RNA–Protein interactions for RNA: ENST00000361530.10

CNKSR1-201, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNKSR1, Length 2,625 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-201ENST00000361530 CSDE1O75534 798 aaKnown RBP16.25■□□□□ 0.19
CNKSR1-201ENST00000361530 TRUB2O95900 331 aaKnown RBP16.25■□□□□ 0.19
CNKSR1-201ENST00000361530 ELK3P41970 407 aa16.25■□□□□ 0.19
CNKSR1-201ENST00000361530 KLHL38Q2WGJ6 581 aa16.25■□□□□ 0.19
CNKSR1-201ENST00000361530 ZC3H12AQ5D1E8 599 aaKnown RBP16.25■□□□□ 0.19
CNKSR1-201ENST00000361530 CAPRIN2Q6IMN6 1127 aaKnown RBP16.25■□□□□ 0.19
CNKSR1-201ENST00000361530 NCAPG2Q86XI2 1143 aa16.25■□□□□ 0.19
CNKSR1-201ENST00000361530 AGGF1Q8N302 714 aaeCLIP16.25■□□□□ 0.19
CNKSR1-201ENST00000361530 FAM13CQ8NE31 585 aa16.25■□□□□ 0.19
CNKSR1-201ENST00000361530 GPR20Q99678 358 aa16.25■□□□□ 0.19
CNKSR1-201ENST00000361530 PHACTR1Q9C0D0 580 aa16.25■□□□□ 0.19
CNKSR1-201ENST00000361530 CDT1Q9H211 546 aa16.25■□□□□ 0.19
CNKSR1-201ENST00000361530 FZD8Q9H461 694 aa16.25■□□□□ 0.19
CNKSR1-201ENST00000361530 SLC5A4Q9NY91 659 aa16.25■□□□□ 0.19
CNKSR1-201ENST00000361530 C2CD2LO14523 706 aa16.24■□□□□ 0.19
CNKSR1-201ENST00000361530 AVILO75366 819 aa16.24■□□□□ 0.19
CNKSR1-201ENST00000361530 MICAL2O94851 1124 aa16.24■□□□□ 0.19
CNKSR1-201ENST00000361530 EPHB2P29323 1055 aa16.24■□□□□ 0.19
CNKSR1-201ENST00000361530 SEPT7Q16181 437 aaKnown RBP16.24■□□□□ 0.19
CNKSR1-201ENST00000361530 TMEM132AQ24JP5 1023 aa16.24■□□□□ 0.19
CNKSR1-201ENST00000361530 ANKRD20A2Q5SQ80 823 aa16.24■□□□□ 0.19
CNKSR1-201ENST00000361530 ANKRD20A1Q5TYW2 823 aa16.24■□□□□ 0.19
CNKSR1-201ENST00000361530 ANKRD20A3Q5VUR7 823 aa16.24■□□□□ 0.19
CNKSR1-201ENST00000361530 TRNP1Q6NT89 227 aa16.24■□□□□ 0.19
CNKSR1-201ENST00000361530 LONP2Q86WA8 852 aa16.24■□□□□ 0.19
CNKSR1-201ENST00000361530 UBA3Q8TBC4 463 aa16.24■□□□□ 0.19
CNKSR1-201ENST00000361530 SERAC1Q96JX3 654 aa16.24■□□□□ 0.19
CNKSR1-201ENST00000361530 MAF1Q9H063 256 aa16.24■□□□□ 0.19
CNKSR1-201ENST00000361530 ASCC2Q9H1I8 757 aaPredicted RBP16.24■□□□□ 0.19
CNKSR1-201ENST00000361530 SSC5DA1L4H1 1573 aa16.24■□□□□ 0.19
CNKSR1-201ENST00000361530 GPR25O00155 361 aa16.24■□□□□ 0.19
CNKSR1-201ENST00000361530 PTPN11Q06124 597 aaPredicted RBP16.24■□□□□ 0.19
CNKSR1-201ENST00000361530 SLC45A4Q5BKX6 768 aa16.24■□□□□ 0.19
CNKSR1-201ENST00000361530 DPH6Q7L8W6 267 aa16.24■□□□□ 0.19
CNKSR1-201ENST00000361530 LRRC6Q86X45 466 aa16.24■□□□□ 0.19
CNKSR1-201ENST00000361530 INPP5DQ92835 1189 aa16.24■□□□□ 0.19
CNKSR1-201ENST00000361530 MCRS1Q96EZ8 462 aa16.24■□□□□ 0.19
CNKSR1-201ENST00000361530 TCRBV9S1A1TA0A576 114 aa16.23■□□□□ 0.19
CNKSR1-201ENST00000361530 MCF2LO15068 1137 aa16.23■□□□□ 0.19
CNKSR1-201ENST00000361530 ITGB3P05106 788 aa16.23■□□□□ 0.19
CNKSR1-201ENST00000361530 TGFB3P10600 412 aa16.23■□□□□ 0.19
CNKSR1-201ENST00000361530 CLCN3P51790 818 aa16.23■□□□□ 0.19
CNKSR1-201ENST00000361530 CTC1Q2NKJ3 1217 aa16.23■□□□□ 0.19
CNKSR1-201ENST00000361530 KBTBD12Q3ZCT8 623 aa16.23■□□□□ 0.19
CNKSR1-201ENST00000361530 SH3D19Q5HYK7 790 aa16.23■□□□□ 0.19
CNKSR1-201ENST00000361530 TRIM68Q6AZZ1 485 aa16.23■□□□□ 0.19
CNKSR1-201ENST00000361530 CYP4V2Q6ZWL3 525 aaPredicted RBP16.23■□□□□ 0.19
CNKSR1-201ENST00000361530 DEFB132Q7Z7B7 95 aa16.23■□□□□ 0.19
CNKSR1-201ENST00000361530 RIOX2Q8IUF8 465 aa16.23■□□□□ 0.19
CNKSR1-201ENST00000361530 PIWIL1Q96J94 861 aaKnown RBP16.23■□□□□ 0.19
CNKSR1-201ENST00000361530 FAM167AQ96KS9 214 aa16.23■□□□□ 0.19
CNKSR1-201ENST00000361530 MANSC1Q9H8J5 431 aa16.23■□□□□ 0.19
CNKSR1-201ENST00000361530 GGA3Q9NZ52 723 aa16.23■□□□□ 0.19
CNKSR1-201ENST00000361530 WDR35Q9P2L0 1181 aa16.23■□□□□ 0.19
CNKSR1-201ENST00000361530 ZFP69BQ9UJL9 534 aa16.23■□□□□ 0.19
CNKSR1-201ENST00000361530 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.23■□□□□ 0.19
CNKSR1-201ENST00000361530 LACTBL1A8MY62 500 aa16.23■□□□□ 0.19
CNKSR1-201ENST00000361530 KBTBD13C9JR72 458 aa16.23■□□□□ 0.19
CNKSR1-201ENST00000361530 PEX11AO75192 247 aa16.23■□□□□ 0.19
CNKSR1-201ENST00000361530 WFS1O76024 890 aa16.23■□□□□ 0.19
CNKSR1-201ENST00000361530 RNF8O76064 485 aa16.23■□□□□ 0.19
CNKSR1-201ENST00000361530 GPD2P43304 727 aa16.23■□□□□ 0.19
CNKSR1-201ENST00000361530 FAAP100Q0VG06 881 aa16.23■□□□□ 0.19
CNKSR1-201ENST00000361530 TAF11Q15544 211 aa16.23■□□□□ 0.19
CNKSR1-201ENST00000361530 DARS2Q6PI48 645 aaKnown RBP16.23■□□□□ 0.19
CNKSR1-201ENST00000361530 CLNKQ7Z7G1 428 aa16.23■□□□□ 0.19
CNKSR1-201ENST00000361530 APOBEC3FQ8IUX4 373 aaKnown RBP16.23■□□□□ 0.19
CNKSR1-201ENST00000361530 CYTH2Q99418 400 aa16.23■□□□□ 0.19
CNKSR1-201ENST00000361530 C2orf40Q9H1Z8 148 aa16.23■□□□□ 0.19
CNKSR1-201ENST00000361530 VPS11Q9H270 941 aa16.23■□□□□ 0.19
CNKSR1-201ENST00000361530 RPF1Q9H9Y2 349 aaKnown RBP16.23■□□□□ 0.19
CNKSR1-201ENST00000361530 LOC285556D6RIA3 1793 aa16.23■□□□□ 0.19
CNKSR1-201ENST00000361530 ANK1P16157 1881 aa16.23■□□□□ 0.19
CNKSR1-201ENST00000361530 M0QYV0 167 aa16.22■□□□□ 0.19
CNKSR1-201ENST00000361530 FZD9O00144 591 aa16.22■□□□□ 0.19
CNKSR1-201ENST00000361530 SOCS7O14512 581 aa16.22■□□□□ 0.19
CNKSR1-201ENST00000361530 TM9SF1O15321 606 aa16.22■□□□□ 0.19
CNKSR1-201ENST00000361530 CILPO75339 1184 aa16.22■□□□□ 0.19
CNKSR1-201ENST00000361530 MT-ND3P03897 115 aa16.22■□□□□ 0.19
CNKSR1-201ENST00000361530 PGK2P07205 417 aa16.22■□□□□ 0.19
CNKSR1-201ENST00000361530 C15orf59Q2T9L4 293 aaPredicted RBP16.22■□□□□ 0.19
CNKSR1-201ENST00000361530 FAM102AQ5T9C2 384 aaPredicted RBP16.22■□□□□ 0.19
CNKSR1-201ENST00000361530 FYB2Q5VWT5 728 aa16.22■□□□□ 0.19
CNKSR1-201ENST00000361530 SH2D5Q6ZV89 423 aa16.22■□□□□ 0.19
CNKSR1-201ENST00000361530 PRPF39Q86UA1 669 aaKnown RBP16.22■□□□□ 0.19
CNKSR1-201ENST00000361530 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.22■□□□□ 0.19
CNKSR1-201ENST00000361530 CXorf38Q8TB03 319 aa16.22■□□□□ 0.19
CNKSR1-201ENST00000361530 TMEM176AQ96HP8 235 aa16.22■□□□□ 0.19
CNKSR1-201ENST00000361530 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.22■□□□□ 0.19
CNKSR1-201ENST00000361530 PPP1R1BQ9UD71 204 aaPredicted RBP16.22■□□□□ 0.19
CNKSR1-201ENST00000361530 A0A0G2JND7 137 aa16.22■□□□□ 0.19
CNKSR1-201ENST00000361530 TTC36A6NLP5 189 aa16.22■□□□□ 0.19
CNKSR1-201ENST00000361530 GABRB2P47870 512 aa16.22■□□□□ 0.19
CNKSR1-201ENST00000361530 GCLCP48506 637 aaPredicted RBP16.22■□□□□ 0.19
CNKSR1-201ENST00000361530 CDH6P55285 790 aa16.22■□□□□ 0.19
CNKSR1-201ENST00000361530 MBTD1Q05BQ5 628 aa16.22■□□□□ 0.19
CNKSR1-201ENST00000361530 PTK7Q13308 1070 aa16.22■□□□□ 0.19
CNKSR1-201ENST00000361530 MAP1SQ66K74 1059 aaPredicted RBP16.22■□□□□ 0.19
CNKSR1-201ENST00000361530 JADE1Q6IE81 842 aa16.22■□□□□ 0.19
CNKSR1-201ENST00000361530 ARMC2Q8NEN0 867 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms