RNA–Protein interactions for RNA: ENST00000357162.6

VPS13B-202, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13B, Length 14,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-202ENST00000357162 NIF3L1Q9GZT8 377 aa6.8□□□□□ -1.32
VPS13B-202ENST00000357162 AAR2Q9Y312 384 aaKnown RBP6.8□□□□□ -1.32
VPS13B-202ENST00000357162 NFIBO00712 420 aa6.8□□□□□ -1.32
VPS13B-202ENST00000357162 ERCC2P18074 760 aa6.8□□□□□ -1.32
VPS13B-202ENST00000357162 CDH3P22223 829 aa6.8□□□□□ -1.32
VPS13B-202ENST00000357162 BCAMP50895 628 aa6.8□□□□□ -1.32
VPS13B-202ENST00000357162 SNAP25P60880 206 aa6.8□□□□□ -1.32
VPS13B-202ENST00000357162 ARID5BQ14865 1188 aa6.8□□□□□ -1.32
VPS13B-202ENST00000357162 SLC15A2Q16348 729 aa6.8□□□□□ -1.32
VPS13B-202ENST00000357162 SNRNP35Q16560 246 aaKnown RBP6.8□□□□□ -1.32
VPS13B-202ENST00000357162 RUNDC3AQ59EK9 446 aa6.8□□□□□ -1.32
VPS13B-202ENST00000357162 TSPAN14Q8NG11 270 aa6.8□□□□□ -1.32
VPS13B-202ENST00000357162 C17orf50Q8WW18 174 aa6.8□□□□□ -1.32
VPS13B-202ENST00000357162 HUS1O60921 280 aa6.8□□□□□ -1.32
VPS13B-202ENST00000357162 DNAJC6O75061 913 aa6.8□□□□□ -1.32
VPS13B-202ENST00000357162 BMP10O95393 424 aa6.8□□□□□ -1.32
VPS13B-202ENST00000357162 ALDH18A1P54886 795 aaKnown RBP6.8□□□□□ -1.32
VPS13B-202ENST00000357162 TBL3Q12788 808 aaKnown RBP6.8□□□□□ -1.32
VPS13B-202ENST00000357162 NT5DC4Q86YG4 428 aa6.8□□□□□ -1.32
VPS13B-202ENST00000357162 RTKN2Q8IZC4 609 aa6.8□□□□□ -1.32
VPS13B-202ENST00000357162 TMC2Q8TDI7 906 aa6.8□□□□□ -1.32
VPS13B-202ENST00000357162 CATSPERBQ9H7T0 1116 aa6.8□□□□□ -1.32
VPS13B-202ENST00000357162 DLG5Q8TDM6 1919 aa6.79□□□□□ -1.32
VPS13B-202ENST00000357162 ME2P23368 584 aa6.79□□□□□ -1.32
VPS13B-202ENST00000357162 TRIQKQ629K1 86 aa6.79□□□□□ -1.32
VPS13B-202ENST00000357162 RDH11Q8TC12 318 aa6.79□□□□□ -1.32
VPS13B-202ENST00000357162 CYP3A43Q9HB55 503 aa6.79□□□□□ -1.32
VPS13B-202ENST00000357162 PHTF1Q9UMS5 762 aa6.79□□□□□ -1.32
VPS13B-202ENST00000357162 CARD8Q9Y2G2 431 aa6.79□□□□□ -1.32
VPS13B-202ENST00000357162 INO80B-WBP1J3KQ70 363 aa6.79□□□□□ -1.32
VPS13B-202ENST00000357162 SMIM11AP58511 58 aa6.79□□□□□ -1.32
VPS13B-202ENST00000357162 VPS72Q15906 364 aa6.79□□□□□ -1.32
VPS13B-202ENST00000357162 ADCY4Q8NFM4 1077 aa6.79□□□□□ -1.32
VPS13B-202ENST00000357162 BSNDQ8WZ55 320 aa6.79□□□□□ -1.32
VPS13B-202ENST00000357162 TSPAN18Q96SJ8 248 aa6.79□□□□□ -1.32
VPS13B-202ENST00000357162 CPNE1Q99829 537 aa6.79□□□□□ -1.32
VPS13B-202ENST00000357162 UGT2B28Q9BY64 529 aa6.79□□□□□ -1.32
VPS13B-202ENST00000357162 ARMC7Q9H6L4 198 aa6.79□□□□□ -1.32
VPS13B-202ENST00000357162 CRB1P82279 1406 aa6.79□□□□□ -1.32
VPS13B-202ENST00000357162 MSH3P20585 1137 aa6.79□□□□□ -1.32
VPS13B-202ENST00000357162 IFNGR2P38484 337 aa6.79□□□□□ -1.32
VPS13B-202ENST00000357162 RPL3P39023 403 aaKnown RBP6.79□□□□□ -1.32
VPS13B-202ENST00000357162 EIF2B2P49770 351 aaKnown RBP6.79□□□□□ -1.32
VPS13B-202ENST00000357162 SCARA3Q6AZY7 606 aa6.79□□□□□ -1.32
VPS13B-202ENST00000357162 ATPAF2Q8N5M1 289 aa6.79□□□□□ -1.32
VPS13B-202ENST00000357162 SEPT9Q9UHD8 586 aaPredicted RBP6.79□□□□□ -1.32
VPS13B-202ENST00000357162 WARSP23381 471 aaKnown RBP6.79□□□□□ -1.32
VPS13B-202ENST00000357162 MMP13P45452 471 aa6.79□□□□□ -1.32
VPS13B-202ENST00000357162 PPM1FP49593 454 aaPredicted RBP6.79□□□□□ -1.32
VPS13B-202ENST00000357162 TBX2Q13207 712 aaPredicted RBP6.79□□□□□ -1.32
VPS13B-202ENST00000357162 BLMHQ13867 455 aa6.79□□□□□ -1.32
VPS13B-202ENST00000357162 ZKSCAN4Q969J2 545 aaPredicted RBP6.79□□□□□ -1.32
VPS13B-202ENST00000357162 ZNF333Q96JL9 665 aa6.79□□□□□ -1.32
VPS13B-202ENST00000357162 HEXIM2Q96MH2 286 aaKnown RBP6.79□□□□□ -1.32
VPS13B-202ENST00000357162 IARS2Q9NSE4 1012 aaKnown RBP6.79□□□□□ -1.32
VPS13B-202ENST00000357162 CCNL1Q9UK58 526 aaPredicted RBP6.79□□□□□ -1.32
VPS13B-202ENST00000357162 TEX33O43247 280 aa6.79□□□□□ -1.32
VPS13B-202ENST00000357162 MAPK9P45984 424 aa6.79□□□□□ -1.32
VPS13B-202ENST00000357162 GJA8P48165 433 aa6.79□□□□□ -1.32
VPS13B-202ENST00000357162 ITKQ08881 620 aa6.79□□□□□ -1.32
VPS13B-202ENST00000357162 TRIP4Q15650 581 aaPredicted RBP6.79□□□□□ -1.32
VPS13B-202ENST00000357162 MRNIPQ6NTE8 343 aa6.79□□□□□ -1.32
VPS13B-202ENST00000357162 MZT2BQ6NZ67 158 aa6.79□□□□□ -1.32
VPS13B-202ENST00000357162 CAPN12Q6ZSI9 719 aa6.79□□□□□ -1.32
VPS13B-202ENST00000357162 ARID3BQ8IVW6 561 aaPredicted RBP6.79□□□□□ -1.32
VPS13B-202ENST00000357162 AVENQ9NQS1 362 aaPredicted RBP6.79□□□□□ -1.32
VPS13B-202ENST00000357162 OPLAHO14841 1288 aa6.79□□□□□ -1.32
VPS13B-202ENST00000357162 ECDO95905 644 aaPredicted RBP6.79□□□□□ -1.32
VPS13B-202ENST00000357162 CD4P01730 458 aa6.79□□□□□ -1.32
VPS13B-202ENST00000357162 PDGFRBP09619 1106 aa6.79□□□□□ -1.32
VPS13B-202ENST00000357162 MGAT5Q09328 741 aa6.79□□□□□ -1.32
VPS13B-202ENST00000357162 DCP1AQ9NPI6 582 aaPredicted RBP6.79□□□□□ -1.32
VPS13B-202ENST00000357162 ADGRB2O60241 1585 aa6.79□□□□□ -1.32
VPS13B-202ENST00000357162 SKAP2O75563 359 aaPredicted RBP6.79□□□□□ -1.32
VPS13B-202ENST00000357162 TSPAN9O75954 239 aa6.79□□□□□ -1.32
VPS13B-202ENST00000357162 ITGA8P53708 1063 aa6.79□□□□□ -1.32
VPS13B-202ENST00000357162 SUPT20HL1Q3ZLR7 823 aa6.79□□□□□ -1.32
VPS13B-202ENST00000357162 NAIF1Q69YI7 327 aaPredicted RBP6.79□□□□□ -1.32
VPS13B-202ENST00000357162 AGR3Q8TD06 166 aa6.79□□□□□ -1.32
VPS13B-202ENST00000357162 JPH1Q9HDC5 661 aaPredicted RBP6.79□□□□□ -1.32
VPS13B-202ENST00000357162 PCDHA10Q9Y5I2 948 aa6.79□□□□□ -1.32
VPS13B-202ENST00000357162 FAM95CA0A1B0GW59 222 aa6.79□□□□□ -1.32
VPS13B-202ENST00000357162 KRT34O76011 436 aa6.79□□□□□ -1.32
VPS13B-202ENST00000357162 OCM2P0CE71 109 aa6.79□□□□□ -1.32
VPS13B-202ENST00000357162 OCMP0CE72 109 aaPredicted RBP6.79□□□□□ -1.32
VPS13B-202ENST00000357162 ACLYP53396 1101 aa6.79□□□□□ -1.32
VPS13B-202ENST00000357162 MYLK4Q86YV6 388 aaPredicted RBP6.79□□□□□ -1.32
VPS13B-202ENST00000357162 RAB2BQ8WUD1 216 aa6.79□□□□□ -1.32
VPS13B-202ENST00000357162 PIGSQ96S52 555 aa6.79□□□□□ -1.32
VPS13B-202ENST00000357162 CKAP5Q14008 2032 aa6.79□□□□□ -1.32
VPS13B-202ENST00000357162 SPDYE16A6NNV3 312 aaPredicted RBP6.79□□□□□ -1.32
VPS13B-202ENST00000357162 HIST1H2AGP0C0S8 130 aaPredicted RBP6.79□□□□□ -1.32
VPS13B-202ENST00000357162 HIST1H2ADP20671 130 aa6.79□□□□□ -1.32
VPS13B-202ENST00000357162 SPDYE2Q495Y8 402 aa6.79□□□□□ -1.32
VPS13B-202ENST00000357162 RAD9BQ6WBX8 426 aa6.79□□□□□ -1.32
VPS13B-202ENST00000357162 CYP4Z1Q86W10 505 aa6.79□□□□□ -1.32
VPS13B-202ENST00000357162 PTCD3Q96EY7 689 aaKnown RBP6.79□□□□□ -1.32
VPS13B-202ENST00000357162 HIST1H2AHQ96KK5 128 aa6.79□□□□□ -1.32
VPS13B-202ENST00000357162 HIST1H2AJQ99878 128 aa6.79□□□□□ -1.32
VPS13B-202ENST00000357162 H2AFJQ9BTM1 129 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms