RNA–Protein interactions for RNA: ENST00000367042.5

CD46-208, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,326 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-208ENST00000367042 VCPIP1Q96JH7 1222 aa8.54□□□□□ -1.04
CD46-208ENST00000367042 FBXL18Q96ME1 805 aa8.54□□□□□ -1.04
CD46-208ENST00000367042 PPP1R16BQ96T49 567 aa8.54□□□□□ -1.04
CD46-208ENST00000367042 XPNPEP1Q9NQW7 623 aa8.54□□□□□ -1.04
CD46-208ENST00000367042 KANSL3Q9P2N6 904 aa8.54□□□□□ -1.04
CD46-208ENST00000367042 ZC3H7BQ9UGR2 993 aaKnown RBP8.54□□□□□ -1.04
CD46-208ENST00000367042 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.54□□□□□ -1.04
CD46-208ENST00000367042 MAGEA13PA6NCF6 341 aa8.54□□□□□ -1.04
CD46-208ENST00000367042 E5RJQ4 531 aa8.54□□□□□ -1.04
CD46-208ENST00000367042 NDC80O14777 642 aa8.54□□□□□ -1.04
CD46-208ENST00000367042 NCF2P19878 526 aaPredicted RBP8.54□□□□□ -1.04
CD46-208ENST00000367042 CDH8P55286 799 aa8.54□□□□□ -1.04
CD46-208ENST00000367042 ACTR2P61160 394 aa8.54□□□□□ -1.04
CD46-208ENST00000367042 FAM102AQ5T9C2 384 aaPredicted RBP8.54□□□□□ -1.04
CD46-208ENST00000367042 SNRNP48Q6IEG0 339 aaKnown RBP8.54□□□□□ -1.04
CD46-208ENST00000367042 RIPOR1Q6ZS17 1223 aa8.54□□□□□ -1.04
CD46-208ENST00000367042 RSPH3Q86UC2 560 aa8.54□□□□□ -1.04
CD46-208ENST00000367042 RASSF3Q86WH2 238 aa8.54□□□□□ -1.04
CD46-208ENST00000367042 TTC13Q8NBP0 860 aa8.54□□□□□ -1.04
CD46-208ENST00000367042 USP6NLQ92738 828 aa8.54□□□□□ -1.04
CD46-208ENST00000367042 ATG4CQ96DT6 458 aa8.54□□□□□ -1.04
CD46-208ENST00000367042 TRIM56Q9BRZ2 755 aaKnown RBP8.54□□□□□ -1.04
CD46-208ENST00000367042 NGRNQ9NPE2 291 aaKnown RBP8.54□□□□□ -1.04
CD46-208ENST00000367042 STAU2Q9NUL3 570 aaKnown RBP eCLIP8.54□□□□□ -1.04
CD46-208ENST00000367042 PIH1D1Q9NWS0 290 aaKnown RBP8.54□□□□□ -1.04
CD46-208ENST00000367042 LNPEPQ9UIQ6 1025 aa8.54□□□□□ -1.04
CD46-208ENST00000367042 ZNRF3Q9ULT6 936 aa8.54□□□□□ -1.04
CD46-208ENST00000367042 G3BP2Q9UN86 482 aaKnown RBP8.54□□□□□ -1.04
CD46-208ENST00000367042 DRG1Q9Y295 367 aaKnown RBP8.54□□□□□ -1.04
CD46-208ENST00000367042 ZNF536O15090 1300 aa8.53□□□□□ -1.04
CD46-208ENST00000367042 H0YCG3 227 aa8.53□□□□□ -1.04
CD46-208ENST00000367042 TOP3BO95985 862 aaKnown RBP8.53□□□□□ -1.04
CD46-208ENST00000367042 IL1R2P27930 398 aa8.53□□□□□ -1.04
CD46-208ENST00000367042 ATG16L1Q676U5 607 aa8.53□□□□□ -1.04
CD46-208ENST00000367042 CIAPIN1Q6FI81 312 aa8.53□□□□□ -1.04
CD46-208ENST00000367042 TAS1R3Q7RTX0 852 aa8.53□□□□□ -1.04
CD46-208ENST00000367042 SAMD3Q8N6K7 520 aa8.53□□□□□ -1.04
CD46-208ENST00000367042 SH3TC2Q8TF17 1288 aa8.53□□□□□ -1.04
CD46-208ENST00000367042 DCAKDQ8WVC6 231 aa8.53□□□□□ -1.04
CD46-208ENST00000367042 WWP1Q9H0M0 922 aa8.53□□□□□ -1.04
CD46-208ENST00000367042 RPAP3Q9H6T3 665 aaPredicted RBP8.53□□□□□ -1.04
CD46-208ENST00000367042 GPATCH2LQ9NWQ4 482 aa8.53□□□□□ -1.04
CD46-208ENST00000367042 MAGED2Q9UNF1 606 aaPredicted RBP8.53□□□□□ -1.04
CD46-208ENST00000367042 TNS1Q9HBL0 1735 aaKnown RBP8.53□□□□□ -1.04
CD46-208ENST00000367042 LRCH4O75427 683 aa8.53□□□□□ -1.04
CD46-208ENST00000367042 PDE5AO76074 875 aa8.53□□□□□ -1.04
CD46-208ENST00000367042 LYPLA2O95372 231 aa8.53□□□□□ -1.04
CD46-208ENST00000367042 ZBED1O96006 694 aa8.53□□□□□ -1.04
CD46-208ENST00000367042 FESP07332 822 aa8.53□□□□□ -1.04
CD46-208ENST00000367042 KDELR1P24390 212 aa8.53□□□□□ -1.04
CD46-208ENST00000367042 SLC25A3Q00325 362 aa8.53□□□□□ -1.04
CD46-208ENST00000367042 DSG1Q02413 1049 aa8.53□□□□□ -1.04
CD46-208ENST00000367042 DPYSL3Q14195 570 aa8.53□□□□□ -1.04
CD46-208ENST00000367042 CTC1Q2NKJ3 1217 aa8.53□□□□□ -1.04
CD46-208ENST00000367042 GRAMD1BQ3KR37 738 aa8.53□□□□□ -1.04
CD46-208ENST00000367042 SLFN12LQ6IEE8 588 aa8.53□□□□□ -1.04
CD46-208ENST00000367042 DENND1BQ6P3S1 775 aa8.53□□□□□ -1.04
CD46-208ENST00000367042 CDHR3Q6ZTQ4 885 aa8.53□□□□□ -1.04
CD46-208ENST00000367042 ADPGKQ9BRR6 497 aa8.53□□□□□ -1.04
CD46-208ENST00000367042 PPCSQ9HAB8 311 aa8.53□□□□□ -1.04
CD46-208ENST00000367042 RIPK3Q9Y572 518 aa8.53□□□□□ -1.04
CD46-208ENST00000367042 SNCAIPQ9Y6H5 919 aa8.53□□□□□ -1.04
CD46-208ENST00000367042 PRR5-ARHGAP8B1AHC4 643 aa8.52□□□□□ -1.04
CD46-208ENST00000367042 UGT1A9O60656 530 aa8.52□□□□□ -1.04
CD46-208ENST00000367042 LDHAP00338 332 aaKnown RBP8.52□□□□□ -1.04
CD46-208ENST00000367042 ARHGAP8P85298 464 aa8.52□□□□□ -1.04
CD46-208ENST00000367042 ROR2Q01974 943 aaKnown RBP8.52□□□□□ -1.04
CD46-208ENST00000367042 ASPHQ12797 758 aa8.52□□□□□ -1.04
CD46-208ENST00000367042 OR6B2Q6IFH4 312 aa8.52□□□□□ -1.04
CD46-208ENST00000367042 C16orf46Q6P387 395 aa8.52□□□□□ -1.04
CD46-208ENST00000367042 TMPRSS6Q8IU80 811 aa8.52□□□□□ -1.04
CD46-208ENST00000367042 PHC3Q8NDX5 983 aa8.52□□□□□ -1.04
CD46-208ENST00000367042 GSTCDQ8NEC7 633 aa8.52□□□□□ -1.04
CD46-208ENST00000367042 UBA3Q8TBC4 463 aa8.52□□□□□ -1.04
CD46-208ENST00000367042 ZNF398Q8TD17 642 aa8.52□□□□□ -1.04
CD46-208ENST00000367042 DEPDC1BQ8WUY9 529 aa8.52□□□□□ -1.04
CD46-208ENST00000367042 TFAP2BQ92481 460 aa8.52□□□□□ -1.04
CD46-208ENST00000367042 NKD2Q969F2 451 aaPredicted RBP8.52□□□□□ -1.04
CD46-208ENST00000367042 ATXN7L3BQ96GX2 97 aa8.52□□□□□ -1.04
CD46-208ENST00000367042 PPP1R36Q96LQ0 422 aa8.52□□□□□ -1.04
CD46-208ENST00000367042 CGRRF1Q99675 332 aa8.52□□□□□ -1.04
CD46-208ENST00000367042 C17orf75Q9HAS0 396 aa8.52□□□□□ -1.04
CD46-208ENST00000367042 UGT1A7Q9HAW7 530 aa8.52□□□□□ -1.04
CD46-208ENST00000367042 UGT1A10Q9HAW8 530 aa8.52□□□□□ -1.04
CD46-208ENST00000367042 UGT1A8Q9HAW9 530 aa8.52□□□□□ -1.04
CD46-208ENST00000367042 ZNF277Q9NRM2 450 aaPredicted RBP8.52□□□□□ -1.04
CD46-208ENST00000367042 STX18Q9P2W9 335 aaKnown RBP8.52□□□□□ -1.04
CD46-208ENST00000367042 PACSIN3Q9UKS6 424 aa8.52□□□□□ -1.04
CD46-208ENST00000367042 POLIQ9UNA4 740 aa8.52□□□□□ -1.04
CD46-208ENST00000367042 QSER1Q2KHR3 1735 aa8.52□□□□□ -1.05
CD46-208ENST00000367042 A0A0B4J269 797 aa8.52□□□□□ -1.05
CD46-208ENST00000367042 YDJCA8MPS7 323 aa8.52□□□□□ -1.05
CD46-208ENST00000367042 M0QYV0 167 aa8.52□□□□□ -1.05
CD46-208ENST00000367042 PLSCR1O15162 318 aa8.52□□□□□ -1.05
CD46-208ENST00000367042 STK10O94804 968 aaKnown RBP8.52□□□□□ -1.05
CD46-208ENST00000367042 SNRPAP09012 282 aaKnown RBP8.52□□□□□ -1.05
CD46-208ENST00000367042 DLDP09622 509 aaKnown RBP8.52□□□□□ -1.05
CD46-208ENST00000367042 ANPEPP15144 967 aa8.52□□□□□ -1.05
CD46-208ENST00000367042 ATXN3P54252 364 aaPredicted RBP8.52□□□□□ -1.05
CD46-208ENST00000367042 AP1B1Q10567 949 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms