A0A1W2PR95 340 aa10.79□□□□□ -0.68
PRDM1-201ENST00000369089 DCAF8L1A6NGE4 600 aa10.79□□□□□ -0.68
PRDM1-201ENST00000369089 TCN1P20061 433 aaPredicted RBP10.79□□□□□ -0.68
PRDM1-201ENST00000369089 EIF6P56537 245 aaKnown RBP10.79□□□□□ -0.68
PRDM1-201ENST00000369089 SPRED3Q2MJR0 410 aa10.79□□□□□ -0.68
PRDM1-201ENST00000369089 SNAP47Q5SQN1 464 aa10.79□□□□□ -0.68
PRDM1-201ENST00000369089 PROX1Q92786 737 aa10.79□□□□□ -0.68
PRDM1-201ENST00000369089 FERD3LQ96RJ6 166 aa10.79□□□□□ -0.68
PRDM1-201ENST00000369089 COMMD8Q9NX08 183 aa10.79□□□□□ -0.68
PRDM1-201ENST00000369089 NRXN1Q9ULB1 1477 aa10.79□□□□□ -0.68
PRDM1-201ENST00000369089 PIK3C2BO00750 1634 aa10.79□□□□□ -0.68
PRDM1-201ENST00000369089 PDE9AO76083 593 aa10.79□□□□□ -0.68
PRDM1-201ENST00000369089 ATP2B4P23634 1241 aa10.79□□□□□ -0.68
PRDM1-201ENST00000369089 RXRGP48443 463 aa10.79□□□□□ -0.68
PRDM1-201ENST00000369089 AQP4P55087 323 aa10.79□□□□□ -0.68
PRDM1-201ENST00000369089 MAP3K10Q02779 954 aa10.79□□□□□ -0.68
PRDM1-201ENST00000369089 FAM182BQ5T319 152 aa10.79□□□□□ -0.68
PRDM1-201ENST00000369089 TTC7BQ86TV6 843 aa10.79□□□□□ -0.68
PRDM1-201ENST00000369089 SYTL1Q8IYJ3 562 aa10.79□□□□□ -0.68
PRDM1-201ENST00000369089 ADCY4Q8NFM4 1077 aa10.79□□□□□ -0.68
PRDM1-201ENST00000369089 SLC22A8Q8TCC7 542 aa10.79□□□□□ -0.68
PRDM1-201ENST00000369089 C1orf54Q8WWF1 131 aa10.79□□□□□ -0.68
PRDM1-201ENST00000369089 SYN2Q92777 582 aaPredicted RBP10.79□□□□□ -0.68
PRDM1-201ENST00000369089 SCYL1Q96KG9 808 aa10.79□□□□□ -0.68
PRDM1-201ENST00000369089 RTFDC1Q9BY42 306 aaPredicted RBP10.79□□□□□ -0.68
PRDM1-201ENST00000369089 SH3D21A4FU49 640 aa10.78□□□□□ -0.68
PRDM1-201ENST00000369089 UNCXA6NJT0 531 aa10.78□□□□□ -0.68
PRDM1-201ENST00000369089 TM9SF1O15321 606 aa10.78□□□□□ -0.68
PRDM1-201ENST00000369089 DLATP10515 647 aaKnown RBP10.78□□□□□ -0.68
PRDM1-201ENST00000369089 CCND2P30279 289 aa10.78□□□□□ -0.68
PRDM1-201ENST00000369089 ATN1P54259 1190 aaPredicted RBP10.78□□□□□ -0.68
PRDM1-201ENST00000369089 AQP5P55064 265 aa10.78□□□□□ -0.68
PRDM1-201ENST00000369089 DSTNP60981 165 aa10.78□□□□□ -0.68
PRDM1-201ENST00000369089 PRPSAP1Q14558 356 aa10.78□□□□□ -0.68
PRDM1-201ENST00000369089 CCDC85BQ15834 202 aaPredicted RBP10.78□□□□□ -0.68
PRDM1-201ENST00000369089 ALFQ53S48 1182 aa10.78□□□□□ -0.68
PRDM1-201ENST00000369089 FAM47AQ5JRC9 791 aa10.78□□□□□ -0.68
PRDM1-201ENST00000369089 PQLC1Q8N2U9 271 aa10.78□□□□□ -0.68
PRDM1-201ENST00000369089 FBXW8Q8N3Y1 598 aa10.78□□□□□ -0.68
PRDM1-201ENST00000369089 FANCBQ8NB91 859 aa10.78□□□□□ -0.68
PRDM1-201ENST00000369089 OR7A2PQ8NGA2 310 aa10.78□□□□□ -0.68
PRDM1-201ENST00000369089 ADAM33Q9BZ11 813 aa10.78□□□□□ -0.68
PRDM1-201ENST00000369089 SLC13A1Q9BZW2 595 aa10.78□□□□□ -0.68
PRDM1-201ENST00000369089 IL25Q9H293 177 aa10.78□□□□□ -0.68
PRDM1-201ENST00000369089 CXorf21Q9HAI6 301 aa10.78□□□□□ -0.68
PRDM1-201ENST00000369089 DNAJC11Q9NVH1 559 aa10.78□□□□□ -0.68
PRDM1-201ENST00000369089 ARL8BQ9NVJ2 186 aa10.78□□□□□ -0.68
PRDM1-201ENST00000369089 IFT52Q9Y366 437 aa10.78□□□□□ -0.68
PRDM1-201ENST00000369089 STON1Q9Y6Q2 735 aa10.78□□□□□ -0.68
PRDM1-201ENST00000369089 CLRN2A0PK11 232 aa10.78□□□□□ -0.68
PRDM1-201ENST00000369089 LRRC10BA6NIK2 292 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms