RNA–Protein interactions for RNA: ENST00000368440.4

SMPDL3A-201, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPDL3A, Length 1,851 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-201ENST00000368440 DCXO43602 365 aa15.94■□□□□ 0.14
SMPDL3A-201ENST00000368440 NARSO43776 548 aaKnown RBP15.94■□□□□ 0.14
SMPDL3A-201ENST00000368440 PLCB2Q00722 1185 aa15.94■□□□□ 0.14
SMPDL3A-201ENST00000368440 TAF10Q12962 218 aa15.94■□□□□ 0.14
SMPDL3A-201ENST00000368440 ARHGAP15Q53QZ3 475 aa15.94■□□□□ 0.14
SMPDL3A-201ENST00000368440 SLC44A3Q8N4M1 653 aa15.94■□□□□ 0.14
SMPDL3A-201ENST00000368440 MAB21L3Q8N8X9 362 aa15.94■□□□□ 0.14
SMPDL3A-201ENST00000368440 UBA3Q8TBC4 463 aa15.94■□□□□ 0.14
SMPDL3A-201ENST00000368440 SMARCD2Q92925 531 aa15.94■□□□□ 0.14
SMPDL3A-201ENST00000368440 RSPRY1Q96DX4 576 aa15.94■□□□□ 0.14
SMPDL3A-201ENST00000368440 GPR88Q9GZN0 384 aa15.94■□□□□ 0.14
SMPDL3A-201ENST00000368440 SMG9Q9H0W8 520 aaKnown RBP15.94■□□□□ 0.14
SMPDL3A-201ENST00000368440 GANQ9H2C0 597 aa15.94■□□□□ 0.14
SMPDL3A-201ENST00000368440 TASP1Q9H6P5 420 aa15.94■□□□□ 0.14
SMPDL3A-201ENST00000368440 IL37Q9NZH6 218 aa15.94■□□□□ 0.14
SMPDL3A-201ENST00000368440 C2orf78A6NCI8 922 aa15.93■□□□□ 0.14
SMPDL3A-201ENST00000368440 PRAMEF12O95522 483 aa15.93■□□□□ 0.14
SMPDL3A-201ENST00000368440 YWHAQP27348 245 aa15.93■□□□□ 0.14
SMPDL3A-201ENST00000368440 USP8P40818 1118 aa15.93■□□□□ 0.14
SMPDL3A-201ENST00000368440 VIPR2P41587 438 aa15.93■□□□□ 0.14
SMPDL3A-201ENST00000368440 UBXN1Q04323 297 aa15.93■□□□□ 0.14
SMPDL3A-201ENST00000368440 SYCP1Q15431 976 aa15.93■□□□□ 0.14
SMPDL3A-201ENST00000368440 FKBP15Q5T1M5 1219 aa15.93■□□□□ 0.14
SMPDL3A-201ENST00000368440 MTSS1LQ765P7 747 aa15.93■□□□□ 0.14
SMPDL3A-201ENST00000368440 ANKRD52Q8NB46 1076 aa15.93■□□□□ 0.14
SMPDL3A-201ENST00000368440 MRPS31Q92665 395 aaKnown RBP15.93■□□□□ 0.14
SMPDL3A-201ENST00000368440 FAM81BQ96LP2 452 aa15.93■□□□□ 0.14
SMPDL3A-201ENST00000368440 SLC22A12Q96S37 553 aa15.93■□□□□ 0.14
SMPDL3A-201ENST00000368440 NAA15Q9BXJ9 866 aaKnown RBP15.93■□□□□ 0.14
SMPDL3A-201ENST00000368440 KIAA1257Q9ULG3 409 aa15.93■□□□□ 0.14
SMPDL3A-201ENST00000368440 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.93■□□□□ 0.14
SMPDL3A-201ENST00000368440 PI4K2BG5E9Z4 385 aa15.93■□□□□ 0.14
SMPDL3A-201ENST00000368440 TEX33O43247 280 aa15.93■□□□□ 0.14
SMPDL3A-201ENST00000368440 RTN3O95197 1032 aaPredicted RBP15.93■□□□□ 0.14
SMPDL3A-201ENST00000368440 UCHL3P15374 230 aa15.93■□□□□ 0.14
SMPDL3A-201ENST00000368440 PGFP49763 221 aa15.93■□□□□ 0.14
SMPDL3A-201ENST00000368440 PDE4CQ08493 712 aa15.93■□□□□ 0.14
SMPDL3A-201ENST00000368440 TDGQ13569 410 aa15.93■□□□□ 0.14
SMPDL3A-201ENST00000368440 RAPGEF1Q13905 1077 aa15.93■□□□□ 0.14
SMPDL3A-201ENST00000368440 PKDCCQ504Y2 493 aa15.93■□□□□ 0.14
SMPDL3A-201ENST00000368440 LCLAT1Q6UWP7 414 aa15.93■□□□□ 0.14
SMPDL3A-201ENST00000368440 ARID3BQ8IVW6 561 aaPredicted RBP15.93■□□□□ 0.14
SMPDL3A-201ENST00000368440 FBXO32Q969P5 355 aa15.93■□□□□ 0.14
SMPDL3A-201ENST00000368440 TRPC7Q9HCX4 862 aa15.93■□□□□ 0.14
SMPDL3A-201ENST00000368440 PLCB1Q9NQ66 1216 aa15.93■□□□□ 0.14
SMPDL3A-201ENST00000368440 FAM207AQ9NSI2 230 aaPredicted RBP15.93■□□□□ 0.14
SMPDL3A-201ENST00000368440 KIF26AQ9ULI4 1882 aaPredicted RBP15.93■□□□□ 0.14
SMPDL3A-201ENST00000368440 FAM92AA1XBS5 289 aa15.92■□□□□ 0.14
SMPDL3A-201ENST00000368440 FOXN3O00409 490 aaPredicted RBP15.92■□□□□ 0.14
SMPDL3A-201ENST00000368440 CFHP08603 1231 aa15.92■□□□□ 0.14
SMPDL3A-201ENST00000368440 BCAT1P54687 386 aa15.92■□□□□ 0.14
SMPDL3A-201ENST00000368440 ZXDAP98168 799 aa15.92■□□□□ 0.14
SMPDL3A-201ENST00000368440 DRAP1Q14919 205 aaPredicted RBP15.92■□□□□ 0.14
SMPDL3A-201ENST00000368440 VITQ6UXI7 678 aa15.92■□□□□ 0.14
SMPDL3A-201ENST00000368440 PIGZQ86VD9 579 aa15.92■□□□□ 0.14
SMPDL3A-201ENST00000368440 CMTM8Q8IZV2 173 aa15.92■□□□□ 0.14
SMPDL3A-201ENST00000368440 NXPE3Q969Y0 559 aa15.92■□□□□ 0.14
SMPDL3A-201ENST00000368440 ELSPBP1Q96BH3 223 aa15.92■□□□□ 0.14
SMPDL3A-201ENST00000368440 CYP2S1Q96SQ9 504 aa15.92■□□□□ 0.14
SMPDL3A-201ENST00000368440 TRPV4Q9HBA0 871 aa15.92■□□□□ 0.14
SMPDL3A-201ENST00000368440 PNPLA8Q9NP80 782 aa15.92■□□□□ 0.14
SMPDL3A-201ENST00000368440 EHD2Q9NZN4 543 aa15.92■□□□□ 0.14
SMPDL3A-201ENST00000368440 TRPM5Q9NZQ8 1165 aa15.92■□□□□ 0.14
SMPDL3A-201ENST00000368440 GMIPQ9P107 970 aa15.92■□□□□ 0.14
SMPDL3A-201ENST00000368440 HESX1Q9UBX0 185 aa15.92■□□□□ 0.14
SMPDL3A-201ENST00000368440 CHORDC1Q9UHD1 332 aaPredicted RBP15.92■□□□□ 0.14
SMPDL3A-201ENST00000368440 COL4A2P08572 1712 aa15.91■□□□□ 0.14
SMPDL3A-201ENST00000368440 ZNF840PA6NDX5 716 aa15.91■□□□□ 0.14
SMPDL3A-201ENST00000368440 M0QYV0 167 aa15.91■□□□□ 0.14
SMPDL3A-201ENST00000368440 CYP26A1O43174 497 aa15.91■□□□□ 0.14
SMPDL3A-201ENST00000368440 ECI2O75521 394 aa15.91■□□□□ 0.14
SMPDL3A-201ENST00000368440 GNA15P30679 374 aa15.91■□□□□ 0.14
SMPDL3A-201ENST00000368440 BST2Q10589 180 aaKnown RBP15.91■□□□□ 0.14
SMPDL3A-201ENST00000368440 CNGA2Q16280 664 aa15.91■□□□□ 0.14
SMPDL3A-201ENST00000368440 MON1AQ86VX9 555 aa15.91■□□□□ 0.14
SMPDL3A-201ENST00000368440 ANP32BQ92688 251 aaKnown RBP15.91■□□□□ 0.14
SMPDL3A-201ENST00000368440 NAP1L5Q96NT1 182 aaPredicted RBP15.91■□□□□ 0.14
SMPDL3A-201ENST00000368440 LRRC3BQ96PB8 259 aa15.91■□□□□ 0.14
SMPDL3A-201ENST00000368440 SLITRK1Q96PX8 696 aa15.91■□□□□ 0.14
SMPDL3A-201ENST00000368440 ZFP14Q9HCL3 533 aa15.91■□□□□ 0.14
SMPDL3A-201ENST00000368440 RTN4Q9NQC3 1192 aaKnown RBP15.91■□□□□ 0.14
SMPDL3A-201ENST00000368440 DUSP12Q9UNI6 340 aa15.91■□□□□ 0.14
SMPDL3A-201ENST00000368440 CCL26Q9Y258 94 aa15.91■□□□□ 0.14
SMPDL3A-201ENST00000368440 CUL9Q8IWT3 2517 aa15.91■□□□□ 0.14
SMPDL3A-201ENST00000368440 COL4A3Q01955 1670 aa15.91■□□□□ 0.14
SMPDL3A-201ENST00000368440 XPO1O14980 1071 aaKnown RBP15.91■□□□□ 0.14
SMPDL3A-201ENST00000368440 CAVIN2O95810 425 aa15.91■□□□□ 0.14
SMPDL3A-201ENST00000368440 ABL1P00519 1130 aa15.91■□□□□ 0.14
SMPDL3A-201ENST00000368440 DDX6P26196 483 aaKnown RBP eCLIP15.91■□□□□ 0.14
SMPDL3A-201ENST00000368440 CLCN1P35523 988 aa15.91■□□□□ 0.14
SMPDL3A-201ENST00000368440 KIF11P52732 1056 aa15.91■□□□□ 0.14
SMPDL3A-201ENST00000368440 GRM2Q14416 872 aa15.91■□□□□ 0.14
SMPDL3A-201ENST00000368440 RIN3Q8TB24 985 aa15.91■□□□□ 0.14
SMPDL3A-201ENST00000368440 EDAQ92838 391 aa15.91■□□□□ 0.14
SMPDL3A-201ENST00000368440 SECISBP2LQ93073 1101 aaKnown RBP15.91■□□□□ 0.14
SMPDL3A-201ENST00000368440 ERGIC2Q96RQ1 377 aa15.91■□□□□ 0.14
SMPDL3A-201ENST00000368440 COMMD8Q9NX08 183 aa15.91■□□□□ 0.14
SMPDL3A-201ENST00000368440 TICRRQ7Z2Z1 1910 aa15.9■□□□□ 0.14
SMPDL3A-201ENST00000368440 HEPACAM2A8MVW5 462 aa15.9■□□□□ 0.14
SMPDL3A-201ENST00000368440 THAP12O43422 761 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms