RNA–Protein interactions for RNA: ENST00000361246.6

CDC42BPB-201, Transcript of CDC42 binding protein kinase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPB, Length 6,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-201ENST00000361246 ADAM2Q99965 735 aa21.02■□□□□ 0.96
CDC42BPB-201ENST00000361246 RSAD1Q9HA92 442 aa21.02■□□□□ 0.96
CDC42BPB-201ENST00000361246 RHOBTB3O94955 611 aa21.02■□□□□ 0.96
CDC42BPB-201ENST00000361246 RFX7Q2KHR2 1363 aa21.02■□□□□ 0.96
CDC42BPB-201ENST00000361246 AKR1A1P14550 325 aa21.02■□□□□ 0.96
CDC42BPB-201ENST00000361246 CYP11B2P19099 503 aa21.02■□□□□ 0.96
CDC42BPB-201ENST00000361246 DSG3P32926 999 aa21.02■□□□□ 0.96
CDC42BPB-201ENST00000361246 PCNX4Q63HM2 1172 aa21.02■□□□□ 0.96
CDC42BPB-201ENST00000361246 ACAD10Q6JQN1 1059 aa21.02■□□□□ 0.96
CDC42BPB-201ENST00000361246 ZNF438Q7Z4V0 828 aa21.02■□□□□ 0.96
CDC42BPB-201ENST00000361246 PAK5Q9P286 719 aa21.02■□□□□ 0.96
CDC42BPB-201ENST00000361246 HSPA9P38646 679 aaKnown RBP21.02■□□□□ 0.95
CDC42BPB-201ENST00000361246 FXR1P51114 621 aaKnown RBP eCLIP21.02■□□□□ 0.95
CDC42BPB-201ENST00000361246 MARK2Q7KZI7 788 aaKnown RBP21.02■□□□□ 0.95
CDC42BPB-201ENST00000361246 GPC2Q8N158 579 aa21.02■□□□□ 0.95
CDC42BPB-201ENST00000361246 MTFMTQ96DP5 389 aaKnown RBP21.02■□□□□ 0.95
CDC42BPB-201ENST00000361246 USE1Q9NZ43 259 aa21.02■□□□□ 0.95
CDC42BPB-201ENST00000361246 PTPRMP28827 1452 aa21.01■□□□□ 0.95
CDC42BPB-201ENST00000361246 GMNCA6NCL1 334 aa21.01■□□□□ 0.95
CDC42BPB-201ENST00000361246 PDZK1P1A8MUH7 402 aa21.01■□□□□ 0.95
CDC42BPB-201ENST00000361246 B3GALNT2Q8NCR0 500 aa21.01■□□□□ 0.95
CDC42BPB-201ENST00000361246 MYOCQ99972 504 aa21.01■□□□□ 0.95
CDC42BPB-201ENST00000361246 ETNK1Q9HBU6 452 aa21.01■□□□□ 0.95
CDC42BPB-201ENST00000361246 CHI3L2Q15782 390 aa21.01■□□□□ 0.95
CDC42BPB-201ENST00000361246 UVRAGQ9P2Y5 699 aa21.01■□□□□ 0.95
CDC42BPB-201ENST00000361246 KATNA1O75449 491 aa21.01■□□□□ 0.95
CDC42BPB-201ENST00000361246 IL1R1P14778 569 aa21.01■□□□□ 0.95
CDC42BPB-201ENST00000361246 CDH8P55286 799 aa21.01■□□□□ 0.95
CDC42BPB-201ENST00000361246 GRB10Q13322 594 aa21.01■□□□□ 0.95
CDC42BPB-201ENST00000361246 PTK6Q13882 451 aa21.01■□□□□ 0.95
CDC42BPB-201ENST00000361246 ANGPT1Q15389 498 aa21.01■□□□□ 0.95
CDC42BPB-201ENST00000361246 KIAA1324Q6UXG2 1013 aaKnown RBP21.01■□□□□ 0.95
CDC42BPB-201ENST00000361246 TMC2Q8TDI7 906 aa21.01■□□□□ 0.95
CDC42BPB-201ENST00000361246 SYTL5Q8TDW5 730 aaPredicted RBP21.01■□□□□ 0.95
CDC42BPB-201ENST00000361246 PSMC6P62333 389 aa21.01■□□□□ 0.95
CDC42BPB-201ENST00000361246 CORO1BQ9BR76 489 aa21.01■□□□□ 0.95
CDC42BPB-201ENST00000361246 BDNFP23560 247 aa21.01■□□□□ 0.95
CDC42BPB-201ENST00000361246 FXR2P51116 673 aaKnown RBP eCLIP21.01■□□□□ 0.957e-7■■■■□ 22.9
CDC42BPB-201ENST00000361246 KDM1AO60341 852 aa21■□□□□ 0.95
CDC42BPB-201ENST00000361246 GRIN3AQ8TCU5 1115 aa21■□□□□ 0.95
CDC42BPB-201ENST00000361246 RHBGQ9H310 441 aa21■□□□□ 0.95
CDC42BPB-201ENST00000361246 UTP6Q9NYH9 597 aaKnown RBP21■□□□□ 0.95
CDC42BPB-201ENST00000361246 PADI4Q9UM07 663 aa21■□□□□ 0.95
CDC42BPB-201ENST00000361246 TPH1P17752 444 aa21■□□□□ 0.95
CDC42BPB-201ENST00000361246 LVRNQ6Q4G3 990 aa21■□□□□ 0.95
CDC42BPB-201ENST00000361246 VPS50Q96JG6 964 aa21■□□□□ 0.95
CDC42BPB-201ENST00000361246 TBC1D3BA6NDS4 549 aa21■□□□□ 0.95
CDC42BPB-201ENST00000361246 F8W810 466 aa21■□□□□ 0.95
CDC42BPB-201ENST00000361246 KLHDC7AQ5VTJ3 777 aa21■□□□□ 0.95
CDC42BPB-201ENST00000361246 LPPQ93052 612 aa21■□□□□ 0.95
CDC42BPB-201ENST00000361246 MRPL1Q9BYD6 325 aaKnown RBP21■□□□□ 0.95
CDC42BPB-201ENST00000361246 IKBKEQ14164 716 aa21■□□□□ 0.95
CDC42BPB-201ENST00000361246 DIS3LQ8TF46 1054 aaKnown RBP21■□□□□ 0.95
CDC42BPB-201ENST00000361246 SPRP35270 261 aaPredicted RBP21■□□□□ 0.95
CDC42BPB-201ENST00000361246 CPA2P48052 419 aa21■□□□□ 0.95
CDC42BPB-201ENST00000361246 EML3Q32P44 896 aa21■□□□□ 0.95
CDC42BPB-201ENST00000361246 FAM124AQ86V42 546 aa21■□□□□ 0.95
CDC42BPB-201ENST00000361246 NT5DC4Q86YG4 428 aa21■□□□□ 0.95
CDC42BPB-201ENST00000361246 ZDHHC6Q9H6R6 413 aa21■□□□□ 0.95
CDC42BPB-201ENST00000361246 PPRC1Q5VV67 1664 aaKnown RBP20.99■□□□□ 0.95
CDC42BPB-201ENST00000361246 CHN1P15882 459 aa20.99■□□□□ 0.95
CDC42BPB-201ENST00000361246 TMX2Q9Y320 296 aa20.99■□□□□ 0.95
CDC42BPB-201ENST00000361246 MAP2P11137 1827 aaKnown RBP20.99■□□□□ 0.95
CDC42BPB-201ENST00000361246 FOXN3O00409 490 aaPredicted RBP20.99■□□□□ 0.95
CDC42BPB-201ENST00000361246 USP17L7P0C7H9 530 aa20.99■□□□□ 0.95
CDC42BPB-201ENST00000361246 SLC2A3P11169 496 aa20.99■□□□□ 0.95
CDC42BPB-201ENST00000361246 OR1E1P30953 314 aa20.99■□□□□ 0.95
CDC42BPB-201ENST00000361246 MARSP56192 900 aaKnown RBP20.99■□□□□ 0.95
CDC42BPB-201ENST00000361246 ZNF555Q8NEP9 628 aa20.99■□□□□ 0.95
CDC42BPB-201ENST00000361246 NFKBIL1Q9UBC1 381 aaPredicted RBP20.99■□□□□ 0.95
CDC42BPB-201ENST00000361246 AP3B1O00203 1094 aa20.99■□□□□ 0.95
CDC42BPB-201ENST00000361246 MLH1P40692 756 aa20.99■□□□□ 0.95
CDC42BPB-201ENST00000361246 TRPC1P48995 793 aa20.99■□□□□ 0.95
CDC42BPB-201ENST00000361246 NAPEPLDQ6IQ20 393 aa20.99■□□□□ 0.95
CDC42BPB-201ENST00000361246 CALML6Q8TD86 181 aa20.99■□□□□ 0.95
CDC42BPB-201ENST00000361246 MRPL40Q9NQ50 206 aaKnown RBP20.99■□□□□ 0.95
CDC42BPB-201ENST00000361246 KPNA3O00505 521 aaPredicted RBP20.99■□□□□ 0.95
CDC42BPB-201ENST00000361246 PGM1P36871 562 aa20.99■□□□□ 0.95
CDC42BPB-201ENST00000361246 PMS1P54277 932 aaKnown RBP20.99■□□□□ 0.95
CDC42BPB-201ENST00000361246 ABCE1P61221 599 aaKnown RBP20.99■□□□□ 0.95
CDC42BPB-201ENST00000361246 ARMC2Q8NEN0 867 aa20.99■□□□□ 0.95
CDC42BPB-201ENST00000361246 GPR152Q8TDT2 470 aa20.99■□□□□ 0.95
CDC42BPB-201ENST00000361246 PPP1R14AQ96A00 147 aa20.99■□□□□ 0.95
CDC42BPB-201ENST00000361246 SUPT7LO94864 414 aa20.99■□□□□ 0.95
CDC42BPB-201ENST00000361246 CTDNEP1O95476 244 aa20.99■□□□□ 0.95
CDC42BPB-201ENST00000361246 MSH3P20585 1137 aa20.99■□□□□ 0.95
CDC42BPB-201ENST00000361246 LHX1P48742 406 aa20.99■□□□□ 0.95
CDC42BPB-201ENST00000361246 PRIM2P49643 509 aa20.99■□□□□ 0.95
CDC42BPB-201ENST00000361246 PCDHB5Q9Y5E4 795 aa20.99■□□□□ 0.95
CDC42BPB-201ENST00000361246 ALG6Q9Y672 507 aa20.99■□□□□ 0.95
CDC42BPB-201ENST00000361246 GNG14A0A1W2PPG7 69 aa20.99■□□□□ 0.95
CDC42BPB-201ENST00000361246 CAND2O75155 1236 aa20.99■□□□□ 0.95
CDC42BPB-201ENST00000361246 HALP42357 657 aa20.99■□□□□ 0.95
CDC42BPB-201ENST00000361246 MAGEA4P43358 317 aa20.99■□□□□ 0.95
CDC42BPB-201ENST00000361246 E2F4Q16254 413 aa20.99■□□□□ 0.95
CDC42BPB-201ENST00000361246 LGI2Q8N0V4 545 aa20.99■□□□□ 0.95
CDC42BPB-201ENST00000361246 CAMKK1Q8N5S9 505 aa20.99■□□□□ 0.95
CDC42BPB-201ENST00000361246 CGRRF1Q99675 332 aa20.99■□□□□ 0.95
CDC42BPB-201ENST00000361246 DYRK1BQ9Y463 629 aa20.99■□□□□ 0.95
CDC42BPB-201ENST00000361246 A0A1W2PQC6 194 aa20.98■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms