RNA–Protein interactions for RNA: ENST00000359031.8

GABPB1-202, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 5 BASIC

Gene GABPB1, Length 1,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-202ENST00000359031 APOL6Q9BWW8 343 aa15.61■□□□□ 0.09
GABPB1-202ENST00000359031 PHACTR1Q9C0D0 580 aa15.61■□□□□ 0.09
GABPB1-202ENST00000359031 FAM107BQ9H098 131 aa15.61■□□□□ 0.09
GABPB1-202ENST00000359031 ADAM7Q9H2U9 754 aa15.61■□□□□ 0.09
GABPB1-202ENST00000359031 CYLDQ9NQC7 956 aa15.61■□□□□ 0.09
GABPB1-202ENST00000359031 GDAP2Q9NXN4 497 aa15.61■□□□□ 0.09
GABPB1-202ENST00000359031 PCSK1NQ9UHG2 260 aa15.61■□□□□ 0.09
GABPB1-202ENST00000359031 ATXN2Q99700 1313 aaKnown RBP15.6■□□□□ 0.09
GABPB1-202ENST00000359031 SMIM28A0A1B0GU29 152 aa15.6■□□□□ 0.09
GABPB1-202ENST00000359031 APOC4-APOC2K7ER74 178 aa15.6■□□□□ 0.09
GABPB1-202ENST00000359031 TNPO2O14787 897 aaKnown RBP15.6■□□□□ 0.09
GABPB1-202ENST00000359031 TRAPPC3O43617 180 aa15.6■□□□□ 0.09
GABPB1-202ENST00000359031 APOC2P02655 101 aa15.6■□□□□ 0.09
GABPB1-202ENST00000359031 PDGFRAP16234 1089 aa15.6■□□□□ 0.09
GABPB1-202ENST00000359031 SCNN1AP37088 669 aa15.6■□□□□ 0.09
GABPB1-202ENST00000359031 PURAQ00577 322 aaKnown RBP15.6■□□□□ 0.09
GABPB1-202ENST00000359031 BEX3Q00994 111 aa15.6■□□□□ 0.09
GABPB1-202ENST00000359031 SLC6A3Q01959 620 aa15.6■□□□□ 0.09
GABPB1-202ENST00000359031 SOWAHAQ2M3V2 549 aa15.6■□□□□ 0.09
GABPB1-202ENST00000359031 SV2CQ496J9 727 aa15.6■□□□□ 0.09
GABPB1-202ENST00000359031 RNASEH2BQ5TBB1 312 aaKnown RBP15.6■□□□□ 0.09
GABPB1-202ENST00000359031 TRNP1Q6NT89 227 aa15.6■□□□□ 0.09
GABPB1-202ENST00000359031 TAF2Q6P1X5 1199 aa15.6■□□□□ 0.09
GABPB1-202ENST00000359031 B4GALNT4Q76KP1 1039 aa15.6■□□□□ 0.09
GABPB1-202ENST00000359031 VSIG1Q86XK7 387 aa15.6■□□□□ 0.09
GABPB1-202ENST00000359031 C7orf31Q8N865 590 aa15.6■□□□□ 0.09
GABPB1-202ENST00000359031 GLIS1Q8NBF1 620 aa15.6■□□□□ 0.09
GABPB1-202ENST00000359031 OR6B3Q8NGW1 331 aa15.6■□□□□ 0.09
GABPB1-202ENST00000359031 PPP1R13LQ8WUF5 828 aa15.6■□□□□ 0.09
GABPB1-202ENST00000359031 SLC35F5Q8WV83 523 aa15.6■□□□□ 0.09
GABPB1-202ENST00000359031 TEKT4Q8WW24 435 aa15.6■□□□□ 0.09
GABPB1-202ENST00000359031 HSPH1Q92598 858 aa15.6■□□□□ 0.09
GABPB1-202ENST00000359031 ARMC5Q96C12 935 aa15.6■□□□□ 0.09
GABPB1-202ENST00000359031 PEBP4Q96S96 227 aa15.6■□□□□ 0.09
GABPB1-202ENST00000359031 ZFYVE28Q9HCC9 887 aa15.6■□□□□ 0.09
GABPB1-202ENST00000359031 FAM49BQ9NUQ9 324 aa15.6■□□□□ 0.09
GABPB1-202ENST00000359031 GJD2Q9UKL4 321 aa15.6■□□□□ 0.09
GABPB1-202ENST00000359031 NME7Q9Y5B8 376 aa15.6■□□□□ 0.09
GABPB1-202ENST00000359031 GMNCA6NCL1 334 aa15.59■□□□□ 0.09
GABPB1-202ENST00000359031 A8MXQ7 604 aa15.59■□□□□ 0.09
GABPB1-202ENST00000359031 E7EVH7 732 aa15.59■□□□□ 0.09
GABPB1-202ENST00000359031 PRPSAP2O60256 369 aa15.59■□□□□ 0.09
GABPB1-202ENST00000359031 ECM2O94769 699 aaPredicted RBP15.59■□□□□ 0.09
GABPB1-202ENST00000359031 ENDOD1O94919 500 aa15.59■□□□□ 0.09
GABPB1-202ENST00000359031 AKAP5P24588 427 aa15.59■□□□□ 0.09
GABPB1-202ENST00000359031 SLCO1A2P46721 670 aa15.59■□□□□ 0.09
GABPB1-202ENST00000359031 RGS7P49802 495 aa15.59■□□□□ 0.09
GABPB1-202ENST00000359031 TAF6P49848 677 aa15.59■□□□□ 0.09
GABPB1-202ENST00000359031 BCAT1P54687 386 aa15.59■□□□□ 0.09
GABPB1-202ENST00000359031 DYNLT1P63172 113 aa15.59■□□□□ 0.09
GABPB1-202ENST00000359031 IRX5P78411 483 aaPredicted RBP15.59■□□□□ 0.09
GABPB1-202ENST00000359031 PLCB3Q01970 1234 aa15.59■□□□□ 0.09
GABPB1-202ENST00000359031 BST2Q10589 180 aaKnown RBP15.59■□□□□ 0.09
GABPB1-202ENST00000359031 TFDP2Q14188 446 aa15.59■□□□□ 0.09
GABPB1-202ENST00000359031 STAT4Q14765 748 aa15.59■□□□□ 0.09
GABPB1-202ENST00000359031 KYNUQ16719 465 aa15.59■□□□□ 0.09
GABPB1-202ENST00000359031 FAM47CQ5HY64 1035 aa15.59■□□□□ 0.09
GABPB1-202ENST00000359031 PMF1Q6P1K2 205 aa15.59■□□□□ 0.09
GABPB1-202ENST00000359031 CYP4V2Q6ZWL3 525 aaPredicted RBP15.59■□□□□ 0.09
GABPB1-202ENST00000359031 LIMS2Q7Z4I7 341 aa15.59■□□□□ 0.09
GABPB1-202ENST00000359031 PRUNE1Q86TP1 453 aa15.59■□□□□ 0.09
GABPB1-202ENST00000359031 ZNF473Q8WTR7 871 aaKnown RBP15.59■□□□□ 0.09
GABPB1-202ENST00000359031 RBM15Q96T37 977 aaKnown RBP eCLIP15.59■□□□□ 0.097e-13■■■■■ 35
GABPB1-202ENST00000359031 SELENOSQ9BQE4 189 aa15.59■□□□□ 0.09
GABPB1-202ENST00000359031 TMEM121Q9BTD3 319 aa15.59■□□□□ 0.09
GABPB1-202ENST00000359031 DNAJC17Q9NVM6 304 aaKnown RBP15.59■□□□□ 0.09
GABPB1-202ENST00000359031 RRP15Q9Y3B9 282 aaKnown RBP15.59■□□□□ 0.09
GABPB1-202ENST00000359031 KPNA7A9QM74 516 aa15.58■□□□□ 0.09
GABPB1-202ENST00000359031 SMAPO00193 183 aa15.58■□□□□ 0.09
GABPB1-202ENST00000359031 MCF2LO15068 1137 aa15.58■□□□□ 0.09
GABPB1-202ENST00000359031 DUSP11O75319 330 aaKnown RBP15.58■□□□□ 0.09
GABPB1-202ENST00000359031 CD48P09326 243 aa15.58■□□□□ 0.09
GABPB1-202ENST00000359031 ZSCAN5DPP0CG00 497 aa15.58■□□□□ 0.09
GABPB1-202ENST00000359031 SDC4P31431 198 aa15.58■□□□□ 0.09
GABPB1-202ENST00000359031 MAGEA4P43358 317 aa15.58■□□□□ 0.09
GABPB1-202ENST00000359031 IFI35P80217 286 aaPredicted RBP15.58■□□□□ 0.09
GABPB1-202ENST00000359031 ZNF200P98182 395 aaPredicted RBP15.58■□□□□ 0.09
GABPB1-202ENST00000359031 ARHGEF6Q15052 776 aa15.58■□□□□ 0.09
GABPB1-202ENST00000359031 PDK2Q15119 407 aa15.58■□□□□ 0.09
GABPB1-202ENST00000359031 LONRF1Q17RB8 773 aa15.58■□□□□ 0.09
GABPB1-202ENST00000359031 CRYBG2Q8N1P7 616 aa15.58■□□□□ 0.09
GABPB1-202ENST00000359031 RIBC1Q8N443 379 aaPredicted RBP15.58■□□□□ 0.09
GABPB1-202ENST00000359031 KBTBD7Q8WVZ9 684 aa15.58■□□□□ 0.09
GABPB1-202ENST00000359031 PIWIL1Q96J94 861 aaKnown RBP15.58■□□□□ 0.09
GABPB1-202ENST00000359031 CFAP57Q96MR6 1250 aa15.58■□□□□ 0.09
GABPB1-202ENST00000359031 CCT8L2Q96SF2 557 aa15.58■□□□□ 0.09
GABPB1-202ENST00000359031 TBCBQ99426 244 aa15.58■□□□□ 0.09
GABPB1-202ENST00000359031 CCDC77Q9BR77 488 aa15.58■□□□□ 0.09
GABPB1-202ENST00000359031 SNX25Q9H3E2 840 aa15.58■□□□□ 0.09
GABPB1-202ENST00000359031 RABEP2Q9H5N1 569 aa15.58■□□□□ 0.09
GABPB1-202ENST00000359031 PPANQ9NQ55 473 aaKnown RBP15.58■□□□□ 0.09
GABPB1-202ENST00000359031 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.58■□□□□ 0.09
GABPB1-202ENST00000359031 LGALS13Q9UHV8 139 aa15.58■□□□□ 0.09
GABPB1-202ENST00000359031 IPPQ9Y573 584 aa15.58■□□□□ 0.09
GABPB1-202ENST00000359031 SCN10AQ9Y5Y9 1956 aa15.58■□□□□ 0.08
GABPB1-202ENST00000359031 A0A087WUV0 522 aaPredicted RBP15.57■□□□□ 0.08
GABPB1-202ENST00000359031 ETS1P14921 441 aa15.57■□□□□ 0.08
GABPB1-202ENST00000359031 PECAM1P16284 738 aaPredicted RBP15.57■□□□□ 0.08
GABPB1-202ENST00000359031 RPL34P49207 117 aaKnown RBP15.57■□□□□ 0.08
GABPB1-202ENST00000359031 CDH6P55285 790 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms