RNA–Protein interactions for RNA: ENST00000357207.8

TRAPPC11-202, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,435 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-202ENST00000357207 SLC12A3P55017 1021 aa16.16■□□□□ 0.18
TRAPPC11-202ENST00000357207 DENND5BQ6ZUT9 1274 aa16.16■□□□□ 0.18
TRAPPC11-202ENST00000357207 PABPC5Q96DU9 382 aaKnown RBP16.16■□□□□ 0.18
TRAPPC11-202ENST00000357207 LRRC40Q9H9A6 602 aa16.16■□□□□ 0.18
TRAPPC11-202ENST00000357207 KIAA1257Q9ULG3 409 aa16.16■□□□□ 0.18
TRAPPC11-202ENST00000357207 ARHGEF9O43307 516 aa16.16■□□□□ 0.18
TRAPPC11-202ENST00000357207 VDRP11473 427 aa16.16■□□□□ 0.18
TRAPPC11-202ENST00000357207 CDC25CP30307 473 aa16.16■□□□□ 0.18
TRAPPC11-202ENST00000357207 NAMPTP43490 491 aa16.16■□□□□ 0.18
TRAPPC11-202ENST00000357207 R3HDM1Q15032 1099 aaKnown RBP16.16■□□□□ 0.18
TRAPPC11-202ENST00000357207 GPR141Q7Z602 305 aa16.16■□□□□ 0.18
TRAPPC11-202ENST00000357207 DDHD1Q8NEL9 900 aa16.16■□□□□ 0.18
TRAPPC11-202ENST00000357207 RNF217Q8TC41 542 aa16.16■□□□□ 0.18
TRAPPC11-202ENST00000357207 GPATCH2LQ9NWQ4 482 aa16.16■□□□□ 0.18
TRAPPC11-202ENST00000357207 SERPINB8P50452 374 aa16.16■□□□□ 0.18
TRAPPC11-202ENST00000357207 KCNK10P57789 538 aa16.16■□□□□ 0.18
TRAPPC11-202ENST00000357207 OTOP1Q7RTM1 612 aa16.16■□□□□ 0.18
TRAPPC11-202ENST00000357207 PLD3Q8IV08 490 aa16.16■□□□□ 0.18
TRAPPC11-202ENST00000357207 ZCCHC9Q8N567 271 aaKnown RBP16.16■□□□□ 0.18
TRAPPC11-202ENST00000357207 APOPT1Q96IL0 206 aa16.16■□□□□ 0.18
TRAPPC11-202ENST00000357207 CASS4Q9NQ75 786 aa16.16■□□□□ 0.18
TRAPPC11-202ENST00000357207 PCDHGB4Q9UN71 923 aa16.16■□□□□ 0.18
TRAPPC11-202ENST00000357207 NDUFS3O75489 264 aa16.15■□□□□ 0.18
TRAPPC11-202ENST00000357207 NFKBIAP25963 317 aa16.15■□□□□ 0.18
TRAPPC11-202ENST00000357207 CASP5P51878 434 aa16.15■□□□□ 0.18
TRAPPC11-202ENST00000357207 TBL3Q12788 808 aaKnown RBP16.15■□□□□ 0.18
TRAPPC11-202ENST00000357207 ORC1Q13415 861 aa16.15■□□□□ 0.18
TRAPPC11-202ENST00000357207 OASLQ15646 514 aaKnown RBP16.15■□□□□ 0.18
TRAPPC11-202ENST00000357207 PCSK7Q16549 785 aa16.15■□□□□ 0.18
TRAPPC11-202ENST00000357207 EFCAB12Q6NXP0 572 aa16.15■□□□□ 0.18
TRAPPC11-202ENST00000357207 OTUD5Q96G74 571 aa16.15■□□□□ 0.18
TRAPPC11-202ENST00000357207 SRPK1Q96SB4 655 aaKnown RBP16.15■□□□□ 0.18
TRAPPC11-202ENST00000357207 STARD13Q9Y3M8 1113 aa16.15■□□□□ 0.18
TRAPPC11-202ENST00000357207 MROH1Q8NDA8 1641 aa16.15■□□□□ 0.18
TRAPPC11-202ENST00000357207 CD4P01730 458 aa16.15■□□□□ 0.18
TRAPPC11-202ENST00000357207 CHRNA5P30532 468 aa16.15■□□□□ 0.18
TRAPPC11-202ENST00000357207 MYL6P60660 151 aa16.15■□□□□ 0.18
TRAPPC11-202ENST00000357207 PDPK2PQ6A1A2 396 aa16.15■□□□□ 0.18
TRAPPC11-202ENST00000357207 PPP1R2P1Q96PQ5 205 aa16.15■□□□□ 0.18
TRAPPC11-202ENST00000357207 ZNF184Q99676 751 aaPredicted RBP16.15■□□□□ 0.18
TRAPPC11-202ENST00000357207 TMEM39BQ9GZU3 492 aa16.15■□□□□ 0.18
TRAPPC11-202ENST00000357207 TAS2R14Q9NYV8 317 aa16.15■□□□□ 0.18
TRAPPC11-202ENST00000357207 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.15■□□□□ 0.186e-6■■□□□ 12.6
TRAPPC11-202ENST00000357207 SEPT3Q9UH03 358 aa16.15■□□□□ 0.18
TRAPPC11-202ENST00000357207 ZNRF3Q9ULT6 936 aa16.15■□□□□ 0.18
TRAPPC11-202ENST00000357207 NUP107P57740 925 aa16.15■□□□□ 0.18
TRAPPC11-202ENST00000357207 CDK16Q00536 496 aa16.15■□□□□ 0.18
TRAPPC11-202ENST00000357207 RFWD2Q8NHY2 731 aa16.15■□□□□ 0.18
TRAPPC11-202ENST00000357207 EPS8L1Q8TE68 723 aa16.15■□□□□ 0.18
TRAPPC11-202ENST00000357207 TBC1D10AQ9BXI6 508 aa16.15■□□□□ 0.18
TRAPPC11-202ENST00000357207 ZNF212Q9UDV6 495 aa16.15■□□□□ 0.18
TRAPPC11-202ENST00000357207 ACTL7BQ9Y614 415 aa16.15■□□□□ 0.18
TRAPPC11-202ENST00000357207 SUPT7LO94864 414 aa16.14■□□□□ 0.17
TRAPPC11-202ENST00000357207 TMCC1O94876 653 aa16.14■□□□□ 0.17
TRAPPC11-202ENST00000357207 KRT8P05787 483 aa16.14■□□□□ 0.17
TRAPPC11-202ENST00000357207 MAP3K10Q02779 954 aa16.14■□□□□ 0.17
TRAPPC11-202ENST00000357207 CACNB2Q08289 660 aaPredicted RBP16.14■□□□□ 0.17
TRAPPC11-202ENST00000357207 LINC00523Q86TU6 105 aa16.14■□□□□ 0.17
TRAPPC11-202ENST00000357207 FAM172AQ8WUF8 416 aa16.14■□□□□ 0.17
TRAPPC11-202ENST00000357207 RXFP2Q8WXD0 754 aa16.14■□□□□ 0.17
TRAPPC11-202ENST00000357207 HES6Q96HZ4 224 aa16.14■□□□□ 0.17
TRAPPC11-202ENST00000357207 FRMPD4Q14CM0 1322 aa16.14■□□□□ 0.17
TRAPPC11-202ENST00000357207 SLCO1B7G3V0H7 640 aa16.14■□□□□ 0.17
TRAPPC11-202ENST00000357207 EML1O00423 815 aa16.14■□□□□ 0.17
TRAPPC11-202ENST00000357207 HBP1O60381 514 aa16.14■□□□□ 0.17
TRAPPC11-202ENST00000357207 MYO1DO94832 1006 aa16.14■□□□□ 0.17
TRAPPC11-202ENST00000357207 PSMA4P25789 261 aaKnown RBP16.14■□□□□ 0.17
TRAPPC11-202ENST00000357207 PTK2BQ14289 1009 aa16.14■□□□□ 0.17
TRAPPC11-202ENST00000357207 THAP1Q9NVV9 213 aa16.14■□□□□ 0.17
TRAPPC11-202ENST00000357207 POLLQ9UGP5 575 aa16.14■□□□□ 0.17
TRAPPC11-202ENST00000357207 ARHGEF28Q8N1W1 1705 aaKnown RBP16.14■□□□□ 0.17
TRAPPC11-202ENST00000357207 KBTBD13C9JR72 458 aa16.14■□□□□ 0.17
TRAPPC11-202ENST00000357207 WNT7AO00755 349 aa16.14■□□□□ 0.17
TRAPPC11-202ENST00000357207 H2AFYO75367 372 aaKnown RBP16.14■□□□□ 0.17
TRAPPC11-202ENST00000357207 EXOC3L1Q86VI1 746 aa16.14■□□□□ 0.17
TRAPPC11-202ENST00000357207 RBM46Q8TBY0 533 aaKnown RBP16.14■□□□□ 0.17
TRAPPC11-202ENST00000357207 FAR2Q96K12 515 aa16.14■□□□□ 0.17
TRAPPC11-202ENST00000357207 COG4Q9H9E3 785 aa16.14■□□□□ 0.17
TRAPPC11-202ENST00000357207 V9GYQ6 96 aa16.14■□□□□ 0.17
TRAPPC11-202ENST00000357207 GAS2O43903 313 aaKnown RBP16.14■□□□□ 0.17
TRAPPC11-202ENST00000357207 CLK1P49759 484 aaKnown RBP16.14■□□□□ 0.17
TRAPPC11-202ENST00000357207 PPATQ06203 517 aa16.14■□□□□ 0.17
TRAPPC11-202ENST00000357207 RNF43Q68DV7 783 aa16.14■□□□□ 0.17
TRAPPC11-202ENST00000357207 MICU2Q8IYU8 434 aa16.14■□□□□ 0.17
TRAPPC11-202ENST00000357207 POU5F2Q8N7G0 328 aa16.14■□□□□ 0.17
TRAPPC11-202ENST00000357207 KYQ8NBH2 561 aa16.14■□□□□ 0.17
TRAPPC11-202ENST00000357207 KAT5Q92993 513 aa16.14■□□□□ 0.17
TRAPPC11-202ENST00000357207 ASIC4Q96FT7 647 aa16.14■□□□□ 0.17
TRAPPC11-202ENST00000357207 ZDHHC15Q96MV8 337 aa16.14■□□□□ 0.17
TRAPPC11-202ENST00000357207 AFF4Q9UHB7 1163 aaKnown RBP16.14■□□□□ 0.17
TRAPPC11-202ENST00000357207 PPLO60437 1756 aa16.13■□□□□ 0.17
TRAPPC11-202ENST00000357207 S100A5P33763 92 aa16.13■□□□□ 0.17
TRAPPC11-202ENST00000357207 GNL1P36915 607 aaPredicted RBP16.13■□□□□ 0.17
TRAPPC11-202ENST00000357207 GLRBP48167 497 aa16.13■□□□□ 0.17
TRAPPC11-202ENST00000357207 CDC42EP1Q00587 391 aa16.13■□□□□ 0.17
TRAPPC11-202ENST00000357207 DDR1Q08345 913 aa16.13■□□□□ 0.17
TRAPPC11-202ENST00000357207 AGAP9Q5VTM2 703 aa16.13■□□□□ 0.17
TRAPPC11-202ENST00000357207 IRF2BP2Q7Z5L9 587 aa16.13■□□□□ 0.17
TRAPPC11-202ENST00000357207 GMCL1P1Q8NEA9 526 aa16.13■□□□□ 0.17
TRAPPC11-202ENST00000357207 LNX1Q8TBB1 728 aaPredicted RBP16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms