RNA–Protein interactions for RNA: ENST00000368299.7

LMNA-205, Transcript of lamin A/C, humanhuman

TSL 1 (best) BASIC

Gene LMNA, Length 2,253 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-205ENST00000368299 PDE4CQ08493 712 aa18.3■□□□□ 0.52
LMNA-205ENST00000368299 MORF4L2Q15014 288 aa18.3■□□□□ 0.52
LMNA-205ENST00000368299 BOLA3Q53S33 107 aa18.3■□□□□ 0.52
LMNA-205ENST00000368299 SPATS2Q86XZ4 545 aaKnown RBP18.3■□□□□ 0.52
LMNA-205ENST00000368299 HACE1Q8IYU2 909 aa18.3■□□□□ 0.52
LMNA-205ENST00000368299 TOP6BLQ8N6T0 577 aa18.3■□□□□ 0.52
LMNA-205ENST00000368299 HSPH1Q92598 858 aa18.3■□□□□ 0.52
LMNA-205ENST00000368299 HAUS1Q96CS2 278 aa18.3■□□□□ 0.52
LMNA-205ENST00000368299 TBCBQ99426 244 aa18.3■□□□□ 0.52
LMNA-205ENST00000368299 MAK16Q9BXY0 300 aaKnown RBP18.3■□□□□ 0.52
LMNA-205ENST00000368299 UPF3AQ9H1J1 476 aaKnown RBP18.3■□□□□ 0.52
LMNA-205ENST00000368299 TRPV2Q9Y5S1 764 aa18.3■□□□□ 0.52
LMNA-205ENST00000368299 TRIP12Q14669 1992 aaPredicted RBP18.3■□□□□ 0.52
LMNA-205ENST00000368299 MYADML2A6NDP7 307 aa18.29■□□□□ 0.52
LMNA-205ENST00000368299 ACSL3O95573 720 aa18.29■□□□□ 0.52
LMNA-205ENST00000368299 GPS1Q13098 491 aa18.29■□□□□ 0.52
LMNA-205ENST00000368299 ARCQ7LC44 396 aa18.29■□□□□ 0.52
LMNA-205ENST00000368299 PCGF5Q86SE9 256 aa18.29■□□□□ 0.52
LMNA-205ENST00000368299 RFX6Q8HWS3 928 aa18.29■□□□□ 0.52
LMNA-205ENST00000368299 SERPINB12Q96P63 405 aa18.29■□□□□ 0.52
LMNA-205ENST00000368299 TMEM121Q9BTD3 319 aa18.29■□□□□ 0.52
LMNA-205ENST00000368299 DDX23Q9BUQ8 820 aaKnown RBP18.29■□□□□ 0.52
LMNA-205ENST00000368299 ADAM7Q9H2U9 754 aa18.29■□□□□ 0.52
LMNA-205ENST00000368299 LRRC4CQ9HCJ2 640 aa18.29■□□□□ 0.52
LMNA-205ENST00000368299 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.29■□□□□ 0.52
LMNA-205ENST00000368299 DCDC2CA8MYV0 355 aa18.29■□□□□ 0.52
LMNA-205ENST00000368299 PIK3R2O00459 728 aa18.29■□□□□ 0.52
LMNA-205ENST00000368299 SPTLC1O15269 473 aa18.29■□□□□ 0.52
LMNA-205ENST00000368299 TCEA3O75764 348 aa18.29■□□□□ 0.52
LMNA-205ENST00000368299 CTGFP29279 349 aa18.29■□□□□ 0.52
LMNA-205ENST00000368299 ACADSBP45954 432 aa18.29■□□□□ 0.52
LMNA-205ENST00000368299 RPL34P49207 117 aaKnown RBP18.29■□□□□ 0.52
LMNA-205ENST00000368299 DYNLT1P63172 113 aa18.29■□□□□ 0.52
LMNA-205ENST00000368299 NKX3-2P78367 333 aa18.29■□□□□ 0.52
LMNA-205ENST00000368299 TFDP2Q14188 446 aa18.29■□□□□ 0.52
LMNA-205ENST00000368299 PDK2Q15119 407 aa18.29■□□□□ 0.52
LMNA-205ENST00000368299 PTGISQ16647 500 aa18.29■□□□□ 0.52
LMNA-205ENST00000368299 CCDC14Q49A88 953 aa18.29■□□□□ 0.52
LMNA-205ENST00000368299 FAM47CQ5HY64 1035 aa18.29■□□□□ 0.52
LMNA-205ENST00000368299 TRNP1Q6NT89 227 aa18.29■□□□□ 0.52
LMNA-205ENST00000368299 VSIG1Q86XK7 387 aa18.29■□□□□ 0.52
LMNA-205ENST00000368299 TEKT4Q8WW24 435 aa18.29■□□□□ 0.52
LMNA-205ENST00000368299 PIWIL1Q96J94 861 aaKnown RBP18.29■□□□□ 0.52
LMNA-205ENST00000368299 CALN1Q9BXU9 219 aa18.29■□□□□ 0.52
LMNA-205ENST00000368299 DPEP3Q9H4B8 488 aa18.29■□□□□ 0.52
LMNA-205ENST00000368299 CHST12Q9NRB3 414 aa18.29■□□□□ 0.52
LMNA-205ENST00000368299 SHOC2Q9UQ13 582 aa18.29■□□□□ 0.52
LMNA-205ENST00000368299 PAPSS1O43252 624 aaPredicted RBP18.28■□□□□ 0.52
LMNA-205ENST00000368299 CD48P09326 243 aa18.28■□□□□ 0.52
LMNA-205ENST00000368299 ATP5DP30049 168 aa18.28■□□□□ 0.52
LMNA-205ENST00000368299 LILRA4P59901 499 aa18.28■□□□□ 0.52
LMNA-205ENST00000368299 SOX4Q06945 474 aaPredicted RBP18.28■□□□□ 0.52
LMNA-205ENST00000368299 TNFAIP8L3Q5GJ75 292 aa18.28■□□□□ 0.52
LMNA-205ENST00000368299 SCUBE3Q8IX30 993 aa18.28■□□□□ 0.52
LMNA-205ENST00000368299 ADGRF2Q8IZF7 708 aa18.28■□□□□ 0.52
LMNA-205ENST00000368299 GLIS1Q8NBF1 620 aa18.28■□□□□ 0.52
LMNA-205ENST00000368299 ARRDC4Q8NCT1 418 aa18.28■□□□□ 0.52
LMNA-205ENST00000368299 HSFY1Q96LI6 401 aa18.28■□□□□ 0.52
LMNA-205ENST00000368299 PEBP4Q96S96 227 aa18.28■□□□□ 0.52
LMNA-205ENST00000368299 RBM15Q96T37 977 aaKnown RBP eCLIP18.28■□□□□ 0.526e-7■■□□□ 14.4
LMNA-205ENST00000368299 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.28■□□□□ 0.52
LMNA-205ENST00000368299 SLC38A7Q9NVC3 462 aa18.28■□□□□ 0.52
LMNA-205ENST00000368299 NINJ2Q9NZG7 142 aa18.28■□□□□ 0.52
LMNA-205ENST00000368299 CDY2AQ9Y6F7 541 aa18.28■□□□□ 0.52
LMNA-205ENST00000368299 GRAP2O75791 330 aa18.28■□□□□ 0.52
LMNA-205ENST00000368299 FGFR1P11362 822 aa18.28■□□□□ 0.52
LMNA-205ENST00000368299 WARSP23381 471 aaKnown RBP18.28■□□□□ 0.52
LMNA-205ENST00000368299 CDH6P55285 790 aa18.28■□□□□ 0.52
LMNA-205ENST00000368299 KYNUQ16719 465 aa18.28■□□□□ 0.52
LMNA-205ENST00000368299 C15orf59Q2T9L4 293 aaPredicted RBP18.28■□□□□ 0.52
LMNA-205ENST00000368299 NBPF20Q3BBV1 942 aa18.28■□□□□ 0.52
LMNA-205ENST00000368299 UBAP2Q5T6F2 1119 aaKnown RBP18.28■□□□□ 0.52
LMNA-205ENST00000368299 TAOK1Q7L7X3 1001 aa18.28■□□□□ 0.52
LMNA-205ENST00000368299 UHMK1Q8TAS1 419 aaKnown RBP18.28■□□□□ 0.52
LMNA-205ENST00000368299 EPS8L3Q8TE67 593 aaKnown RBP18.28■□□□□ 0.52
LMNA-205ENST00000368299 CCDC77Q9BR77 488 aa18.28■□□□□ 0.52
LMNA-205ENST00000368299 RNF19AQ9NV58 838 aa18.28■□□□□ 0.52
LMNA-205ENST00000368299 SMIM23A6NLE4 172 aa18.27■□□□□ 0.52
LMNA-205ENST00000368299 MCF2LO15068 1137 aa18.27■□□□□ 0.52
LMNA-205ENST00000368299 IFNB1P01574 187 aa18.27■□□□□ 0.52
LMNA-205ENST00000368299 PDGFRBP09619 1106 aa18.27■□□□□ 0.52
LMNA-205ENST00000368299 RARBP10826 455 aa18.27■□□□□ 0.52
LMNA-205ENST00000368299 PSMC4P43686 418 aa18.27■□□□□ 0.52
LMNA-205ENST00000368299 AUHQ13825 339 aaKnown RBP18.27■□□□□ 0.52
LMNA-205ENST00000368299 TAF5Q15542 800 aa18.27■□□□□ 0.52
LMNA-205ENST00000368299 CDO1Q16878 200 aa18.27■□□□□ 0.52
LMNA-205ENST00000368299 SH3PXD2AQ5TCZ1 1133 aa18.27■□□□□ 0.52
LMNA-205ENST00000368299 CXCL17Q6UXB2 119 aa18.27■□□□□ 0.52
LMNA-205ENST00000368299 CYP4V2Q6ZWL3 525 aaPredicted RBP18.27■□□□□ 0.52
LMNA-205ENST00000368299 SLC26A9Q7LBE3 791 aa18.27■□□□□ 0.52
LMNA-205ENST00000368299 PRUNE1Q86TP1 453 aa18.27■□□□□ 0.52
LMNA-205ENST00000368299 RPAINQ86UA6 219 aa18.27■□□□□ 0.52
LMNA-205ENST00000368299 RSAD2Q8WXG1 361 aa18.27■□□□□ 0.52
LMNA-205ENST00000368299 CFAP57Q96MR6 1250 aa18.27■□□□□ 0.52
LMNA-205ENST00000368299 TTC25Q96NG3 672 aa18.27■□□□□ 0.52
LMNA-205ENST00000368299 PPP1R10Q96QC0 940 aaKnown RBP18.27■□□□□ 0.52
LMNA-205ENST00000368299 SMAPO00193 183 aa18.26■□□□□ 0.51
LMNA-205ENST00000368299 PTGESO14684 152 aa18.26■□□□□ 0.51
LMNA-205ENST00000368299 SEPT4O43236 478 aa18.26■□□□□ 0.51
LMNA-205ENST00000368299 ABHD2P08910 425 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms