RNA–Protein interactions for RNA: ENST00000361490.8

HPS1-204, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS1, Length 3,678 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-204ENST00000361490 PLEKHA5Q9HAU0 1116 aa12.18□□□□□ -0.46
HPS1-204ENST00000361490 MIOSQ9NXC5 875 aa12.18□□□□□ -0.46
HPS1-204ENST00000361490 MYBPHLA2RUH7 354 aa12.18□□□□□ -0.46
HPS1-204ENST00000361490 CYBAP13498 195 aa12.18□□□□□ -0.46
HPS1-204ENST00000361490 PTPN1P18031 435 aaKnown RBP12.18□□□□□ -0.46
HPS1-204ENST00000361490 KRT15P19012 456 aa12.18□□□□□ -0.46
HPS1-204ENST00000361490 AXLP30530 894 aa12.18□□□□□ -0.46
HPS1-204ENST00000361490 PNPLA4P41247 253 aa12.18□□□□□ -0.46
HPS1-204ENST00000361490 CLDN10P78369 228 aa12.18□□□□□ -0.46
HPS1-204ENST00000361490 TSPY1Q01534 308 aa12.18□□□□□ -0.46
HPS1-204ENST00000361490 DHX34Q14147 1143 aaKnown RBP12.18□□□□□ -0.46
HPS1-204ENST00000361490 FAM187BQ17R55 369 aa12.18□□□□□ -0.46
HPS1-204ENST00000361490 PPP1R2P3Q6NXS1 205 aa12.18□□□□□ -0.46
HPS1-204ENST00000361490 TTC30AQ86WT1 665 aa12.18□□□□□ -0.46
HPS1-204ENST00000361490 MED4Q9NPJ6 270 aa12.18□□□□□ -0.46
HPS1-204ENST00000361490 PIH1D1Q9NWS0 290 aaKnown RBP12.18□□□□□ -0.46
HPS1-204ENST00000361490 NR2E3Q9Y5X4 410 aa12.18□□□□□ -0.46
HPS1-204ENST00000361490 IKBKGQ9Y6K9 419 aa12.18□□□□□ -0.46
HPS1-204ENST00000361490 KIF3CO14782 793 aa12.17□□□□□ -0.46
HPS1-204ENST00000361490 PEX5P50542 639 aa12.17□□□□□ -0.46
HPS1-204ENST00000361490 LONRF1Q17RB8 773 aa12.17□□□□□ -0.46
HPS1-204ENST00000361490 XYLT1Q86Y38 959 aa12.17□□□□□ -0.46
HPS1-204ENST00000361490 PALM2Q8IXS6 379 aa12.17□□□□□ -0.46
HPS1-204ENST00000361490 DEFB106AQ8N104 65 aa12.17□□□□□ -0.46
HPS1-204ENST00000361490 THEM5Q8N1Q8 247 aa12.17□□□□□ -0.46
HPS1-204ENST00000361490 PGBD4Q96DM1 585 aa12.17□□□□□ -0.46
HPS1-204ENST00000361490 VCPIP1Q96JH7 1222 aa12.17□□□□□ -0.46
HPS1-204ENST00000361490 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.17□□□□□ -0.46
HPS1-204ENST00000361490 PTCH2Q9Y6C5 1203 aa12.17□□□□□ -0.46
HPS1-204ENST00000361490 ZBBXA8MT70 800 aa12.17□□□□□ -0.46
HPS1-204ENST00000361490 KCNN4O15554 427 aa12.17□□□□□ -0.46
HPS1-204ENST00000361490 LRCH4O75427 683 aa12.17□□□□□ -0.46
HPS1-204ENST00000361490 GPD2P43304 727 aa12.17□□□□□ -0.46
HPS1-204ENST00000361490 BCAT1P54687 386 aa12.17□□□□□ -0.46
HPS1-204ENST00000361490 POU5F1BQ06416 359 aa12.17□□□□□ -0.46
HPS1-204ENST00000361490 TFDP3Q5H9I0 405 aa12.17□□□□□ -0.46
HPS1-204ENST00000361490 NFKBIZQ9BYH8 718 aa12.17□□□□□ -0.46
HPS1-204ENST00000361490 DDIT4Q9NX09 232 aa12.17□□□□□ -0.46
HPS1-204ENST00000361490 CCDC78A2IDD5 438 aa12.17□□□□□ -0.46
HPS1-204ENST00000361490 SIGLEC16A6NMB1 481 aa12.17□□□□□ -0.46
HPS1-204ENST00000361490 FKTNO75072 461 aa12.17□□□□□ -0.46
HPS1-204ENST00000361490 YWHAGP61981 247 aaKnown RBP eCLIP12.17□□□□□ -0.46
HPS1-204ENST00000361490 MTMR3Q13615 1198 aa12.17□□□□□ -0.46
HPS1-204ENST00000361490 OVOS1Q6IE37 1185 aa12.17□□□□□ -0.46
HPS1-204ENST00000361490 KDELC2Q7Z4H8 507 aa12.17□□□□□ -0.46
HPS1-204ENST00000361490 SPATA2LQ8IUW3 424 aaPredicted RBP12.17□□□□□ -0.46
HPS1-204ENST00000361490 ZBED8Q8IZ13 594 aa12.17□□□□□ -0.46
HPS1-204ENST00000361490 SMG8Q8ND04 991 aaKnown RBP12.17□□□□□ -0.46
HPS1-204ENST00000361490 DBF4BQ8NFT6 615 aa12.17□□□□□ -0.46
HPS1-204ENST00000361490 URGCPQ8TCY9 931 aa12.17□□□□□ -0.46
HPS1-204ENST00000361490 AGAP3Q96P47 875 aa12.17□□□□□ -0.46
HPS1-204ENST00000361490 SEPT5Q99719 369 aaPredicted RBP12.17□□□□□ -0.46
HPS1-204ENST00000361490 CCDC77Q9BR77 488 aa12.17□□□□□ -0.46
HPS1-204ENST00000361490 HERPUD2Q9BSE4 406 aa12.17□□□□□ -0.46
HPS1-204ENST00000361490 MAGEB5Q9BZ81 275 aa12.17□□□□□ -0.46
HPS1-204ENST00000361490 FAM155AB1AL88 458 aaPredicted RBP12.16□□□□□ -0.46
HPS1-204ENST00000361490 SCAMP3O14828 347 aaKnown RBP12.16□□□□□ -0.46
HPS1-204ENST00000361490 GJA9P57773 515 aa12.16□□□□□ -0.46
HPS1-204ENST00000361490 MAGOHP61326 146 aaKnown RBP12.16□□□□□ -0.46
HPS1-204ENST00000361490 TAP1Q03518 808 aa12.16□□□□□ -0.46
HPS1-204ENST00000361490 AP1B1Q10567 949 aa12.16□□□□□ -0.46
HPS1-204ENST00000361490 BST2Q10589 180 aaKnown RBP12.16□□□□□ -0.46
HPS1-204ENST00000361490 TERF2Q15554 542 aa12.16□□□□□ -0.46
HPS1-204ENST00000361490 CNPY3Q9BT09 278 aa12.16□□□□□ -0.46
HPS1-204ENST00000361490 ULBP1Q9BZM6 244 aa12.16□□□□□ -0.46
HPS1-204ENST00000361490 FAM187AA6NFU0 413 aa12.16□□□□□ -0.46
HPS1-204ENST00000361490 PSTPIP1O43586 416 aa12.16□□□□□ -0.46
HPS1-204ENST00000361490 IL1R2P27930 398 aa12.16□□□□□ -0.46
HPS1-204ENST00000361490 DEUP1Q05D60 604 aa12.16□□□□□ -0.46
HPS1-204ENST00000361490 MTFR1Q15390 333 aa12.16□□□□□ -0.46
HPS1-204ENST00000361490 TTC39CQ8N584 583 aa12.16□□□□□ -0.46
HPS1-204ENST00000361490 EXD1Q8NHP7 514 aa12.16□□□□□ -0.46
HPS1-204ENST00000361490 AENQ8WTP8 325 aaKnown RBP12.16□□□□□ -0.46
HPS1-204ENST00000361490 TSPYL1Q9H0U9 437 aa12.16□□□□□ -0.46
HPS1-204ENST00000361490 DNAJB2P25686 324 aa12.16□□□□□ -0.46
HPS1-204ENST00000361490 TM4SF4P48230 202 aa12.16□□□□□ -0.46
HPS1-204ENST00000361490 GUCY1A3Q02108 690 aa12.16□□□□□ -0.46
HPS1-204ENST00000361490 ZNF268Q14587 947 aaPredicted RBP12.16□□□□□ -0.46
HPS1-204ENST00000361490 MGAT5BQ3V5L5 792 aa12.16□□□□□ -0.46
HPS1-204ENST00000361490 RNF139Q8WU17 664 aa12.16□□□□□ -0.46
HPS1-204ENST00000361490 FAF2Q96CS3 445 aa12.16□□□□□ -0.46
HPS1-204ENST00000361490 DDX27Q96GQ7 796 aaKnown RBP12.16□□□□□ -0.46
HPS1-204ENST00000361490 DCLK3Q9C098 648 aa12.16□□□□□ -0.46
HPS1-204ENST00000361490 TMPRSS4Q9NRS4 437 aa12.16□□□□□ -0.46
HPS1-204ENST00000361490 PCDHB7Q9Y5E2 793 aa12.16□□□□□ -0.46
HPS1-204ENST00000361490 MBLAC1A4D2B0 266 aaPredicted RBP12.15□□□□□ -0.46
HPS1-204ENST00000361490 APRTP07741 180 aa12.15□□□□□ -0.46
HPS1-204ENST00000361490 PDIA2Q13087 525 aaKnown RBP12.15□□□□□ -0.46
HPS1-204ENST00000361490 MIB1Q86YT6 1006 aa12.15□□□□□ -0.46
HPS1-204ENST00000361490 ZDHHC14Q8IZN3 488 aa12.15□□□□□ -0.46
HPS1-204ENST00000361490 SNF8Q96H20 258 aa12.15□□□□□ -0.46
HPS1-204ENST00000361490 DDX23Q9BUQ8 820 aaKnown RBP12.15□□□□□ -0.46
HPS1-204ENST00000361490 RAB6BQ9NRW1 208 aa12.15□□□□□ -0.46
HPS1-204ENST00000361490 DDX56Q9NY93 547 aaKnown RBP12.15□□□□□ -0.46
HPS1-204ENST00000361490 CITO14578 2027 aa12.15□□□□□ -0.46
HPS1-204ENST00000361490 MEFVO15553 781 aaPredicted RBP12.15□□□□□ -0.46
HPS1-204ENST00000361490 PAPSS1O43252 624 aaPredicted RBP12.15□□□□□ -0.46
HPS1-204ENST00000361490 BANF1O75531 89 aa12.15□□□□□ -0.46
HPS1-204ENST00000361490 TFE3P19532 575 aaPredicted RBP12.15□□□□□ -0.46
HPS1-204ENST00000361490 PCSK1P29120 753 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms