RNA–Protein interactions for RNA: ENST00000368300.8

LMNA-206, Transcript of lamin A/C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMNA, Length 3,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-206ENST00000368300 SOX4Q06945 474 aaPredicted RBP12.9□□□□□ -0.34
LMNA-206ENST00000368300 ZC3H12AQ5D1E8 599 aaKnown RBP12.9□□□□□ -0.34
LMNA-206ENST00000368300 ANKRD22Q5VYY1 191 aa12.9□□□□□ -0.34
LMNA-206ENST00000368300 C9orf57Q5W0N0 161 aa12.9□□□□□ -0.34
LMNA-206ENST00000368300 C1orf228Q6PIY5 440 aa12.9□□□□□ -0.34
LMNA-206ENST00000368300 POLNQ7Z5Q5 900 aa12.9□□□□□ -0.34
LMNA-206ENST00000368300 TADA2BQ86TJ2 420 aa12.9□□□□□ -0.34
LMNA-206ENST00000368300 ARRDC4Q8NCT1 418 aa12.9□□□□□ -0.34
LMNA-206ENST00000368300 FNIP1Q8TF40 1166 aa12.9□□□□□ -0.34
LMNA-206ENST00000368300 PRMT1Q99873 361 aaKnown RBP12.9□□□□□ -0.34
LMNA-206ENST00000368300 SMIM28A0A1B0GU29 152 aa12.89□□□□□ -0.35
LMNA-206ENST00000368300 UNCXA6NJT0 531 aa12.89□□□□□ -0.35
LMNA-206ENST00000368300 C2CD4BA6NLJ0 364 aa12.89□□□□□ -0.35
LMNA-206ENST00000368300 ZNF143P52747 638 aaPredicted RBP12.89□□□□□ -0.35
LMNA-206ENST00000368300 CAV1Q03135 178 aa12.89□□□□□ -0.35
LMNA-206ENST00000368300 LMNB2Q03252 620 aa12.89□□□□□ -0.35
LMNA-206ENST00000368300 ZBTB6Q15916 424 aa12.89□□□□□ -0.35
LMNA-206ENST00000368300 ANKRD42Q8N9B4 389 aa12.89□□□□□ -0.35
LMNA-206ENST00000368300 BEST2Q8NFU1 509 aa12.89□□□□□ -0.35
LMNA-206ENST00000368300 KCNK9Q9NPC2 374 aa12.89□□□□□ -0.35
LMNA-206ENST00000368300 INTS9Q9NV88 658 aaKnown RBP12.89□□□□□ -0.35
LMNA-206ENST00000368300 TPX2Q9ULW0 747 aaKnown RBP12.89□□□□□ -0.35
LMNA-206ENST00000368300 TCRBV7S3A2A0A539 114 aa12.89□□□□□ -0.35
LMNA-206ENST00000368300 MYADML2A6NDP7 307 aa12.89□□□□□ -0.35
LMNA-206ENST00000368300 KIF1CO43896 1103 aaKnown RBP12.89□□□□□ -0.35
LMNA-206ENST00000368300 IFT88Q13099 833 aa12.89□□□□□ -0.35
LMNA-206ENST00000368300 CCDC14Q49A88 953 aa12.89□□□□□ -0.35
LMNA-206ENST00000368300 TAX1BP1Q86VP1 789 aa12.89□□□□□ -0.35
LMNA-206ENST00000368300 CCDC13Q8IYE1 715 aa12.89□□□□□ -0.35
LMNA-206ENST00000368300 ZCCHC9Q8N567 271 aaKnown RBP12.89□□□□□ -0.35
LMNA-206ENST00000368300 NDRG1Q92597 394 aaKnown RBP12.89□□□□□ -0.35
LMNA-206ENST00000368300 N4BP2L2Q92802 583 aaPredicted RBP12.89□□□□□ -0.35
LMNA-206ENST00000368300 NKD2Q969F2 451 aaPredicted RBP12.89□□□□□ -0.35
LMNA-206ENST00000368300 TMEM109Q9BVC6 243 aa12.89□□□□□ -0.35
LMNA-206ENST00000368300 ASNSD1Q9NWL6 643 aa12.89□□□□□ -0.35
LMNA-206ENST00000368300 SMIM35A0A1B0GVV1 85 aa12.89□□□□□ -0.35
LMNA-206ENST00000368300 MBLAC1A4D2B0 266 aaPredicted RBP12.89□□□□□ -0.35
LMNA-206ENST00000368300 MEIS3P2A8K0S8 358 aa12.89□□□□□ -0.35
LMNA-206ENST00000368300 PAPSS1O43252 624 aaPredicted RBP12.89□□□□□ -0.35
LMNA-206ENST00000368300 CA9Q16790 459 aa12.89□□□□□ -0.35
LMNA-206ENST00000368300 ERMARDQ5T6L9 678 aa12.89□□□□□ -0.35
LMNA-206ENST00000368300 BBS12Q6ZW61 710 aa12.89□□□□□ -0.35
LMNA-206ENST00000368300 CYP4V2Q6ZWL3 525 aaPredicted RBP12.89□□□□□ -0.35
LMNA-206ENST00000368300 CPLX4Q7Z7G2 160 aa12.89□□□□□ -0.35
LMNA-206ENST00000368300 ZBED8Q8IZ13 594 aa12.89□□□□□ -0.35
LMNA-206ENST00000368300 CMASQ8NFW8 434 aaPredicted RBP12.89□□□□□ -0.35
LMNA-206ENST00000368300 RSAD2Q8WXG1 361 aa12.89□□□□□ -0.35
LMNA-206ENST00000368300 ZFP42Q96MM3 310 aa12.89□□□□□ -0.35
LMNA-206ENST00000368300 CNPY3Q9BT09 278 aa12.89□□□□□ -0.35
LMNA-206ENST00000368300 FAM129AQ9BZQ8 928 aa12.89□□□□□ -0.35
LMNA-206ENST00000368300 DRG1Q9Y295 367 aaKnown RBP12.89□□□□□ -0.35
LMNA-206ENST00000368300 CITO14578 2027 aa12.88□□□□□ -0.35
LMNA-206ENST00000368300 POC1B-GALNT4F8VUJ3 575 aa12.88□□□□□ -0.35
LMNA-206ENST00000368300 ITGAVP06756 1048 aa12.88□□□□□ -0.35
LMNA-206ENST00000368300 LCP1P13796 627 aa12.88□□□□□ -0.35
LMNA-206ENST00000368300 RDXP35241 583 aaKnown RBP12.88□□□□□ -0.35
LMNA-206ENST00000368300 CTCFP49711 727 aaPredicted RBP12.88□□□□□ -0.35
LMNA-206ENST00000368300 CORO7P57737 925 aa12.88□□□□□ -0.35
LMNA-206ENST00000368300 EIF3EP60228 445 aaKnown RBP12.88□□□□□ -0.35
LMNA-206ENST00000368300 DRICH1Q6PGQ1 229 aaPredicted RBP12.88□□□□□ -0.35
LMNA-206ENST00000368300 BBOF1Q8ND07 529 aa12.88□□□□□ -0.35
LMNA-206ENST00000368300 SPATA18Q8TC71 538 aa12.88□□□□□ -0.35
LMNA-206ENST00000368300 ATXN2LQ8WWM7 1075 aaKnown RBP12.88□□□□□ -0.35
LMNA-206ENST00000368300 KHSRPQ92945 711 aaKnown RBP eCLIP12.88□□□□□ -0.35
LMNA-206ENST00000368300 VPS37BQ9H9H4 285 aa12.88□□□□□ -0.35
LMNA-206ENST00000368300 PLEKHA5Q9HAU0 1116 aa12.88□□□□□ -0.35
LMNA-206ENST00000368300 DDX20Q9UHI6 824 aaKnown RBP12.88□□□□□ -0.35
LMNA-206ENST00000368300 NAALADL1Q9UQQ1 740 aa12.88□□□□□ -0.35
LMNA-206ENST00000368300 TRIP12Q14669 1992 aaPredicted RBP12.88□□□□□ -0.35
LMNA-206ENST00000368300 PRPSAP2O60256 369 aa12.88□□□□□ -0.35
LMNA-206ENST00000368300 ATP2C2O75185 946 aa12.88□□□□□ -0.35
LMNA-206ENST00000368300 RBP3P10745 1247 aa12.88□□□□□ -0.35
LMNA-206ENST00000368300 RPL22P35268 128 aaKnown RBP12.88□□□□□ -0.35
LMNA-206ENST00000368300 AFF1P51825 1210 aaKnown RBP12.88□□□□□ -0.35
LMNA-206ENST00000368300 RABGGTBP53611 331 aa12.88□□□□□ -0.35
LMNA-206ENST00000368300 PDIA2Q13087 525 aaKnown RBP12.88□□□□□ -0.35
LMNA-206ENST00000368300 MPP2Q14168 576 aa12.88□□□□□ -0.35
LMNA-206ENST00000368300 RNF187Q5TA31 235 aaPredicted RBP12.88□□□□□ -0.35
LMNA-206ENST00000368300 RNASEH2BQ5TBB1 312 aaKnown RBP12.88□□□□□ -0.35
LMNA-206ENST00000368300 ALKAL1Q6UXT8 129 aa12.88□□□□□ -0.35
LMNA-206ENST00000368300 SRRM1Q8IYB3 904 aaKnown RBP12.88□□□□□ -0.35
LMNA-206ENST00000368300 FAM172AQ8WUF8 416 aa12.88□□□□□ -0.35
LMNA-206ENST00000368300 MAK16Q9BXY0 300 aaKnown RBP12.88□□□□□ -0.35
LMNA-206ENST00000368300 ROPN1BQ9BZX4 212 aaPredicted RBP12.88□□□□□ -0.35
LMNA-206ENST00000368300 AP5M1Q9H0R1 490 aa12.88□□□□□ -0.35
LMNA-206ENST00000368300 CNOT10Q9H9A5 744 aaKnown RBP12.88□□□□□ -0.35
LMNA-206ENST00000368300 ROPN1Q9HAT0 212 aaPredicted RBP12.88□□□□□ -0.35
LMNA-206ENST00000368300 IRAK4Q9NWZ3 460 aa12.88□□□□□ -0.35
LMNA-206ENST00000368300 HESX1Q9UBX0 185 aa12.88□□□□□ -0.35
LMNA-206ENST00000368300 SCN4AP35499 1836 aa12.88□□□□□ -0.35
LMNA-206ENST00000368300 TMEM120BA0PK00 339 aa12.87□□□□□ -0.35
LMNA-206ENST00000368300 CTSHP09668 335 aa12.87□□□□□ -0.35
LMNA-206ENST00000368300 C6orf222P0C671 652 aaPredicted RBP12.87□□□□□ -0.35
LMNA-206ENST00000368300 ACAT1P24752 427 aaKnown RBP12.87□□□□□ -0.35
LMNA-206ENST00000368300 HNRNPH1P31943 449 aaKnown RBP12.87□□□□□ -0.35
LMNA-206ENST00000368300 ADAM17P78536 824 aa12.87□□□□□ -0.35
LMNA-206ENST00000368300 MSS51Q4VC12 460 aa12.87□□□□□ -0.35
LMNA-206ENST00000368300 TNFAIP8L3Q5GJ75 292 aa12.87□□□□□ -0.35
LMNA-206ENST00000368300 PPP6R3Q5H9R7 873 aaPredicted RBP12.87□□□□□ -0.35
LMNA-206ENST00000368300 FBXO47Q5MNV8 452 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms