RNA–Protein interactions for RNA: ENST00000357388.7

SMC4-202, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-202ENST00000357388 WDR36Q8NI36 951 aaKnown RBP13.29□□□□□ -0.28
SMC4-202ENST00000357388 ZNF512Q96ME7 567 aaPredicted RBP13.29□□□□□ -0.28
SMC4-202ENST00000357388 HACL1Q9UJ83 578 aa13.29□□□□□ -0.28
SMC4-202ENST00000357388 ZNRF3Q9ULT6 936 aa13.29□□□□□ -0.28
SMC4-202ENST00000357388 KLHL18O94889 574 aa13.28□□□□□ -0.28
SMC4-202ENST00000357388 C6orf222P0C671 652 aaPredicted RBP13.28□□□□□ -0.28
SMC4-202ENST00000357388 ZNF157P51786 506 aaPredicted RBP13.28□□□□□ -0.28
SMC4-202ENST00000357388 TMEM132BQ14DG7 1078 aa13.28□□□□□ -0.28
SMC4-202ENST00000357388 NKX1-1Q15270 411 aaPredicted RBP13.28□□□□□ -0.28
SMC4-202ENST00000357388 CYP51A1Q16850 503 aa13.28□□□□□ -0.28
SMC4-202ENST00000357388 FAM98BQ52LJ0 330 aaKnown RBP13.28□□□□□ -0.28
SMC4-202ENST00000357388 NANOGNBQ7Z5D8 188 aa13.28□□□□□ -0.28
SMC4-202ENST00000357388 SLC13A5Q86YT5 568 aaPredicted RBP13.28□□□□□ -0.28
SMC4-202ENST00000357388 UNC45BQ8IWX7 931 aa13.28□□□□□ -0.28
SMC4-202ENST00000357388 GDPD5Q8WTR4 605 aa13.28□□□□□ -0.28
SMC4-202ENST00000357388 EIF2AK1Q9BQI3 630 aaKnown RBP13.28□□□□□ -0.28
SMC4-202ENST00000357388 DCP1AQ9NPI6 582 aaPredicted RBP13.28□□□□□ -0.28
SMC4-202ENST00000357388 IARS2Q9NSE4 1012 aaKnown RBP13.28□□□□□ -0.28
SMC4-202ENST00000357388 ADGRA2Q96PE1 1338 aa13.28□□□□□ -0.28
SMC4-202ENST00000357388 ANXA9O76027 345 aa13.28□□□□□ -0.28
SMC4-202ENST00000357388 RGS20O76081 388 aa13.28□□□□□ -0.28
SMC4-202ENST00000357388 FSBPO95073 299 aa13.28□□□□□ -0.28
SMC4-202ENST00000357388 POTEIP0CG38 1075 aa13.28□□□□□ -0.28
SMC4-202ENST00000357388 PDHBP11177 359 aa13.28□□□□□ -0.28
SMC4-202ENST00000357388 SREBF2Q12772 1141 aa13.28□□□□□ -0.28
SMC4-202ENST00000357388 TSNQ15631 228 aaKnown RBP13.28□□□□□ -0.28
SMC4-202ENST00000357388 TTLL9Q3SXZ7 439 aa13.28□□□□□ -0.28
SMC4-202ENST00000357388 SNX30Q5VWJ9 437 aa13.28□□□□□ -0.28
SMC4-202ENST00000357388 POTEGQ6S5H5 508 aa13.28□□□□□ -0.28
SMC4-202ENST00000357388 LDHDQ86WU2 507 aa13.28□□□□□ -0.28
SMC4-202ENST00000357388 DENND6AQ8IWF6 608 aa13.28□□□□□ -0.28
SMC4-202ENST00000357388 SAR1AQ9NR31 198 aa13.28□□□□□ -0.28
SMC4-202ENST00000357388 PCDHB2Q9Y5E7 798 aa13.28□□□□□ -0.28
SMC4-202ENST00000357388 TPST1O60507 370 aa13.28□□□□□ -0.28
SMC4-202ENST00000357388 CBFA2T3O75081 653 aa13.28□□□□□ -0.28
SMC4-202ENST00000357388 SLC25A27O95847 323 aa13.28□□□□□ -0.28
SMC4-202ENST00000357388 CYP2D6P10635 497 aa13.28□□□□□ -0.28
SMC4-202ENST00000357388 TFE3P19532 575 aaPredicted RBP13.28□□□□□ -0.28
SMC4-202ENST00000357388 KCNMA1Q12791 1236 aa13.28□□□□□ -0.28
SMC4-202ENST00000357388 PHKG1Q16816 387 aa13.28□□□□□ -0.28
SMC4-202ENST00000357388 PTRHD1Q6GMV3 140 aaKnown RBP13.28□□□□□ -0.28
SMC4-202ENST00000357388 DENND1BQ6P3S1 775 aa13.28□□□□□ -0.28
SMC4-202ENST00000357388 CLVS1Q8IUQ0 354 aaPredicted RBP13.28□□□□□ -0.28
SMC4-202ENST00000357388 SPATA18Q8TC71 538 aa13.28□□□□□ -0.28
SMC4-202ENST00000357388 C9orf16Q9BUW7 83 aa13.28□□□□□ -0.28
SMC4-202ENST00000357388 GANQ9H2C0 597 aa13.28□□□□□ -0.28
SMC4-202ENST00000357388 L1RE1Q9UN81 338 aa13.28□□□□□ -0.28
SMC4-202ENST00000357388 ZDHHC9Q9Y397 364 aa13.28□□□□□ -0.28
SMC4-202ENST00000357388 ALG6Q9Y672 507 aa13.28□□□□□ -0.28
SMC4-202ENST00000357388 COMMD3-BMI1R4GMX3 469 aa13.28□□□□□ -0.28
SMC4-202ENST00000357388 LINC00854A0A1B0GVQ3 168 aa13.28□□□□□ -0.28
SMC4-202ENST00000357388 UBOX5O94941 541 aa13.28□□□□□ -0.28
SMC4-202ENST00000357388 FYNP06241 537 aa13.28□□□□□ -0.28
SMC4-202ENST00000357388 SHROOM1Q2M3G4 852 aaPredicted RBP13.28□□□□□ -0.28
SMC4-202ENST00000357388 PDPK2PQ6A1A2 396 aa13.28□□□□□ -0.28
SMC4-202ENST00000357388 LRRC74BQ6ZQY2 392 aa13.28□□□□□ -0.28
SMC4-202ENST00000357388 KYQ8NBH2 561 aa13.28□□□□□ -0.28
SMC4-202ENST00000357388 DLG3Q92796 817 aa13.28□□□□□ -0.28
SMC4-202ENST00000357388 ERGIC2Q96RQ1 377 aa13.28□□□□□ -0.28
SMC4-202ENST00000357388 UBE2OQ9C0C9 1292 aaKnown RBP13.28□□□□□ -0.28
SMC4-202ENST00000357388 ELP3Q9H9T3 547 aa13.28□□□□□ -0.28
SMC4-202ENST00000357388 INTS13Q9NVM9 706 aa13.28□□□□□ -0.28
SMC4-202ENST00000357388 UGGT1Q9NYU2 1555 aa13.28□□□□□ -0.28
SMC4-202ENST00000357388 LCA5LO95447 670 aa13.27□□□□□ -0.28
SMC4-202ENST00000357388 ITGA4P13612 1032 aa13.27□□□□□ -0.28
SMC4-202ENST00000357388 WARSP23381 471 aaKnown RBP13.27□□□□□ -0.28
SMC4-202ENST00000357388 SERPINB5P36952 375 aa13.27□□□□□ -0.28
SMC4-202ENST00000357388 HMGCS2P54868 508 aa13.27□□□□□ -0.28
SMC4-202ENST00000357388 TBCELQ5QJ74 424 aa13.27□□□□□ -0.28
SMC4-202ENST00000357388 ZNF618Q5T7W0 954 aa13.27□□□□□ -0.28
SMC4-202ENST00000357388 FAM180AQ6UWF9 173 aa13.27□□□□□ -0.28
SMC4-202ENST00000357388 TMEM26Q6ZUK4 368 aa13.27□□□□□ -0.28
SMC4-202ENST00000357388 FNIP1Q8TF40 1166 aa13.27□□□□□ -0.28
SMC4-202ENST00000357388 MUC3BQ9H195 1237 aa13.27□□□□□ -0.28
SMC4-202ENST00000357388 PLGRKTQ9HBL7 147 aa13.27□□□□□ -0.28
SMC4-202ENST00000357388 AP3M1Q9Y2T2 418 aa13.27□□□□□ -0.28
SMC4-202ENST00000357388 V9GYQ6 96 aa13.27□□□□□ -0.28
SMC4-202ENST00000357388 RPS6KA5O75582 802 aa13.27□□□□□ -0.28
SMC4-202ENST00000357388 RARBP10826 455 aa13.27□□□□□ -0.28
SMC4-202ENST00000357388 ATP6V1B2P21281 511 aa13.27□□□□□ -0.28
SMC4-202ENST00000357388 PAX7P23759 505 aa13.27□□□□□ -0.28
SMC4-202ENST00000357388 PTGER2P43116 358 aa13.27□□□□□ -0.28
SMC4-202ENST00000357388 PUDPQ08623 228 aa13.27□□□□□ -0.28
SMC4-202ENST00000357388 ZNF57Q68EA5 555 aaPredicted RBP13.27□□□□□ -0.28
SMC4-202ENST00000357388 CYB5R4Q7L1T6 521 aa13.27□□□□□ -0.28
SMC4-202ENST00000357388 ADGRF4Q8IZF3 695 aa13.27□□□□□ -0.28
SMC4-202ENST00000357388 NEDD1Q8NHV4 660 aa13.27□□□□□ -0.28
SMC4-202ENST00000357388 STK32AQ8WU08 396 aa13.27□□□□□ -0.28
SMC4-202ENST00000357388 CAMKK2Q96RR4 588 aa13.27□□□□□ -0.28
SMC4-202ENST00000357388 SLC39A10Q9ULF5 831 aa13.27□□□□□ -0.28
SMC4-202ENST00000357388 STARD13Q9Y3M8 1113 aa13.27□□□□□ -0.28
SMC4-202ENST00000357388 ADGRL3Q9HAR2 1447 aa13.27□□□□□ -0.29
SMC4-202ENST00000357388 E9PBE3 544 aa13.27□□□□□ -0.29
SMC4-202ENST00000357388 AREL1O15033 823 aa13.27□□□□□ -0.29
SMC4-202ENST00000357388 KATNA1O75449 491 aa13.27□□□□□ -0.29
SMC4-202ENST00000357388 ITGAXP20702 1163 aa13.27□□□□□ -0.29
SMC4-202ENST00000357388 CACNB2Q08289 660 aaPredicted RBP13.27□□□□□ -0.29
SMC4-202ENST00000357388 KCNT1Q5JUK3 1230 aa13.27□□□□□ -0.29
SMC4-202ENST00000357388 C16orf62Q7Z3J2 963 aa13.27□□□□□ -0.29
SMC4-202ENST00000357388 ERO1BQ86YB8 467 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms