RNA–Protein interactions for RNA: ENST00000358278.7

TPM1-206, Transcript of tropomyosin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TPM1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-206ENST00000358278 SIX6OS1Q8N1H7 587 aa16.08■□□□□ 0.16
TPM1-206ENST00000358278 MSANTD4Q8NCY6 345 aa16.08■□□□□ 0.16
TPM1-206ENST00000358278 CPA5Q8WXQ8 436 aa16.08■□□□□ 0.16
TPM1-206ENST00000358278 PSMG2Q969U7 264 aa16.08■□□□□ 0.16
TPM1-206ENST00000358278 CHP1Q99653 195 aa16.08■□□□□ 0.16
TPM1-206ENST00000358278 APOL5Q9BWW9 433 aa16.08■□□□□ 0.16
TPM1-206ENST00000358278 PRKD2Q9BZL6 878 aa16.08■□□□□ 0.16
TPM1-206ENST00000358278 UBXN6Q9BZV1 441 aa16.08■□□□□ 0.16
TPM1-206ENST00000358278 SYNCQ9H7C4 482 aa16.08■□□□□ 0.16
TPM1-206ENST00000358278 PIDD1Q9HB75 910 aa16.08■□□□□ 0.16
TPM1-206ENST00000358278 LRRC4Q9HBW1 653 aa16.08■□□□□ 0.16
TPM1-206ENST00000358278 EHD2Q9NZN4 543 aa16.08■□□□□ 0.16
TPM1-206ENST00000358278 ADAMTS1Q9UHI8 967 aa16.08■□□□□ 0.16
TPM1-206ENST00000358278 CYTH4Q9UIA0 394 aa16.08■□□□□ 0.16
TPM1-206ENST00000358278 SSU72P8A0A1W2PR75 194 aa16.07■□□□□ 0.16
TPM1-206ENST00000358278 HHLA1C9JL84 531 aa16.07■□□□□ 0.16
TPM1-206ENST00000358278 PIK3R2O00459 728 aa16.07■□□□□ 0.16
TPM1-206ENST00000358278 RTN3O95197 1032 aaPredicted RBP16.07■□□□□ 0.16
TPM1-206ENST00000358278 CYP1A1P04798 512 aaPredicted RBP16.07■□□□□ 0.16
TPM1-206ENST00000358278 PTMAP06454 111 aaKnown RBP16.07■□□□□ 0.16
TPM1-206ENST00000358278 NSFP46459 744 aaKnown RBP16.07■□□□□ 0.16
TPM1-206ENST00000358278 ADIGQ0VDE8 80 aa16.07■□□□□ 0.16
TPM1-206ENST00000358278 MTMR3Q13615 1198 aa16.07■□□□□ 0.16
TPM1-206ENST00000358278 COL19A1Q14993 1142 aa16.07■□□□□ 0.16
TPM1-206ENST00000358278 CLEC16AQ2KHT3 1053 aa16.07■□□□□ 0.16
TPM1-206ENST00000358278 CYP26C1Q6V0L0 522 aa16.07■□□□□ 0.16
TPM1-206ENST00000358278 WDTC1Q8N5D0 677 aa16.07■□□□□ 0.16
TPM1-206ENST00000358278 CMASQ8NFW8 434 aaPredicted RBP16.07■□□□□ 0.16
TPM1-206ENST00000358278 SCAMP5Q8TAC9 235 aa16.07■□□□□ 0.16
TPM1-206ENST00000358278 IPO4Q8TEX9 1081 aaKnown RBP16.07■□□□□ 0.16
TPM1-206ENST00000358278 SMG7Q92540 1137 aaKnown RBP16.07■□□□□ 0.16
TPM1-206ENST00000358278 PPP1R13BQ96KQ4 1090 aa16.07■□□□□ 0.16
TPM1-206ENST00000358278 HSFY1Q96LI6 401 aa16.07■□□□□ 0.16
TPM1-206ENST00000358278 CCDC42Q96M95 316 aa16.07■□□□□ 0.16
TPM1-206ENST00000358278 PCDHB18PQ96TA0 734 aa16.07■□□□□ 0.16
TPM1-206ENST00000358278 NHEJ1Q9H9Q4 299 aaPredicted RBP16.07■□□□□ 0.16
TPM1-206ENST00000358278 DENND4AQ7Z401 1863 aa16.07■□□□□ 0.16
TPM1-206ENST00000358278 TNFRSF10BO14763 440 aa16.06■□□□□ 0.16
TPM1-206ENST00000358278 AKR1B10O60218 316 aa16.06■□□□□ 0.16
TPM1-206ENST00000358278 LCP1P13796 627 aa16.06■□□□□ 0.16
TPM1-206ENST00000358278 ACADSBP45954 432 aa16.06■□□□□ 0.16
TPM1-206ENST00000358278 TKTL1P51854 596 aa16.06■□□□□ 0.16
TPM1-206ENST00000358278 SNX16P57768 344 aa16.06■□□□□ 0.16
TPM1-206ENST00000358278 DLX2Q07687 328 aaPredicted RBP16.06■□□□□ 0.16
TPM1-206ENST00000358278 DNAJB7Q7Z6W7 309 aaPredicted RBP16.06■□□□□ 0.16
TPM1-206ENST00000358278 STK32AQ8WU08 396 aa16.06■□□□□ 0.16
TPM1-206ENST00000358278 KCTD13Q8WZ19 329 aa16.06■□□□□ 0.16
TPM1-206ENST00000358278 PDLIM2Q96JY6 352 aa16.06■□□□□ 0.16
TPM1-206ENST00000358278 CPXM1Q96SM3 734 aa16.06■□□□□ 0.16
TPM1-206ENST00000358278 BAG1Q99933 345 aaPredicted RBP16.06■□□□□ 0.16
TPM1-206ENST00000358278 CORO1BQ9BR76 489 aa16.06■□□□□ 0.16
TPM1-206ENST00000358278 FBXO44Q9H4M3 255 aa16.06■□□□□ 0.16
TPM1-206ENST00000358278 CYLDQ9NQC7 956 aa16.06■□□□□ 0.16
TPM1-206ENST00000358278 ASAH2Q9NR71 780 aa16.06■□□□□ 0.16
TPM1-206ENST00000358278 CLEC1BQ9P126 229 aa16.06■□□□□ 0.16
TPM1-206ENST00000358278 UXTQ9UBK9 157 aaPredicted RBP16.06■□□□□ 0.16
TPM1-206ENST00000358278 TMCO5BA8MYB1 307 aa16.05■□□□□ 0.16
TPM1-206ENST00000358278 E5RJQ4 531 aa16.05■□□□□ 0.16
TPM1-206ENST00000358278 DDX3XO00571 662 aaKnown RBP eCLIP16.05■□□□□ 0.162e-8■■■■□ 19.9
TPM1-206ENST00000358278 POU2F2P09086 479 aa16.05■□□□□ 0.16
TPM1-206ENST00000358278 UNGP13051 313 aaPredicted RBP16.05■□□□□ 0.16
TPM1-206ENST00000358278 KIF11P52732 1056 aa16.05■□□□□ 0.16
TPM1-206ENST00000358278 CENPCQ03188 943 aa16.05■□□□□ 0.16
TPM1-206ENST00000358278 RAB41Q5JT25 222 aa16.05■□□□□ 0.16
TPM1-206ENST00000358278 CES5AQ6NT32 575 aa16.05■□□□□ 0.16
TPM1-206ENST00000358278 SYCE2Q6PIF2 218 aa16.05■□□□□ 0.16
TPM1-206ENST00000358278 ERICH1Q86X53 443 aa16.05■□□□□ 0.16
TPM1-206ENST00000358278 SLC30A5Q8TAD4 765 aa16.05■□□□□ 0.16
TPM1-206ENST00000358278 ZNF707Q96C28 371 aaPredicted RBP16.05■□□□□ 0.16
TPM1-206ENST00000358278 HCFC1R1Q9NWW0 138 aa16.05■□□□□ 0.16
TPM1-206ENST00000358278 DOCK8Q8NF50 2099 aa16.05■□□□□ 0.16
TPM1-206ENST00000358278 HELZP42694 1942 aaKnown RBP16.05■□□□□ 0.16
TPM1-206ENST00000358278 A0A087X0T9 212 aa16.05■□□□□ 0.16
TPM1-206ENST00000358278 FAM228BP0C875 321 aa16.05■□□□□ 0.16
TPM1-206ENST00000358278 PTPN2P17706 415 aa16.05■□□□□ 0.16
TPM1-206ENST00000358278 YWHAQP27348 245 aa16.05■□□□□ 0.16
TPM1-206ENST00000358278 LTBRP36941 435 aa16.05■□□□□ 0.16
TPM1-206ENST00000358278 USP46P62068 366 aa16.05■□□□□ 0.16
TPM1-206ENST00000358278 CCDC173Q0VFZ6 552 aa16.05■□□□□ 0.16
TPM1-206ENST00000358278 CLUL1Q15846 466 aa16.05■□□□□ 0.16
TPM1-206ENST00000358278 PTPN20Q4JDL3 420 aa16.05■□□□□ 0.16
TPM1-206ENST00000358278 PPP1R2P3Q6NXS1 205 aa16.05■□□□□ 0.16
TPM1-206ENST00000358278 TMTC1Q8IUR5 882 aa16.05■□□□□ 0.16
TPM1-206ENST00000358278 OLIG1Q8TAK6 271 aa16.05■□□□□ 0.16
TPM1-206ENST00000358278 FBXO32Q969P5 355 aa16.05■□□□□ 0.16
TPM1-206ENST00000358278 TRMT2BQ96GJ1 504 aaKnown RBP16.05■□□□□ 0.16
TPM1-206ENST00000358278 SLITRK1Q96PX8 696 aa16.05■□□□□ 0.16
TPM1-206ENST00000358278 SLC4A5Q9BY07 1137 aa16.05■□□□□ 0.16
TPM1-206ENST00000358278 NRDCO43847 1150 aa16.04■□□□□ 0.16
TPM1-206ENST00000358278 GZMAP12544 262 aa16.04■□□□□ 0.16
TPM1-206ENST00000358278 HMGA1P17096 107 aaKnown RBP16.04■□□□□ 0.16
TPM1-206ENST00000358278 KCNA5P22460 613 aa16.04■□□□□ 0.16
TPM1-206ENST00000358278 FECHP22830 423 aa16.04■□□□□ 0.16
TPM1-206ENST00000358278 ITIH3Q06033 890 aa16.04■□□□□ 0.16
TPM1-206ENST00000358278 GFPT1Q06210 699 aaPredicted RBP16.04■□□□□ 0.16
TPM1-206ENST00000358278 SLC18A3Q16572 532 aa16.04■□□□□ 0.16
TPM1-206ENST00000358278 PABPC1LQ4VXU2 614 aaKnown RBP16.04■□□□□ 0.16
TPM1-206ENST00000358278 GRASPQ7Z6J2 395 aaPredicted RBP16.04■□□□□ 0.16
TPM1-206ENST00000358278 MAFAQ8NHW3 353 aaPredicted RBP16.04■□□□□ 0.16
TPM1-206ENST00000358278 MYRFLQ96LU7 910 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms