RNA–Protein interactions for RNA: ENST00000368838.1

SNX27-201, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best) BASIC

Gene SNX27, Length 1,308 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-201ENST00000368838 KIAA1328Q86T90 577 aa9.32□□□□□ -0.92
SNX27-201ENST00000368838 RHOT2Q8IXI1 618 aa9.32□□□□□ -0.92
SNX27-201ENST00000368838 SIX5Q8N196 739 aa9.32□□□□□ -0.92
SNX27-201ENST00000368838 PATJQ8NI35 1801 aa9.32□□□□□ -0.92
SNX27-201ENST00000368838 LNX1Q8TBB1 728 aaPredicted RBP9.32□□□□□ -0.92
SNX27-201ENST00000368838 RIN2Q8WYP3 895 aaPredicted RBP9.32□□□□□ -0.92
SNX27-201ENST00000368838 SMG7Q92540 1137 aaKnown RBP9.32□□□□□ -0.92
SNX27-201ENST00000368838 SECISBP2LQ93073 1101 aaKnown RBP9.32□□□□□ -0.92
SNX27-201ENST00000368838 TRIM11Q96F44 468 aa9.32□□□□□ -0.92
SNX27-201ENST00000368838 MYADMQ96S97 322 aa9.32□□□□□ -0.92
SNX27-201ENST00000368838 PRRX2Q99811 253 aa9.32□□□□□ -0.92
SNX27-201ENST00000368838 COLEC11Q9BWP8 271 aa9.32□□□□□ -0.92
SNX27-201ENST00000368838 LHX5Q9H2C1 402 aa9.32□□□□□ -0.92
SNX27-201ENST00000368838 KCNK12Q9HB15 430 aa9.32□□□□□ -0.92
SNX27-201ENST00000368838 PIDD1Q9HB75 910 aa9.32□□□□□ -0.92
SNX27-201ENST00000368838 AVENQ9NQS1 362 aaPredicted RBP9.32□□□□□ -0.92
SNX27-201ENST00000368838 DPP3Q9NY33 737 aa9.32□□□□□ -0.92
SNX27-201ENST00000368838 RNF14Q9UBS8 474 aa9.32□□□□□ -0.92
SNX27-201ENST00000368838 FBXL21Q9UKT6 434 aa9.32□□□□□ -0.92
SNX27-201ENST00000368838 USTQ9Y2C2 406 aa9.32□□□□□ -0.92
SNX27-201ENST00000368838 JRKLQ9Y4A0 524 aa9.32□□□□□ -0.92
SNX27-201ENST00000368838 TICRRQ7Z2Z1 1910 aa9.32□□□□□ -0.92
SNX27-201ENST00000368838 SMIM28A0A1B0GU29 152 aa9.31□□□□□ -0.92
SNX27-201ENST00000368838 TGM5O43548 720 aa9.31□□□□□ -0.92
SNX27-201ENST00000368838 CILPO75339 1184 aa9.31□□□□□ -0.92
SNX27-201ENST00000368838 RECQL4O94761 1208 aa9.31□□□□□ -0.92
SNX27-201ENST00000368838 EFEMP2O95967 443 aa9.31□□□□□ -0.92
SNX27-201ENST00000368838 NFICP08651 508 aa9.31□□□□□ -0.92
SNX27-201ENST00000368838 CHRNB2P17787 502 aa9.31□□□□□ -0.92
SNX27-201ENST00000368838 RPL9P32969 192 aaKnown RBP9.31□□□□□ -0.92
SNX27-201ENST00000368838 MYL6P60660 151 aa9.31□□□□□ -0.92
SNX27-201ENST00000368838 FMO1Q01740 532 aa9.31□□□□□ -0.92
SNX27-201ENST00000368838 CYP27A1Q02318 531 aa9.31□□□□□ -0.92
SNX27-201ENST00000368838 DSG1Q02413 1049 aa9.31□□□□□ -0.92
SNX27-201ENST00000368838 CENPCQ03188 943 aa9.31□□□□□ -0.92
SNX27-201ENST00000368838 MYO1EQ12965 1108 aa9.31□□□□□ -0.92
SNX27-201ENST00000368838 TDGQ13569 410 aa9.31□□□□□ -0.92
SNX27-201ENST00000368838 NR6A1Q15406 480 aa9.31□□□□□ -0.92
SNX27-201ENST00000368838 ARHGAP44Q17R89 818 aa9.31□□□□□ -0.92
SNX27-201ENST00000368838 ZNF699Q32M78 642 aa9.31□□□□□ -0.92
SNX27-201ENST00000368838 RTP2Q5QGT7 225 aa9.31□□□□□ -0.92
SNX27-201ENST00000368838 GET4Q7L5D6 327 aaPredicted RBP9.31□□□□□ -0.92
SNX27-201ENST00000368838 OTOP3Q7RTS5 596 aa9.31□□□□□ -0.92
SNX27-201ENST00000368838 CEP57Q86XR8 500 aa9.31□□□□□ -0.92
SNX27-201ENST00000368838 PHF13Q86YI8 300 aaPredicted RBP9.31□□□□□ -0.92
SNX27-201ENST00000368838 RNF168Q8IYW5 571 aaPredicted RBP9.31□□□□□ -0.92
SNX27-201ENST00000368838 RFFLQ8WZ73 363 aa9.31□□□□□ -0.92
SNX27-201ENST00000368838 KAT5Q92993 513 aa9.31□□□□□ -0.92
SNX27-201ENST00000368838 ZNF707Q96C28 371 aaPredicted RBP9.31□□□□□ -0.92
SNX27-201ENST00000368838 NOX5Q96PH1 765 aa9.31□□□□□ -0.92
SNX27-201ENST00000368838 PPP1R10Q96QC0 940 aaKnown RBP9.31□□□□□ -0.92
SNX27-201ENST00000368838 DNAI2Q9GZS0 605 aa9.31□□□□□ -0.92
SNX27-201ENST00000368838 SNTG2Q9NY99 539 aa9.31□□□□□ -0.92
SNX27-201ENST00000368838 DNAI1Q9UI46 699 aa9.31□□□□□ -0.92
SNX27-201ENST00000368838 GTF3C4Q9UKN8 822 aa9.31□□□□□ -0.92
SNX27-201ENST00000368838 CA14Q9ULX7 337 aa9.31□□□□□ -0.92
SNX27-201ENST00000368838 ZNF638Q14966 1978 aaKnown RBP9.31□□□□□ -0.92
SNX27-201ENST00000368838 CLUHO75153 1309 aa9.31□□□□□ -0.92
SNX27-201ENST00000368838 CTAGE9A4FU28 777 aa9.31□□□□□ -0.92
SNX27-201ENST00000368838 I3L4J1 428 aa9.31□□□□□ -0.92
SNX27-201ENST00000368838 FANCGO15287 622 aa9.31□□□□□ -0.92
SNX27-201ENST00000368838 CYP26A1O43174 497 aa9.31□□□□□ -0.92
SNX27-201ENST00000368838 TADA2AO75478 443 aa9.31□□□□□ -0.92
SNX27-201ENST00000368838 KIF4AO95239 1232 aa9.31□□□□□ -0.92
SNX27-201ENST00000368838 HARSP12081 509 aaKnown RBP9.31□□□□□ -0.92
SNX27-201ENST00000368838 NPR3P17342 541 aa9.31□□□□□ -0.92
SNX27-201ENST00000368838 AARSP49588 968 aaKnown RBP eCLIP9.31□□□□□ -0.92
SNX27-201ENST00000368838 GALCP54803 685 aa9.31□□□□□ -0.92
SNX27-201ENST00000368838 NTHL1P78549 312 aa9.31□□□□□ -0.92
SNX27-201ENST00000368838 AMPD2Q01433 879 aa9.31□□□□□ -0.92
SNX27-201ENST00000368838 GRIK3Q13003 919 aa9.31□□□□□ -0.92
SNX27-201ENST00000368838 SEZ6Q53EL9 994 aa9.31□□□□□ -0.92
SNX27-201ENST00000368838 GLRA4Q5JXX5 417 aa9.31□□□□□ -0.92
SNX27-201ENST00000368838 DNTTIP2Q5QJE6 756 aaKnown RBP9.31□□□□□ -0.92
SNX27-201ENST00000368838 FAM171A1Q5VUB5 890 aa9.31□□□□□ -0.92
SNX27-201ENST00000368838 ACAD10Q6JQN1 1059 aa9.31□□□□□ -0.92
SNX27-201ENST00000368838 SYT10Q6XYQ8 523 aa9.31□□□□□ -0.92
SNX27-201ENST00000368838 ASCL5Q7RTU5 278 aa9.31□□□□□ -0.92
SNX27-201ENST00000368838 NOP9Q86U38 636 aaKnown RBP9.31□□□□□ -0.92
SNX27-201ENST00000368838 SYCE1Q8N0S2 351 aa9.31□□□□□ -0.92
SNX27-201ENST00000368838 CRYBG2Q8N1P7 616 aa9.31□□□□□ -0.92
SNX27-201ENST00000368838 HPDLQ96IR7 371 aa9.31□□□□□ -0.92
SNX27-201ENST00000368838 ZNF560Q96MR9 790 aa9.31□□□□□ -0.92
SNX27-201ENST00000368838 UROC1Q96N76 676 aa9.31□□□□□ -0.92
SNX27-201ENST00000368838 ZMAT2Q96NC0 199 aaKnown RBP9.31□□□□□ -0.92
SNX27-201ENST00000368838 ALS2CR12Q96Q35 445 aa9.31□□□□□ -0.92
SNX27-201ENST00000368838 RXFP1Q9HBX9 757 aa9.31□□□□□ -0.92
SNX27-201ENST00000368838 WDR6Q9NNW5 1121 aaKnown RBP9.31□□□□□ -0.92
SNX27-201ENST00000368838 ABCB6Q9NP58 842 aa9.31□□□□□ -0.92
SNX27-201ENST00000368838 LZTFL1Q9NQ48 299 aa9.31□□□□□ -0.92
SNX27-201ENST00000368838 CISHQ9NSE2 258 aa9.31□□□□□ -0.92
SNX27-201ENST00000368838 UVRAGQ9P2Y5 699 aa9.31□□□□□ -0.92
SNX27-201ENST00000368838 ADAM28Q9UKQ2 775 aa9.31□□□□□ -0.92
SNX27-201ENST00000368838 R3HCC1Q9Y3T6 440 aaKnown RBP9.31□□□□□ -0.92
SNX27-201ENST00000368838 PTGESO14684 152 aa9.3□□□□□ -0.92
SNX27-201ENST00000368838 ADAM12O43184 909 aa9.3□□□□□ -0.92
SNX27-201ENST00000368838 CTIFO43310 598 aaKnown RBP9.3□□□□□ -0.92
SNX27-201ENST00000368838 ITGB3P05106 788 aa9.3□□□□□ -0.92
SNX27-201ENST00000368838 CYP1A2P05177 515 aa9.3□□□□□ -0.92
SNX27-201ENST00000368838 SETSIPP0DME0 302 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms