RNA–Protein interactions for RNA: ENST00000357235.5

CDC42SE1-201, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE1, Length 3,045 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-201ENST00000357235 MFSD14AQ96MC6 490 aa8.6□□□□□ -1.03
CDC42SE1-201ENST00000357235 BTBD10Q9BSF8 475 aa8.6□□□□□ -1.03
CDC42SE1-201ENST00000357235 CALN1Q9BXU9 219 aa8.6□□□□□ -1.03
CDC42SE1-201ENST00000357235 SLC13A1Q9BZW2 595 aa8.6□□□□□ -1.03
CDC42SE1-201ENST00000357235 APOBEC3GQ9HC16 384 aaKnown RBP8.6□□□□□ -1.03
CDC42SE1-201ENST00000357235 INIPQ9NRY2 104 aa8.6□□□□□ -1.03
CDC42SE1-201ENST00000357235 TUBA8Q9NY65 449 aaPredicted RBP8.6□□□□□ -1.03
CDC42SE1-201ENST00000357235 RBAKQ9NYW8 714 aaPredicted RBP8.6□□□□□ -1.03
CDC42SE1-201ENST00000357235 IP6K2Q9UHH9 426 aa8.6□□□□□ -1.03
CDC42SE1-201ENST00000357235 WASF2Q9Y6W5 498 aa8.6□□□□□ -1.03
CDC42SE1-201ENST00000357235 HTR3EA5X5Y0 456 aa8.59□□□□□ -1.03
CDC42SE1-201ENST00000357235 GSC2O15499 205 aa8.59□□□□□ -1.03
CDC42SE1-201ENST00000357235 RAD17O75943 681 aa8.59□□□□□ -1.03
CDC42SE1-201ENST00000357235 KRT38O76015 456 aa8.59□□□□□ -1.03
CDC42SE1-201ENST00000357235 INHBAP08476 426 aa8.59□□□□□ -1.03
CDC42SE1-201ENST00000357235 CD19P15391 556 aa8.59□□□□□ -1.03
CDC42SE1-201ENST00000357235 PGM1P36871 562 aa8.59□□□□□ -1.03
CDC42SE1-201ENST00000357235 GALK1P51570 392 aa8.59□□□□□ -1.03
CDC42SE1-201ENST00000357235 VCPP55072 806 aaKnown RBP8.59□□□□□ -1.03
CDC42SE1-201ENST00000357235 ARL4CP56559 192 aa8.59□□□□□ -1.03
CDC42SE1-201ENST00000357235 GSTM4Q03013 218 aa8.59□□□□□ -1.03
CDC42SE1-201ENST00000357235 AP1B1Q10567 949 aa8.59□□□□□ -1.03
CDC42SE1-201ENST00000357235 TTLL12Q14166 644 aaPredicted RBP8.59□□□□□ -1.03
CDC42SE1-201ENST00000357235 RNASEH2BQ5TBB1 312 aaKnown RBP8.59□□□□□ -1.03
CDC42SE1-201ENST00000357235 SAPCD2Q86UD0 394 aa8.59□□□□□ -1.03
CDC42SE1-201ENST00000357235 PDIK1LQ8N165 341 aa8.59□□□□□ -1.03
CDC42SE1-201ENST00000357235 TMC2Q8TDI7 906 aa8.59□□□□□ -1.03
CDC42SE1-201ENST00000357235 IRGQQ8WZA9 623 aa8.59□□□□□ -1.03
CDC42SE1-201ENST00000357235 NSL1Q96IY1 281 aa8.59□□□□□ -1.03
CDC42SE1-201ENST00000357235 MAML3Q96JK9 1138 aa8.59□□□□□ -1.03
CDC42SE1-201ENST00000357235 CLPTM1LQ96KA5 538 aa8.59□□□□□ -1.03
CDC42SE1-201ENST00000357235 MECRQ9BV79 373 aa8.59□□□□□ -1.03
CDC42SE1-201ENST00000357235 IMPG2Q9BZV3 1241 aa8.59□□□□□ -1.03
CDC42SE1-201ENST00000357235 TBC1D22BQ9NU19 505 aa8.59□□□□□ -1.03
CDC42SE1-201ENST00000357235 PPARGC1AQ9UBK2 798 aaKnown RBP8.59□□□□□ -1.03
CDC42SE1-201ENST00000357235 AGO2Q9UKV8 859 aaKnown RBP8.59□□□□□ -1.03
CDC42SE1-201ENST00000357235 EFR3BQ9Y2G0 817 aa8.59□□□□□ -1.03
CDC42SE1-201ENST00000357235 CLUHO75153 1309 aa8.59□□□□□ -1.03
CDC42SE1-201ENST00000357235 B2RBV5 119 aa8.59□□□□□ -1.03
CDC42SE1-201ENST00000357235 ALOX15BO15296 676 aa8.59□□□□□ -1.03
CDC42SE1-201ENST00000357235 AVILO75366 819 aa8.59□□□□□ -1.03
CDC42SE1-201ENST00000357235 MMP10P09238 476 aa8.59□□□□□ -1.03
CDC42SE1-201ENST00000357235 PTK7Q13308 1070 aa8.59□□□□□ -1.03
CDC42SE1-201ENST00000357235 ORC1Q13415 861 aa8.59□□□□□ -1.03
CDC42SE1-201ENST00000357235 MTMR2Q13614 643 aa8.59□□□□□ -1.03
CDC42SE1-201ENST00000357235 TFDP3Q5H9I0 405 aa8.59□□□□□ -1.03
CDC42SE1-201ENST00000357235 TRIM50Q86XT4 487 aa8.59□□□□□ -1.03
CDC42SE1-201ENST00000357235 C4orf19Q8IY42 314 aa8.59□□□□□ -1.03
CDC42SE1-201ENST00000357235 EMC1Q8N766 993 aa8.59□□□□□ -1.03
CDC42SE1-201ENST00000357235 LRRN4Q8WUT4 740 aa8.59□□□□□ -1.03
CDC42SE1-201ENST00000357235 ZNF606Q8WXB4 792 aa8.59□□□□□ -1.03
CDC42SE1-201ENST00000357235 HSPH1Q92598 858 aa8.59□□□□□ -1.03
CDC42SE1-201ENST00000357235 CFAP36Q96G28 342 aa8.59□□□□□ -1.03
CDC42SE1-201ENST00000357235 MASTLQ96GX5 879 aa8.59□□□□□ -1.03
CDC42SE1-201ENST00000357235 DNAJC1Q96KC8 554 aaKnown RBP8.59□□□□□ -1.03
CDC42SE1-201ENST00000357235 RILPQ96NA2 401 aa8.59□□□□□ -1.03
CDC42SE1-201ENST00000357235 POLR3FQ9H1D9 316 aaPredicted RBP8.59□□□□□ -1.03
CDC42SE1-201ENST00000357235 SYNCQ9H7C4 482 aa8.59□□□□□ -1.03
CDC42SE1-201ENST00000357235 TRPV5Q9NQA5 729 aa8.59□□□□□ -1.03
CDC42SE1-201ENST00000357235 TAS2R1Q9NYW7 299 aa8.59□□□□□ -1.03
CDC42SE1-201ENST00000357235 CLIC5Q9NZA1 410 aa8.59□□□□□ -1.03
CDC42SE1-201ENST00000357235 XPO7Q9UIA9 1087 aaKnown RBP8.59□□□□□ -1.03
CDC42SE1-201ENST00000357235 RABGEF1Q9UJ41 708 aa8.59□□□□□ -1.03
CDC42SE1-201ENST00000357235 SERPINA10Q9UK55 444 aa8.59□□□□□ -1.03
CDC42SE1-201ENST00000357235 BOLA2-SMG1P6H3BVE0 249 aa8.59□□□□□ -1.04
CDC42SE1-201ENST00000357235 OPHN1O60890 802 aa8.59□□□□□ -1.04
CDC42SE1-201ENST00000357235 FAM155BO75949 473 aa8.59□□□□□ -1.04
CDC42SE1-201ENST00000357235 WEE2P0C1S8 567 aa8.59□□□□□ -1.04
CDC42SE1-201ENST00000357235 AMPD1P23109 780 aa8.59□□□□□ -1.04
CDC42SE1-201ENST00000357235 PSMA2P25787 234 aa8.59□□□□□ -1.04
CDC42SE1-201ENST00000357235 RGS2P41220 211 aa8.59□□□□□ -1.04
CDC42SE1-201ENST00000357235 OGDHQ02218 1023 aa8.59□□□□□ -1.04
CDC42SE1-201ENST00000357235 THOC7Q6I9Y2 204 aaKnown RBP8.59□□□□□ -1.04
CDC42SE1-201ENST00000357235 ZBTB33Q86T24 672 aa8.59□□□□□ -1.04
CDC42SE1-201ENST00000357235 OR5B17Q8NGF7 314 aa8.59□□□□□ -1.04
CDC42SE1-201ENST00000357235 TARS2Q9BW92 718 aaKnown RBP8.59□□□□□ -1.04
CDC42SE1-201ENST00000357235 NMUR2Q9GZQ4 415 aa8.59□□□□□ -1.04
CDC42SE1-201ENST00000357235 ZNF395Q9H8N7 513 aaPredicted RBP8.59□□□□□ -1.04
CDC42SE1-201ENST00000357235 SLC24A2Q9UI40 661 aa8.59□□□□□ -1.04
CDC42SE1-201ENST00000357235 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.58□□□□□ -1.04
CDC42SE1-201ENST00000357235 PIK3R2O00459 728 aa8.58□□□□□ -1.04
CDC42SE1-201ENST00000357235 MAGEB3O15480 346 aa8.58□□□□□ -1.04
CDC42SE1-201ENST00000357235 ATP9BO43861 1147 aa8.58□□□□□ -1.04
CDC42SE1-201ENST00000357235 CD48P09326 243 aa8.58□□□□□ -1.04
CDC42SE1-201ENST00000357235 PORP16435 677 aaPredicted RBP8.58□□□□□ -1.04
CDC42SE1-201ENST00000357235 HDAC4P56524 1084 aa8.58□□□□□ -1.04
CDC42SE1-201ENST00000357235 ZACNQ401N2 412 aa8.58□□□□□ -1.04
CDC42SE1-201ENST00000357235 SH3D19Q5HYK7 790 aa8.58□□□□□ -1.04
CDC42SE1-201ENST00000357235 FAXCQ5TGI0 409 aa8.58□□□□□ -1.04
CDC42SE1-201ENST00000357235 FAM160B2Q86V87 743 aa8.58□□□□□ -1.04
CDC42SE1-201ENST00000357235 ZNF677Q86XU0 584 aa8.58□□□□□ -1.04
CDC42SE1-201ENST00000357235 RFX6Q8HWS3 928 aa8.58□□□□□ -1.04
CDC42SE1-201ENST00000357235 ARID3BQ8IVW6 561 aaPredicted RBP8.58□□□□□ -1.04
CDC42SE1-201ENST00000357235 OGFOD1Q8N543 542 aa8.58□□□□□ -1.04
CDC42SE1-201ENST00000357235 PPM1NQ8N819 430 aa8.58□□□□□ -1.04
CDC42SE1-201ENST00000357235 HIPK4Q8NE63 616 aa8.58□□□□□ -1.04
CDC42SE1-201ENST00000357235 SYTL5Q8TDW5 730 aaPredicted RBP8.58□□□□□ -1.04
CDC42SE1-201ENST00000357235 THTPAQ9BU02 230 aa8.58□□□□□ -1.04
CDC42SE1-201ENST00000357235 MSTO1Q9BUK6 570 aa8.58□□□□□ -1.04
CDC42SE1-201ENST00000357235 FOXP3Q9BZS1 431 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms