RNA–Protein interactions for RNA: ENST00000366740.5

MRPL55-213, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 2 BASIC

Gene MRPL55, Length 644 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-213ENST00000366740 CBWD1Q9BRT8 395 aa12.48□□□□□ -0.41
MRPL55-213ENST00000366740 PCIF1Q9H4Z3 704 aa12.48□□□□□ -0.41
MRPL55-213ENST00000366740 GDAP2Q9NXN4 497 aa12.48□□□□□ -0.41
MRPL55-213ENST00000366740 EVLQ9UI08 416 aaPredicted RBP12.48□□□□□ -0.41
MRPL55-213ENST00000366740 GTF3C4Q9UKN8 822 aa12.48□□□□□ -0.41
MRPL55-213ENST00000366740 ARHGAP26Q9UNA1 814 aa12.48□□□□□ -0.41
MRPL55-213ENST00000366740 EXOC7Q9UPT5 735 aa12.48□□□□□ -0.41
MRPL55-213ENST00000366740 ZFYVE26Q68DK2 2539 aa12.48□□□□□ -0.41
MRPL55-213ENST00000366740 CKAP5Q14008 2032 aa12.47□□□□□ -0.41
MRPL55-213ENST00000366740 NBEAQ8NFP9 2946 aa12.47□□□□□ -0.41
MRPL55-213ENST00000366740 PVALEFA0A1B0GWK0 134 aa12.47□□□□□ -0.41
MRPL55-213ENST00000366740 GOLGA8IPA6NC78 632 aa12.47□□□□□ -0.41
MRPL55-213ENST00000366740 ANTXRLA6NF34 631 aa12.47□□□□□ -0.41
MRPL55-213ENST00000366740 GOLGA8JA6NMD2 632 aa12.47□□□□□ -0.41
MRPL55-213ENST00000366740 HUS1O60921 280 aa12.47□□□□□ -0.41
MRPL55-213ENST00000366740 TOP3BO95985 862 aaKnown RBP12.47□□□□□ -0.41
MRPL55-213ENST00000366740 MAGEA11P43364 429 aa12.47□□□□□ -0.41
MRPL55-213ENST00000366740 NUCB2P80303 420 aa12.47□□□□□ -0.41
MRPL55-213ENST00000366740 ZXDBP98169 803 aa12.47□□□□□ -0.41
MRPL55-213ENST00000366740 ALCAMQ13740 583 aa12.47□□□□□ -0.41
MRPL55-213ENST00000366740 KCNB1Q14721 858 aa12.47□□□□□ -0.41
MRPL55-213ENST00000366740 CRY1Q16526 586 aa12.47□□□□□ -0.41
MRPL55-213ENST00000366740 FAM26FQ5R3K3 315 aa12.47□□□□□ -0.41
MRPL55-213ENST00000366740 ANO7Q6IWH7 933 aa12.47□□□□□ -0.41
MRPL55-213ENST00000366740 FAM171BQ6P995 826 aa12.47□□□□□ -0.41
MRPL55-213ENST00000366740 CEP57L1Q8IYX8 460 aa12.47□□□□□ -0.41
MRPL55-213ENST00000366740 SYCP3Q8IZU3 236 aa12.47□□□□□ -0.41
MRPL55-213ENST00000366740 TOP6BLQ8N6T0 577 aa12.47□□□□□ -0.41
MRPL55-213ENST00000366740 FSIP1Q8NA03 581 aa12.47□□□□□ -0.41
MRPL55-213ENST00000366740 SCFD1Q8WVM8 642 aa12.47□□□□□ -0.41
MRPL55-213ENST00000366740 FAM84AQ96KN4 292 aa12.47□□□□□ -0.41
MRPL55-213ENST00000366740 CEP295NLQ96MC4 621 aa12.47□□□□□ -0.41
MRPL55-213ENST00000366740 FAM213AQ9BRX8 229 aa12.47□□□□□ -0.41
MRPL55-213ENST00000366740 LINC00597Q9H2U6 94 aa12.47□□□□□ -0.41
MRPL55-213ENST00000366740 SLC39A2Q9NP94 309 aa12.47□□□□□ -0.41
MRPL55-213ENST00000366740 ITGA11Q9UKX5 1188 aa12.47□□□□□ -0.41
MRPL55-213ENST00000366740 AGAP1Q9UPQ3 857 aa12.47□□□□□ -0.41
MRPL55-213ENST00000366740 INVSQ9Y283 1065 aa12.47□□□□□ -0.41
MRPL55-213ENST00000366740 A0A1W2PQ27 194 aa12.46□□□□□ -0.41
MRPL55-213ENST00000366740 A0A1W2PQ64 194 aa12.46□□□□□ -0.41
MRPL55-213ENST00000366740 A0A1W2PQD8 194 aa12.46□□□□□ -0.41
MRPL55-213ENST00000366740 EIF3DO15371 548 aaKnown RBP eCLIP12.46□□□□□ -0.41
MRPL55-213ENST00000366740 TGFB1I1O43294 461 aa12.46□□□□□ -0.41
MRPL55-213ENST00000366740 HCRTO43612 131 aa12.46□□□□□ -0.41
MRPL55-213ENST00000366740 PRR29P0C7W0 189 aa12.46□□□□□ -0.41
MRPL55-213ENST00000366740 HNRNPLP14866 589 aaKnown RBP eCLIP12.46□□□□□ -0.41
MRPL55-213ENST00000366740 HDCP19113 662 aa12.46□□□□□ -0.41
MRPL55-213ENST00000366740 SPINK2P20155 84 aa12.46□□□□□ -0.41
MRPL55-213ENST00000366740 GARTP22102 1010 aa12.46□□□□□ -0.41
MRPL55-213ENST00000366740 PDE6CP51160 858 aa12.46□□□□□ -0.41
MRPL55-213ENST00000366740 IRX4P78413 519 aa12.46□□□□□ -0.41
MRPL55-213ENST00000366740 MRPS21P82921 87 aaKnown RBP12.46□□□□□ -0.41
MRPL55-213ENST00000366740 TFAMQ00059 246 aaKnown RBP12.46□□□□□ -0.41
MRPL55-213ENST00000366740 STK4Q13043 487 aa12.46□□□□□ -0.41
MRPL55-213ENST00000366740 C2orf27AQ580R0 203 aa12.46□□□□□ -0.41
MRPL55-213ENST00000366740 LIMS2Q7Z4I7 341 aa12.46□□□□□ -0.41
MRPL55-213ENST00000366740 SPATA2LQ8IUW3 424 aaPredicted RBP12.46□□□□□ -0.41
MRPL55-213ENST00000366740 ADGRF2Q8IZF7 708 aa12.46□□□□□ -0.41
MRPL55-213ENST00000366740 CACTINQ8WUQ7 758 aaKnown RBP12.46□□□□□ -0.41
MRPL55-213ENST00000366740 SPATA17Q96L03 361 aa12.46□□□□□ -0.41
MRPL55-213ENST00000366740 SCNM1Q9BWG6 230 aa12.46□□□□□ -0.41
MRPL55-213ENST00000366740 DSPP15924 2871 aaKnown RBP12.46□□□□□ -0.42
MRPL55-213ENST00000366740 NYNRINQ9P2P1 1898 aaKnown RBP12.45□□□□□ -0.42
MRPL55-213ENST00000366740 OLFM2O95897 454 aa12.45□□□□□ -0.42
MRPL55-213ENST00000366740 LDHAP00338 332 aaKnown RBP12.45□□□□□ -0.42
MRPL55-213ENST00000366740 CYP17A1P05093 508 aa12.45□□□□□ -0.42
MRPL55-213ENST00000366740 PCSK1P29120 753 aa12.45□□□□□ -0.42
MRPL55-213ENST00000366740 EIF2DP41214 584 aaKnown RBP12.45□□□□□ -0.42
MRPL55-213ENST00000366740 P2RY2P41231 377 aa12.45□□□□□ -0.42
MRPL55-213ENST00000366740 SYKP43405 635 aa12.45□□□□□ -0.42
MRPL55-213ENST00000366740 LHX1P48742 406 aa12.45□□□□□ -0.42
MRPL55-213ENST00000366740 DHPSP49366 369 aaPredicted RBP12.45□□□□□ -0.42
MRPL55-213ENST00000366740 SEC13P55735 322 aa12.45□□□□□ -0.42
MRPL55-213ENST00000366740 LMAN2Q12907 356 aa12.45□□□□□ -0.42
MRPL55-213ENST00000366740 SOWAHAQ2M3V2 549 aa12.45□□□□□ -0.42
MRPL55-213ENST00000366740 KMT5BQ4FZB7 885 aa12.45□□□□□ -0.42
MRPL55-213ENST00000366740 HSF5Q4G112 596 aaPredicted RBP12.45□□□□□ -0.42
MRPL55-213ENST00000366740 PEAR1Q5VY43 1037 aaPredicted RBP12.45□□□□□ -0.42
MRPL55-213ENST00000366740 VSTM1Q6UX27 236 aa12.45□□□□□ -0.42
MRPL55-213ENST00000366740 TMEM92Q6UXU6 159 aa12.45□□□□□ -0.42
MRPL55-213ENST00000366740 DPH6Q7L8W6 267 aa12.45□□□□□ -0.42
MRPL55-213ENST00000366740 SCN4BQ8IWT1 228 aa12.45□□□□□ -0.42
MRPL55-213ENST00000366740 NELFCDQ8IXH7 590 aa12.45□□□□□ -0.42
MRPL55-213ENST00000366740 TTC16Q8NEE8 873 aa12.45□□□□□ -0.42
MRPL55-213ENST00000366740 TTLL2Q9BWV7 592 aa12.45□□□□□ -0.42
MRPL55-213ENST00000366740 USP25Q9UHP3 1055 aa12.45□□□□□ -0.42
MRPL55-213ENST00000366740 SIX4Q9UIU6 781 aa12.45□□□□□ -0.42
MRPL55-213ENST00000366740 NEUROG3Q9Y4Z2 214 aa12.45□□□□□ -0.42
MRPL55-213ENST00000366740 SNX9Q9Y5X1 595 aa12.45□□□□□ -0.42
MRPL55-213ENST00000366740 A0A0A0MRY4 1105 aa12.44□□□□□ -0.42
MRPL55-213ENST00000366740 SRRM3A6NNA2 597 aaPredicted RBP12.44□□□□□ -0.42
MRPL55-213ENST00000366740 LEFTY2O00292 366 aa12.44□□□□□ -0.42
MRPL55-213ENST00000366740 TNFRSF10BO14763 440 aa12.44□□□□□ -0.42
MRPL55-213ENST00000366740 CLIC2O15247 247 aa12.44□□□□□ -0.42
MRPL55-213ENST00000366740 ZNF202O95125 648 aa12.44□□□□□ -0.42
MRPL55-213ENST00000366740 HOXB3P14651 431 aaPredicted RBP12.44□□□□□ -0.42
MRPL55-213ENST00000366740 SLC7A9P82251 487 aa12.44□□□□□ -0.42
MRPL55-213ENST00000366740 COL9A2Q14055 689 aaPredicted RBP12.44□□□□□ -0.42
MRPL55-213ENST00000366740 BMT2Q1RMZ1 405 aa12.44□□□□□ -0.42
MRPL55-213ENST00000366740 TRIM61Q5EBN2 209 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms