RNA–Protein interactions for RNA: ENST00000366481.3

TRIM58-201, Transcript of tripartite motif containing 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM58, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM58-201ENST00000366481 DNALI1O14645 258 aaPredicted RBP20.49■□□□□ 0.87
TRIM58-201ENST00000366481 SFNP31947 248 aa20.49■□□□□ 0.87
TRIM58-201ENST00000366481 GTF2H1P32780 548 aa20.49■□□□□ 0.87
TRIM58-201ENST00000366481 EMC2Q15006 297 aa20.49■□□□□ 0.87
TRIM58-201ENST00000366481 PRPF39Q86UA1 669 aaKnown RBP20.49■□□□□ 0.87
TRIM58-201ENST00000366481 ARID3BQ8IVW6 561 aaPredicted RBP20.49■□□□□ 0.87
TRIM58-201ENST00000366481 CTAGE3PQ8IX95 158 aa20.49■□□□□ 0.87
TRIM58-201ENST00000366481 CEP70Q8NHQ1 597 aa20.49■□□□□ 0.87
TRIM58-201ENST00000366481 VTI1AQ96AJ9 217 aa20.49■□□□□ 0.87
TRIM58-201ENST00000366481 MIS12Q9H081 205 aa20.49■□□□□ 0.87
TRIM58-201ENST00000366481 SLC9A2Q9UBY0 812 aa20.49■□□□□ 0.87
TRIM58-201ENST00000366481 K7ERI5 159 aa20.49■□□□□ 0.87
TRIM58-201ENST00000366481 PLA2G6O60733 806 aa20.49■□□□□ 0.87
TRIM58-201ENST00000366481 KCNA2P16389 499 aa20.49■□□□□ 0.87
TRIM58-201ENST00000366481 SLC1A1P43005 524 aa20.49■□□□□ 0.87
TRIM58-201ENST00000366481 NOMO3P69849 1222 aa20.49■□□□□ 0.87
TRIM58-201ENST00000366481 ZACNQ401N2 412 aa20.49■□□□□ 0.87
TRIM58-201ENST00000366481 DCUN1D2Q6PH85 259 aa20.49■□□□□ 0.87
TRIM58-201ENST00000366481 USP37Q86T82 979 aa20.49■□□□□ 0.87
TRIM58-201ENST00000366481 DEPTORQ8TB45 409 aa20.49■□□□□ 0.87
TRIM58-201ENST00000366481 EURLQ9NYK6 297 aa20.49■□□□□ 0.87
TRIM58-201ENST00000366481 CCND2P30279 289 aa20.49■□□□□ 0.87
TRIM58-201ENST00000366481 TMPRSS15P98073 1019 aa20.49■□□□□ 0.87
TRIM58-201ENST00000366481 CNTN2Q02246 1040 aa20.49■□□□□ 0.87
TRIM58-201ENST00000366481 TCEAL1Q15170 157 aa20.49■□□□□ 0.87
TRIM58-201ENST00000366481 SH2D4BQ5SQS7 431 aa20.49■□□□□ 0.87
TRIM58-201ENST00000366481 LIN9Q5TKA1 542 aa20.49■□□□□ 0.87
TRIM58-201ENST00000366481 LPCAT4Q643R3 524 aa20.49■□□□□ 0.87
TRIM58-201ENST00000366481 NIPA1Q7RTP0 329 aa20.49■□□□□ 0.87
TRIM58-201ENST00000366481 TMPRSS6Q8IU80 811 aa20.49■□□□□ 0.87
TRIM58-201ENST00000366481 ZNF398Q8TD17 642 aa20.49■□□□□ 0.87
TRIM58-201ENST00000366481 SHCBP1LQ9BZQ2 653 aa20.49■□□□□ 0.87
TRIM58-201ENST00000366481 MMADHCQ9H3L0 296 aaPredicted RBP20.49■□□□□ 0.87
TRIM58-201ENST00000366481 BRWD3Q6RI45 1802 aa20.49■□□□□ 0.87
TRIM58-201ENST00000366481 PIK3R2O00459 728 aa20.48■□□□□ 0.87
TRIM58-201ENST00000366481 STBD1O95210 358 aa20.48■□□□□ 0.87
TRIM58-201ENST00000366481 C4BPAP04003 597 aaKnown RBP20.48■□□□□ 0.87
TRIM58-201ENST00000366481 RARBP10826 455 aa20.48■□□□□ 0.87
TRIM58-201ENST00000366481 VAV1P15498 845 aa20.48■□□□□ 0.87
TRIM58-201ENST00000366481 NFX1Q12986 1120 aaKnown RBP20.48■□□□□ 0.87
TRIM58-201ENST00000366481 PICK1Q9NRD5 415 aa20.48■□□□□ 0.87
TRIM58-201ENST00000366481 DGAT1O75907 488 aa20.48■□□□□ 0.87
TRIM58-201ENST00000366481 DESP17661 470 aa20.48■□□□□ 0.87
TRIM58-201ENST00000366481 ACO1P21399 889 aaKnown RBP20.48■□□□□ 0.87
TRIM58-201ENST00000366481 OGDHQ02218 1023 aa20.48■□□□□ 0.87
TRIM58-201ENST00000366481 MYBPC3Q14896 1274 aa20.48■□□□□ 0.87
TRIM58-201ENST00000366481 RAPH1Q70E73 1250 aa20.48■□□□□ 0.87
TRIM58-201ENST00000366481 NAT14Q8WUY8 206 aa20.48■□□□□ 0.87
TRIM58-201ENST00000366481 ACAP3Q96P50 834 aa20.48■□□□□ 0.87
TRIM58-201ENST00000366481 CYP4F11Q9HBI6 524 aa20.48■□□□□ 0.87
TRIM58-201ENST00000366481 PGAP2Q9UHJ9 254 aa20.48■□□□□ 0.87
TRIM58-201ENST00000366481 ZNRF3Q9ULT6 936 aa20.48■□□□□ 0.87
TRIM58-201ENST00000366481 EXTL3O43909 919 aa20.48■□□□□ 0.87
TRIM58-201ENST00000366481 KLF1Q13351 362 aaPredicted RBP20.48■□□□□ 0.87
TRIM58-201ENST00000366481 ULK2Q8IYT8 1036 aa20.48■□□□□ 0.87
TRIM58-201ENST00000366481 ABRAQ8N0Z2 381 aa20.48■□□□□ 0.87
TRIM58-201ENST00000366481 GSTCDQ8NEC7 633 aa20.48■□□□□ 0.87
TRIM58-201ENST00000366481 PPP1R16BQ96T49 567 aa20.48■□□□□ 0.87
TRIM58-201ENST00000366481 CYLDQ9NQC7 956 aa20.48■□□□□ 0.87
TRIM58-201ENST00000366481 SLC4A7Q9Y6M7 1214 aa20.48■□□□□ 0.87
TRIM58-201ENST00000366481 TBC1D12O60347 775 aa20.47■□□□□ 0.87
TRIM58-201ENST00000366481 PSAPP07602 524 aa20.47■□□□□ 0.87
TRIM58-201ENST00000366481 HNRNPCP07910 306 aaKnown RBP eCLIP20.47■□□□□ 0.87
TRIM58-201ENST00000366481 SRGAP2CP0DJJ0 459 aa20.47■□□□□ 0.87
TRIM58-201ENST00000366481 IRX4P78413 519 aa20.47■□□□□ 0.87
TRIM58-201ENST00000366481 COG7P83436 770 aa20.47■□□□□ 0.87
TRIM58-201ENST00000366481 PPP1R14CQ8TAE6 165 aa20.47■□□□□ 0.87
TRIM58-201ENST00000366481 LRRN4Q8WUT4 740 aa20.47■□□□□ 0.87
TRIM58-201ENST00000366481 MTMR12Q9C0I1 747 aa20.47■□□□□ 0.87
TRIM58-201ENST00000366481 SLC24A2Q9UI40 661 aa20.47■□□□□ 0.87
TRIM58-201ENST00000366481 ATP6V1B1P15313 513 aa20.47■□□□□ 0.87
TRIM58-201ENST00000366481 GLRA2P23416 452 aa20.47■□□□□ 0.87
TRIM58-201ENST00000366481 NCOA4Q13772 614 aa20.47■□□□□ 0.87
TRIM58-201ENST00000366481 R3HDM1Q15032 1099 aaKnown RBP20.47■□□□□ 0.87
TRIM58-201ENST00000366481 TRIP10Q15642 601 aa20.47■□□□□ 0.87
TRIM58-201ENST00000366481 SDCCAG8Q86SQ7 713 aaPredicted RBP20.47■□□□□ 0.87
TRIM58-201ENST00000366481 SAMD3Q8N6K7 520 aa20.47■□□□□ 0.87
TRIM58-201ENST00000366481 ZNF606Q8WXB4 792 aa20.47■□□□□ 0.87
TRIM58-201ENST00000366481 PANX3Q96QZ0 392 aa20.47■□□□□ 0.87
TRIM58-201ENST00000366481 SLC13A1Q9BZW2 595 aa20.47■□□□□ 0.87
TRIM58-201ENST00000366481 CSDE1O75534 798 aaKnown RBP20.46■□□□□ 0.87
TRIM58-201ENST00000366481 GJB1P08034 283 aa20.46■□□□□ 0.87
TRIM58-201ENST00000366481 INHBAP08476 426 aa20.46■□□□□ 0.87
TRIM58-201ENST00000366481 TRMT5Q32P41 509 aaKnown RBP20.46■□□□□ 0.87
TRIM58-201ENST00000366481 MIPOL1Q8TD10 442 aa20.46■□□□□ 0.87
TRIM58-201ENST00000366481 LPAR1Q92633 364 aa20.46■□□□□ 0.87
TRIM58-201ENST00000366481 TEPSINQ96N21 525 aa20.46■□□□□ 0.87
TRIM58-201ENST00000366481 ARHGAP28Q9P2N2 729 aa20.46■□□□□ 0.87
TRIM58-201ENST00000366481 NXF1Q9UBU9 619 aaKnown RBP20.46■□□□□ 0.87
TRIM58-201ENST00000366481 YWHAGP61981 247 aaKnown RBP eCLIP20.46■□□□□ 0.87
TRIM58-201ENST00000366481 BTKQ06187 659 aa20.46■□□□□ 0.87
TRIM58-201ENST00000366481 FAM83AQ86UY5 434 aa20.46■□□□□ 0.87
TRIM58-201ENST00000366481 ATP11CQ8NB49 1132 aa20.46■□□□□ 0.87
TRIM58-201ENST00000366481 OR6Y1Q8NGX8 325 aa20.46■□□□□ 0.87
TRIM58-201ENST00000366481 WRNIP1Q96S55 665 aa20.46■□□□□ 0.87
TRIM58-201ENST00000366481 NTPCRQ9BSD7 190 aaKnown RBP20.46■□□□□ 0.87
TRIM58-201ENST00000366481 PHF24Q9UPV7 400 aa20.46■□□□□ 0.87
TRIM58-201ENST00000366481 RPS6KL1Q9Y6S9 549 aa20.46■□□□□ 0.87
TRIM58-201ENST00000366481 TMEM132BQ14DG7 1078 aa20.46■□□□□ 0.87
TRIM58-201ENST00000366481 EMC1Q8N766 993 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms