RNA–Protein interactions for RNA: ENST00000367279.8

PTPN7-202, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN7, Length 3,265 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-202ENST00000367279 MICAL2O94851 1124 aa12.88□□□□□ -0.35
PTPN7-202ENST00000367279 PDGFRAP16234 1089 aa12.88□□□□□ -0.35
PTPN7-202ENST00000367279 PEX19P40855 299 aa12.88□□□□□ -0.35
PTPN7-202ENST00000367279 BMPR2Q13873 1038 aa12.88□□□□□ -0.35
PTPN7-202ENST00000367279 TREML2Q5T2D2 321 aa12.88□□□□□ -0.35
PTPN7-202ENST00000367279 IER5Q5VY09 327 aa12.88□□□□□ -0.35
PTPN7-202ENST00000367279 RFWD3Q6PCD5 774 aa12.88□□□□□ -0.35
PTPN7-202ENST00000367279 ADGRD1Q6QNK2 874 aa12.88□□□□□ -0.35
PTPN7-202ENST00000367279 CLNKQ7Z7G1 428 aa12.88□□□□□ -0.35
PTPN7-202ENST00000367279 XYLT1Q86Y38 959 aa12.88□□□□□ -0.35
PTPN7-202ENST00000367279 UBR7Q8N806 425 aa12.88□□□□□ -0.35
PTPN7-202ENST00000367279 DCAKDQ8WVC6 231 aa12.88□□□□□ -0.35
PTPN7-202ENST00000367279 CNKSR2Q8WXI2 1034 aa12.88□□□□□ -0.35
PTPN7-202ENST00000367279 PRR11Q96HE9 360 aaPredicted RBP12.88□□□□□ -0.35
PTPN7-202ENST00000367279 TMEM120AQ9BXJ8 343 aa12.88□□□□□ -0.35
PTPN7-202ENST00000367279 RNPEPL1Q9HAU8 725 aa12.88□□□□□ -0.35
PTPN7-202ENST00000367279 ARMCX1Q9P291 453 aa12.88□□□□□ -0.35
PTPN7-202ENST00000367279 TCRBV9S1A1TA0A576 114 aa12.87□□□□□ -0.35
PTPN7-202ENST00000367279 TRIM49D1C9J1S8 452 aa12.87□□□□□ -0.35
PTPN7-202ENST00000367279 COPEO14579 308 aa12.87□□□□□ -0.35
PTPN7-202ENST00000367279 PRPSAP2O60256 369 aa12.87□□□□□ -0.35
PTPN7-202ENST00000367279 ZBTB7AO95365 584 aa12.87□□□□□ -0.35
PTPN7-202ENST00000367279 APRTP07741 180 aa12.87□□□□□ -0.35
PTPN7-202ENST00000367279 MPZL3Q6UWV2 235 aa12.87□□□□□ -0.35
PTPN7-202ENST00000367279 DTX3LQ8TDB6 740 aa12.87□□□□□ -0.35
PTPN7-202ENST00000367279 MECRQ9BV79 373 aa12.87□□□□□ -0.35
PTPN7-202ENST00000367279 SDCBP2Q9H190 292 aa12.87□□□□□ -0.35
PTPN7-202ENST00000367279 ARL8BQ9NVJ2 186 aa12.87□□□□□ -0.35
PTPN7-202ENST00000367279 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.87□□□□□ -0.35
PTPN7-202ENST00000367279 ASNSD1Q9NWL6 643 aa12.87□□□□□ -0.35
PTPN7-202ENST00000367279 FER1L6Q2WGJ9 1857 aa12.87□□□□□ -0.35
PTPN7-202ENST00000367279 PEX11AO75192 247 aa12.87□□□□□ -0.35
PTPN7-202ENST00000367279 ATG7O95352 703 aa12.87□□□□□ -0.35
PTPN7-202ENST00000367279 ITGBL1O95965 494 aaPredicted RBP12.87□□□□□ -0.35
PTPN7-202ENST00000367279 GM2AP17900 193 aa12.87□□□□□ -0.35
PTPN7-202ENST00000367279 RXRBP28702 533 aa12.87□□□□□ -0.35
PTPN7-202ENST00000367279 PTPN11Q06124 597 aaPredicted RBP12.87□□□□□ -0.35
PTPN7-202ENST00000367279 RCN2Q14257 317 aa12.87□□□□□ -0.35
PTPN7-202ENST00000367279 SURF1Q15526 300 aa12.87□□□□□ -0.35
PTPN7-202ENST00000367279 CCDC62Q6P9F0 684 aa12.87□□□□□ -0.35
PTPN7-202ENST00000367279 POLNQ7Z5Q5 900 aa12.87□□□□□ -0.35
PTPN7-202ENST00000367279 COPS5Q92905 334 aa12.87□□□□□ -0.35
PTPN7-202ENST00000367279 XYLT2Q9H1B5 865 aa12.87□□□□□ -0.35
PTPN7-202ENST00000367279 DENND2DQ9H6A0 471 aaPredicted RBP12.87□□□□□ -0.35
PTPN7-202ENST00000367279 PCDHGC3Q9UN70 934 aa12.87□□□□□ -0.35
PTPN7-202ENST00000367279 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.87□□□□□ -0.35
PTPN7-202ENST00000367279 NUMBLQ9Y6R0 609 aa12.87□□□□□ -0.35
PTPN7-202ENST00000367279 APOC4-APOC2K7ER74 178 aa12.87□□□□□ -0.35
PTPN7-202ENST00000367279 APOC2P02655 101 aa12.87□□□□□ -0.35
PTPN7-202ENST00000367279 ESRRAP11474 423 aaPredicted RBP12.87□□□□□ -0.35
PTPN7-202ENST00000367279 CALB2P22676 271 aa12.87□□□□□ -0.35
PTPN7-202ENST00000367279 PTPN4P29074 926 aa12.87□□□□□ -0.35
PTPN7-202ENST00000367279 PARP6Q2NL67 630 aa12.87□□□□□ -0.35
PTPN7-202ENST00000367279 MUM1Q2TAK8 710 aa12.87□□□□□ -0.35
PTPN7-202ENST00000367279 PRPF39Q86UA1 669 aaKnown RBP12.87□□□□□ -0.35
PTPN7-202ENST00000367279 BANPQ8N9N5 519 aa12.87□□□□□ -0.35
PTPN7-202ENST00000367279 RXFP2Q8WXD0 754 aa12.87□□□□□ -0.35
PTPN7-202ENST00000367279 INPP5DQ92835 1189 aa12.87□□□□□ -0.35
PTPN7-202ENST00000367279 CPB2Q96IY4 423 aa12.87□□□□□ -0.35
PTPN7-202ENST00000367279 SLC5A4Q9NY91 659 aa12.87□□□□□ -0.35
PTPN7-202ENST00000367279 DONSONQ9NYP3 566 aa12.87□□□□□ -0.35
PTPN7-202ENST00000367279 GGA3Q9NZ52 723 aa12.87□□□□□ -0.35
PTPN7-202ENST00000367279 GINS2Q9Y248 185 aa12.87□□□□□ -0.35
PTPN7-202ENST00000367279 C2CD2LO14523 706 aa12.86□□□□□ -0.35
PTPN7-202ENST00000367279 TRUB2O95900 331 aaKnown RBP12.86□□□□□ -0.35
PTPN7-202ENST00000367279 ZBED1O96006 694 aa12.86□□□□□ -0.35
PTPN7-202ENST00000367279 MXD4Q14582 209 aaPredicted RBP12.86□□□□□ -0.35
PTPN7-202ENST00000367279 TARBP2Q15633 366 aaKnown RBP12.86□□□□□ -0.35
PTPN7-202ENST00000367279 SLC45A4Q5BKX6 768 aa12.86□□□□□ -0.35
PTPN7-202ENST00000367279 EFCAB12Q6NXP0 572 aa12.86□□□□□ -0.35
PTPN7-202ENST00000367279 NIPA2Q8N8Q9 360 aa12.86□□□□□ -0.35
PTPN7-202ENST00000367279 STK32AQ8WU08 396 aa12.86□□□□□ -0.35
PTPN7-202ENST00000367279 NAF1Q96HR8 494 aaKnown RBP12.86□□□□□ -0.35
PTPN7-202ENST00000367279 SPATA33Q96N06 139 aa12.86□□□□□ -0.35
PTPN7-202ENST00000367279 PEBP4Q96S96 227 aa12.86□□□□□ -0.35
PTPN7-202ENST00000367279 TRIM56Q9BRZ2 755 aaKnown RBP12.86□□□□□ -0.35
PTPN7-202ENST00000367279 TRIM6Q9C030 488 aaPredicted RBP12.86□□□□□ -0.35
PTPN7-202ENST00000367279 ELOVL4Q9GZR5 314 aa12.86□□□□□ -0.35
PTPN7-202ENST00000367279 BTBD7Q9P203 1132 aa12.86□□□□□ -0.35
PTPN7-202ENST00000367279 PSME4Q14997 1843 aa12.86□□□□□ -0.35
PTPN7-202ENST00000367279 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.86□□□□□ -0.35
PTPN7-202ENST00000367279 FAM237BA0A1B0GVD1 139 aa12.86□□□□□ -0.35
PTPN7-202ENST00000367279 SOWAHBA6NEL2 793 aa12.86□□□□□ -0.35
PTPN7-202ENST00000367279 LACTBL1A8MY62 500 aa12.86□□□□□ -0.35
PTPN7-202ENST00000367279 MYL2P10916 166 aa12.86□□□□□ -0.35
PTPN7-202ENST00000367279 ZNF280AP59817 542 aaPredicted RBP12.86□□□□□ -0.35
PTPN7-202ENST00000367279 JADE1Q6IE81 842 aa12.86□□□□□ -0.35
PTPN7-202ENST00000367279 DEFB132Q7Z7B7 95 aa12.86□□□□□ -0.35
PTPN7-202ENST00000367279 TTC7BQ86TV6 843 aa12.86□□□□□ -0.35
PTPN7-202ENST00000367279 ARMC2Q8NEN0 867 aa12.86□□□□□ -0.35
PTPN7-202ENST00000367279 DNERQ8NFT8 737 aa12.86□□□□□ -0.35
PTPN7-202ENST00000367279 PIWIL1Q96J94 861 aaKnown RBP12.86□□□□□ -0.35
PTPN7-202ENST00000367279 MIS12Q9H081 205 aa12.86□□□□□ -0.35
PTPN7-202ENST00000367279 R3HDMLQ9H3Y0 253 aa12.86□□□□□ -0.35
PTPN7-202ENST00000367279 MINDY3Q9H8M7 445 aa12.86□□□□□ -0.35
PTPN7-202ENST00000367279 RSAD1Q9HA92 442 aa12.86□□□□□ -0.35
PTPN7-202ENST00000367279 PPCSQ9HAB8 311 aa12.86□□□□□ -0.35
PTPN7-202ENST00000367279 PHIPQ8WWQ0 1821 aa12.86□□□□□ -0.35
PTPN7-202ENST00000367279 TM9SF1O15321 606 aa12.86□□□□□ -0.35
PTPN7-202ENST00000367279 FAM189A1O60320 539 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms