RNA–Protein interactions for RNA: ENST00000357250.10

COL9A1-202, Transcript of collagen type IX alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A1, Length 4,761 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-202ENST00000357250 AVENQ9NQS1 362 aaPredicted RBP12.17□□□□□ -0.46
COL9A1-202ENST00000357250 TUBGCP4Q9UGJ1 667 aa12.17□□□□□ -0.46
COL9A1-202ENST00000357250 GPR182O15218 404 aa12.17□□□□□ -0.46
COL9A1-202ENST00000357250 HOXA2O43364 376 aa12.17□□□□□ -0.46
COL9A1-202ENST00000357250 GHRP10912 638 aa12.17□□□□□ -0.46
COL9A1-202ENST00000357250 DNAJB2P25686 324 aa12.17□□□□□ -0.46
COL9A1-202ENST00000357250 MKRN4PQ13434 485 aaPredicted RBP12.17□□□□□ -0.46
COL9A1-202ENST00000357250 TMEM119Q4V9L6 283 aa12.17□□□□□ -0.46
COL9A1-202ENST00000357250 COBLL1Q53SF7 1204 aa12.17□□□□□ -0.46
COL9A1-202ENST00000357250 MROH9Q5TGP6 573 aa12.17□□□□□ -0.46
COL9A1-202ENST00000357250 SLC30A9Q6PML9 568 aa12.17□□□□□ -0.46
COL9A1-202ENST00000357250 ZNF571Q7Z3V5 609 aaPredicted RBP12.17□□□□□ -0.46
COL9A1-202ENST00000357250 YAF2Q8IY57 180 aa12.17□□□□□ -0.46
COL9A1-202ENST00000357250 JADE3Q92613 823 aa12.17□□□□□ -0.46
COL9A1-202ENST00000357250 COLEC11Q9BWP8 271 aa12.17□□□□□ -0.46
COL9A1-202ENST00000357250 SPATA16Q9BXB7 569 aa12.17□□□□□ -0.46
COL9A1-202ENST00000357250 TBC1D23Q9NUY8 699 aa12.17□□□□□ -0.46
COL9A1-202ENST00000357250 DDIT4Q9NX09 232 aa12.17□□□□□ -0.46
COL9A1-202ENST00000357250 CHORDC1Q9UHD1 332 aaPredicted RBP12.17□□□□□ -0.46
COL9A1-202ENST00000357250 FAM237AA0A1B0GTK4 181 aa12.16□□□□□ -0.46
COL9A1-202ENST00000357250 H7C4K7 107 aa12.16□□□□□ -0.46
COL9A1-202ENST00000357250 STX7O15400 261 aaKnown RBP12.16□□□□□ -0.46
COL9A1-202ENST00000357250 RBP1P09455 135 aa12.16□□□□□ -0.46
COL9A1-202ENST00000357250 ZNF135P52742 658 aaPredicted RBP12.16□□□□□ -0.46
COL9A1-202ENST00000357250 TDRD10Q5VZ19 366 aaKnown RBP12.16□□□□□ -0.46
COL9A1-202ENST00000357250 PKN3Q6P5Z2 889 aa12.16□□□□□ -0.46
COL9A1-202ENST00000357250 ERO1BQ86YB8 467 aa12.16□□□□□ -0.46
COL9A1-202ENST00000357250 BBS7Q8IWZ6 715 aa12.16□□□□□ -0.46
COL9A1-202ENST00000357250 ABRAQ8N0Z2 381 aa12.16□□□□□ -0.46
COL9A1-202ENST00000357250 CBWD1Q9BRT8 395 aa12.16□□□□□ -0.46
COL9A1-202ENST00000357250 SIKE1Q9BRV8 207 aa12.16□□□□□ -0.46
COL9A1-202ENST00000357250 GPR63Q9BZJ6 419 aa12.16□□□□□ -0.46
COL9A1-202ENST00000357250 ADNPQ9H2P0 1102 aa12.16□□□□□ -0.46
COL9A1-202ENST00000357250 IL1RAPL1Q9NZN1 696 aa12.16□□□□□ -0.46
COL9A1-202ENST00000357250 GGT7Q9UJ14 662 aa12.16□□□□□ -0.46
COL9A1-202ENST00000357250 CCL15-CCL14A0A0B4J2E2 113 aa12.16□□□□□ -0.46
COL9A1-202ENST00000357250 C17orf102A2RUQ5 167 aa12.16□□□□□ -0.46
COL9A1-202ENST00000357250 C2orf81A6NN90 581 aa12.16□□□□□ -0.46
COL9A1-202ENST00000357250 M0QYT0 321 aa12.16□□□□□ -0.46
COL9A1-202ENST00000357250 KPNA6O60684 536 aa12.16□□□□□ -0.46
COL9A1-202ENST00000357250 RHOBTB1O94844 696 aa12.16□□□□□ -0.46
COL9A1-202ENST00000357250 SYF2O95926 243 aaKnown RBP12.16□□□□□ -0.46
COL9A1-202ENST00000357250 EGFRP00533 1210 aa12.16□□□□□ -0.46
COL9A1-202ENST00000357250 CALB2P22676 271 aa12.16□□□□□ -0.46
COL9A1-202ENST00000357250 CACNB2Q08289 660 aaPredicted RBP12.16□□□□□ -0.46
COL9A1-202ENST00000357250 ACAP1Q15027 740 aa12.16□□□□□ -0.46
COL9A1-202ENST00000357250 CCL15Q16663 113 aa12.16□□□□□ -0.46
COL9A1-202ENST00000357250 CYP4A22Q5TCH4 519 aa12.16□□□□□ -0.46
COL9A1-202ENST00000357250 DENND1BQ6P3S1 775 aa12.16□□□□□ -0.46
COL9A1-202ENST00000357250 FBXO36Q8NEA4 188 aa12.16□□□□□ -0.46
COL9A1-202ENST00000357250 RIN3Q8TB24 985 aa12.16□□□□□ -0.46
COL9A1-202ENST00000357250 GANQ9H2C0 597 aa12.16□□□□□ -0.46
COL9A1-202ENST00000357250 NOD2Q9HC29 1040 aa12.16□□□□□ -0.46
COL9A1-202ENST00000357250 SEPT3Q9UH03 358 aa12.16□□□□□ -0.46
COL9A1-202ENST00000357250 SH3BP1Q9Y3L3 701 aa12.16□□□□□ -0.46
COL9A1-202ENST00000357250 SLC4A7Q9Y6M7 1214 aa12.16□□□□□ -0.46
COL9A1-202ENST00000357250 LRRC10BA6NIK2 292 aa12.16□□□□□ -0.46
COL9A1-202ENST00000357250 LHX1P48742 406 aa12.16□□□□□ -0.46
COL9A1-202ENST00000357250 CASP4P49662 377 aa12.16□□□□□ -0.46
COL9A1-202ENST00000357250 SHROOM1Q2M3G4 852 aaPredicted RBP12.16□□□□□ -0.46
COL9A1-202ENST00000357250 CYB5D1Q6P9G0 228 aa12.16□□□□□ -0.46
COL9A1-202ENST00000357250 FBXO25Q8TCJ0 367 aa12.16□□□□□ -0.46
COL9A1-202ENST00000357250 FAM111AQ96PZ2 611 aa12.16□□□□□ -0.46
COL9A1-202ENST00000357250 PDCD2LQ9BRP1 358 aa12.16□□□□□ -0.46
COL9A1-202ENST00000357250 CDC42EP4Q9H3Q1 356 aaKnown RBP12.16□□□□□ -0.46
COL9A1-202ENST00000357250 DCLRE1BQ9H816 532 aa12.16□□□□□ -0.46
COL9A1-202ENST00000357250 AGO4Q9HCK5 861 aaKnown RBP12.16□□□□□ -0.46
COL9A1-202ENST00000357250 GPRC5CQ9NQ84 441 aa12.16□□□□□ -0.46
COL9A1-202ENST00000357250 NFAT5O94916 1531 aa12.16□□□□□ -0.46
COL9A1-202ENST00000357250 MAGEA13PA6NCF6 341 aa12.15□□□□□ -0.46
COL9A1-202ENST00000357250 SPDYE5A6NIY4 337 aa12.15□□□□□ -0.46
COL9A1-202ENST00000357250 NFIBO00712 420 aa12.15□□□□□ -0.46
COL9A1-202ENST00000357250 ARP10275 920 aa12.15□□□□□ -0.46
COL9A1-202ENST00000357250 NQO1P15559 274 aaKnown RBP12.15□□□□□ -0.46
COL9A1-202ENST00000357250 FKBP1AP62942 108 aaKnown RBP12.15□□□□□ -0.46
COL9A1-202ENST00000357250 OTUD4Q01804 1114 aaKnown RBP12.15□□□□□ -0.46
COL9A1-202ENST00000357250 POU4F1Q01851 419 aa12.15□□□□□ -0.46
COL9A1-202ENST00000357250 TBX2Q13207 712 aaPredicted RBP12.15□□□□□ -0.46
COL9A1-202ENST00000357250 SPDYE7PQ495Y7 208 aa12.15□□□□□ -0.46
COL9A1-202ENST00000357250 SLFN11Q7Z7L1 901 aa12.15□□□□□ -0.46
COL9A1-202ENST00000357250 ITGA11Q9UKX5 1188 aa12.15□□□□□ -0.46
COL9A1-202ENST00000357250 STAG3L1P0CL83 205 aa12.15□□□□□ -0.46
COL9A1-202ENST00000357250 RRM1P23921 792 aa12.15□□□□□ -0.46
COL9A1-202ENST00000357250 S100A5P33763 92 aa12.15□□□□□ -0.46
COL9A1-202ENST00000357250 GTF2A2P52657 109 aa12.15□□□□□ -0.46
COL9A1-202ENST00000357250 ZNF268Q14587 947 aaPredicted RBP12.15□□□□□ -0.46
COL9A1-202ENST00000357250 KIZQ2M2Z5 673 aa12.15□□□□□ -0.46
COL9A1-202ENST00000357250 EPC2Q52LR7 807 aa12.15□□□□□ -0.46
COL9A1-202ENST00000357250 METTL7BQ6UX53 244 aa12.15□□□□□ -0.46
COL9A1-202ENST00000357250 ZPBP2Q6X784 338 aa12.15□□□□□ -0.46
COL9A1-202ENST00000357250 RFX8Q6ZV50 586 aa12.15□□□□□ -0.46
COL9A1-202ENST00000357250 KLF6Q99612 283 aaPredicted RBP12.15□□□□□ -0.46
COL9A1-202ENST00000357250 TRMT6Q9UJA5 497 aaKnown RBP12.15□□□□□ -0.46
COL9A1-202ENST00000357250 CCDC78A2IDD5 438 aa12.15□□□□□ -0.46
COL9A1-202ENST00000357250 HEATR9A2RTY3 570 aa12.15□□□□□ -0.46
COL9A1-202ENST00000357250 VWA5AO00534 786 aa12.15□□□□□ -0.46
COL9A1-202ENST00000357250 FKBP6O75344 327 aa12.15□□□□□ -0.46
COL9A1-202ENST00000357250 MAPK1P28482 360 aa12.15□□□□□ -0.46
COL9A1-202ENST00000357250 RGS2P41220 211 aa12.15□□□□□ -0.46
COL9A1-202ENST00000357250 ALDH1A3P47895 512 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms