RNA–Protein interactions for RNA: ENST00000368662.9

TUBE1-202, Transcript of tubulin epsilon 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBE1, Length 2,142 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-202ENST00000368662 GRXCR1A8MXD5 290 aa12.95□□□□□ -0.34
TUBE1-202ENST00000368662 F8VP50 259 aa12.95□□□□□ -0.34
TUBE1-202ENST00000368662 GOLGA8SH3BPF8 625 aa12.95□□□□□ -0.34
TUBE1-202ENST00000368662 PAPSS1O43252 624 aaPredicted RBP12.95□□□□□ -0.34
TUBE1-202ENST00000368662 LILRB3O75022 631 aa12.95□□□□□ -0.34
TUBE1-202ENST00000368662 ABLIM3O94929 683 aa12.95□□□□□ -0.34
TUBE1-202ENST00000368662 TUFMP49411 452 aaKnown RBP12.95□□□□□ -0.34
TUBE1-202ENST00000368662 TKTL1P51854 596 aa12.95□□□□□ -0.34
TUBE1-202ENST00000368662 CACNA2D1P54289 1103 aa12.95□□□□□ -0.34
TUBE1-202ENST00000368662 ADIGQ0VDE8 80 aa12.95□□□□□ -0.34
TUBE1-202ENST00000368662 RAB33AQ14088 237 aa12.95□□□□□ -0.34
TUBE1-202ENST00000368662 EFHC1Q5JVL4 640 aa12.95□□□□□ -0.34
TUBE1-202ENST00000368662 FAM109BQ6ICB4 259 aaPredicted RBP12.95□□□□□ -0.34
TUBE1-202ENST00000368662 OLFML1Q6UWY5 402 aa12.95□□□□□ -0.34
TUBE1-202ENST00000368662 RNF19BQ6ZMZ0 732 aa12.95□□□□□ -0.34
TUBE1-202ENST00000368662 PHLDB2Q86SQ0 1253 aa12.95□□□□□ -0.34
TUBE1-202ENST00000368662 SCUBE3Q8IX30 993 aa12.95□□□□□ -0.34
TUBE1-202ENST00000368662 SCML4Q8N228 414 aa12.95□□□□□ -0.34
TUBE1-202ENST00000368662 LRRC57Q8N9N7 239 aa12.95□□□□□ -0.34
TUBE1-202ENST00000368662 FNIP1Q8TF40 1166 aa12.95□□□□□ -0.34
TUBE1-202ENST00000368662 PGLYRP2Q96PD5 576 aa12.95□□□□□ -0.34
TUBE1-202ENST00000368662 MCEEQ96PE7 176 aa12.95□□□□□ -0.34
TUBE1-202ENST00000368662 WDR24Q96S15 920 aa12.95□□□□□ -0.34
TUBE1-202ENST00000368662 C17orf80Q9BSJ5 609 aa12.95□□□□□ -0.34
TUBE1-202ENST00000368662 RHOBTB2Q9BYZ6 727 aa12.95□□□□□ -0.34
TUBE1-202ENST00000368662 IP6K2Q9UHH9 426 aa12.95□□□□□ -0.34
TUBE1-202ENST00000368662 MSRAQ9UJ68 235 aa12.95□□□□□ -0.34
TUBE1-202ENST00000368662 PTPRDP23468 1912 aa12.95□□□□□ -0.34
TUBE1-202ENST00000368662 NLRC5Q86WI3 1866 aa12.95□□□□□ -0.34
TUBE1-202ENST00000368662 TMEM191CA6NGB0 347 aa12.94□□□□□ -0.34
TUBE1-202ENST00000368662 HHLA1C9JL84 531 aa12.94□□□□□ -0.34
TUBE1-202ENST00000368662 BUB1BO60566 1050 aaPredicted RBP12.94□□□□□ -0.34
TUBE1-202ENST00000368662 GLI1P08151 1106 aa12.94□□□□□ -0.34
TUBE1-202ENST00000368662 MYOGP15173 224 aa12.94□□□□□ -0.34
TUBE1-202ENST00000368662 ATF2P15336 505 aa12.94□□□□□ -0.34
TUBE1-202ENST00000368662 DESP17661 470 aa12.94□□□□□ -0.34
TUBE1-202ENST00000368662 RPL17P18621 184 aaKnown RBP12.94□□□□□ -0.34
TUBE1-202ENST00000368662 DNAJB2P25686 324 aa12.94□□□□□ -0.34
TUBE1-202ENST00000368662 SLC1A1P43005 524 aa12.94□□□□□ -0.34
TUBE1-202ENST00000368662 ERVK-21P61565 698 aa12.94□□□□□ -0.34
TUBE1-202ENST00000368662 RPL10AP62906 217 aaKnown RBP12.94□□□□□ -0.34
TUBE1-202ENST00000368662 SLC26A9Q7LBE3 791 aa12.94□□□□□ -0.34
TUBE1-202ENST00000368662 SLFN11Q7Z7L1 901 aa12.94□□□□□ -0.34
TUBE1-202ENST00000368662 SCN4BQ8IWT1 228 aa12.94□□□□□ -0.34
TUBE1-202ENST00000368662 ATAD1Q8NBU5 361 aa12.94□□□□□ -0.34
TUBE1-202ENST00000368662 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.94□□□□□ -0.34
TUBE1-202ENST00000368662 NAPGQ99747 312 aaPredicted RBP12.94□□□□□ -0.34
TUBE1-202ENST00000368662 TCF25Q9BQ70 676 aa12.94□□□□□ -0.34
TUBE1-202ENST00000368662 EMILIN2Q9BXX0 1053 aa12.94□□□□□ -0.34
TUBE1-202ENST00000368662 NGRNQ9NPE2 291 aaKnown RBP12.94□□□□□ -0.34
TUBE1-202ENST00000368662 ENTPD7Q9NQZ7 604 aa12.94□□□□□ -0.34
TUBE1-202ENST00000368662 TLR9Q9NR96 1032 aa12.94□□□□□ -0.34
TUBE1-202ENST00000368662 METTL5Q9NRN9 209 aaKnown RBP12.94□□□□□ -0.34
TUBE1-202ENST00000368662 TMEM30AQ9NV96 361 aa12.94□□□□□ -0.34
TUBE1-202ENST00000368662 ASNSD1Q9NWL6 643 aa12.94□□□□□ -0.34
TUBE1-202ENST00000368662 PIK3R2O00459 728 aa12.94□□□□□ -0.34
TUBE1-202ENST00000368662 LPXNO60711 386 aa12.94□□□□□ -0.34
TUBE1-202ENST00000368662 HAPLN1P10915 354 aaPredicted RBP12.94□□□□□ -0.34
TUBE1-202ENST00000368662 RGS19P49795 217 aa12.94□□□□□ -0.34
TUBE1-202ENST00000368662 MRPS5P82675 430 aaKnown RBP12.94□□□□□ -0.34
TUBE1-202ENST00000368662 ADCY1Q08828 1119 aa12.94□□□□□ -0.34
TUBE1-202ENST00000368662 PIGHQ14442 188 aaPredicted RBP12.94□□□□□ -0.34
TUBE1-202ENST00000368662 SMC1AQ14683 1233 aaKnown RBP12.94□□□□□ -0.34
TUBE1-202ENST00000368662 MGAT5BQ3V5L5 792 aa12.94□□□□□ -0.34
TUBE1-202ENST00000368662 LLGL2Q6P1M3 1020 aa12.94□□□□□ -0.34
TUBE1-202ENST00000368662 SPPL3Q8TCT6 385 aa12.94□□□□□ -0.34
TUBE1-202ENST00000368662 POF1BQ8WVV4 589 aa12.94□□□□□ -0.34
TUBE1-202ENST00000368662 IRGQQ8WZA9 623 aa12.94□□□□□ -0.34
TUBE1-202ENST00000368662 ZNF592Q92610 1267 aa12.94□□□□□ -0.34
TUBE1-202ENST00000368662 SPATA17Q96L03 361 aa12.94□□□□□ -0.34
TUBE1-202ENST00000368662 TRIM62Q9BVG3 475 aa12.94□□□□□ -0.34
TUBE1-202ENST00000368662 ALG13Q9NP73 1137 aaKnown RBP12.94□□□□□ -0.34
TUBE1-202ENST00000368662 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.93□□□□□ -0.34
TUBE1-202ENST00000368662 ADAM12O43184 909 aa12.93□□□□□ -0.34
TUBE1-202ENST00000368662 HSF2BPO75031 334 aa12.93□□□□□ -0.34
TUBE1-202ENST00000368662 GABBR2O75899 941 aa12.93□□□□□ -0.34
TUBE1-202ENST00000368662 PROSCO94903 275 aa12.93□□□□□ -0.34
TUBE1-202ENST00000368662 CXCL14O95715 111 aa12.93□□□□□ -0.34
TUBE1-202ENST00000368662 ZBED1O96006 694 aa12.93□□□□□ -0.34
TUBE1-202ENST00000368662 ADH1AP07327 375 aa12.93□□□□□ -0.34
TUBE1-202ENST00000368662 MAN1A1P33908 653 aa12.93□□□□□ -0.34
TUBE1-202ENST00000368662 CA8P35219 290 aa12.93□□□□□ -0.34
TUBE1-202ENST00000368662 RFC1P35251 1148 aaPredicted RBP12.93□□□□□ -0.34
TUBE1-202ENST00000368662 CDR1P51861 262 aa12.93□□□□□ -0.34
TUBE1-202ENST00000368662 SLC5A3P53794 718 aa12.93□□□□□ -0.34
TUBE1-202ENST00000368662 RPL7AP62424 266 aaKnown RBP12.93□□□□□ -0.34
TUBE1-202ENST00000368662 DUSP4Q13115 394 aa12.93□□□□□ -0.34
TUBE1-202ENST00000368662 MESDQ14696 234 aa12.93□□□□□ -0.34
TUBE1-202ENST00000368662 ACAP1Q15027 740 aa12.93□□□□□ -0.34
TUBE1-202ENST00000368662 PDE12Q6L8Q7 609 aaKnown RBP12.93□□□□□ -0.34
TUBE1-202ENST00000368662 PEX26Q7Z412 305 aa12.93□□□□□ -0.34
TUBE1-202ENST00000368662 TDHQ8IZJ6 230 aa12.93□□□□□ -0.34
TUBE1-202ENST00000368662 NUP93Q8N1F7 819 aa12.93□□□□□ -0.34
TUBE1-202ENST00000368662 SEPT5Q99719 369 aaPredicted RBP12.93□□□□□ -0.34
TUBE1-202ENST00000368662 PBX4Q9BYU1 374 aa12.93□□□□□ -0.34
TUBE1-202ENST00000368662 FBXO44Q9H4M3 255 aa12.93□□□□□ -0.34
TUBE1-202ENST00000368662 COMMD8Q9NX08 183 aa12.93□□□□□ -0.34
TUBE1-202ENST00000368662 TMEM59LQ9UK28 342 aa12.93□□□□□ -0.34
TUBE1-202ENST00000368662 AMFRQ9UKV5 643 aa12.93□□□□□ -0.34
TUBE1-202ENST00000368662 USP3Q9Y6I4 520 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms