RNA–Protein interactions for RNA: ENST00000354291.8

DDX55-202, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 1,004 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-202ENST00000354291 PDE6CP51160 858 aa16.98■□□□□ 0.31
DDX55-202ENST00000354291 SV2CQ496J9 727 aa16.98■□□□□ 0.31
DDX55-202ENST00000354291 SYCP2LQ5T4T6 812 aa16.98■□□□□ 0.31
DDX55-202ENST00000354291 ZNF605Q86T29 641 aa16.98■□□□□ 0.31
DDX55-202ENST00000354291 SPATA2LQ8IUW3 424 aaPredicted RBP16.98■□□□□ 0.31
DDX55-202ENST00000354291 PDCL2Q8N4E4 241 aa16.98■□□□□ 0.31
DDX55-202ENST00000354291 PIP4K2CQ8TBX8 421 aa16.98■□□□□ 0.31
DDX55-202ENST00000354291 PLIN2Q99541 437 aa16.98■□□□□ 0.31
DDX55-202ENST00000354291 ACBD6Q9BR61 282 aa16.98■□□□□ 0.31
DDX55-202ENST00000354291 CCSER1Q9C0I3 900 aa16.98■□□□□ 0.31
DDX55-202ENST00000354291 ASB7Q9H672 318 aa16.98■□□□□ 0.31
DDX55-202ENST00000354291 PRDM16Q9HAZ2 1276 aa16.98■□□□□ 0.31
DDX55-202ENST00000354291 ABCB6Q9NP58 842 aa16.98■□□□□ 0.31
DDX55-202ENST00000354291 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.98■□□□□ 0.31
DDX55-202ENST00000354291 KIAA1522Q9P206 1035 aaPredicted RBP16.98■□□□□ 0.31
DDX55-202ENST00000354291 LARSQ9P2J5 1176 aaKnown RBP16.98■□□□□ 0.31
DDX55-202ENST00000354291 PCDH15Q96QU1 1955 aa16.98■□□□□ 0.31
DDX55-202ENST00000354291 CFAP46Q8IYW2 2715 aa16.97■□□□□ 0.31
DDX55-202ENST00000354291 A0A087WV48 116 aa16.97■□□□□ 0.31
DDX55-202ENST00000354291 H3BQV1 296 aa16.97■□□□□ 0.31
DDX55-202ENST00000354291 SLC9A3R1O14745 358 aaPredicted RBP16.97■□□□□ 0.31
DDX55-202ENST00000354291 CBFA2T3O75081 653 aa16.97■□□□□ 0.31
DDX55-202ENST00000354291 ADH1CP00326 375 aa16.97■□□□□ 0.31
DDX55-202ENST00000354291 ABL1P00519 1130 aa16.97■□□□□ 0.31
DDX55-202ENST00000354291 PLA2G2AP14555 144 aa16.97■□□□□ 0.31
DDX55-202ENST00000354291 EIF2DP41214 584 aaKnown RBP16.97■□□□□ 0.31
DDX55-202ENST00000354291 NCKAP1LP55160 1127 aa16.97■□□□□ 0.31
DDX55-202ENST00000354291 GRIK2Q13002 908 aa16.97■□□□□ 0.31
DDX55-202ENST00000354291 CCDC142Q17RM4 750 aa16.97■□□□□ 0.31
DDX55-202ENST00000354291 GLRX5Q86SX6 157 aa16.97■□□□□ 0.31
DDX55-202ENST00000354291 SCUBE3Q8IX30 993 aa16.97■□□□□ 0.31
DDX55-202ENST00000354291 ZNF513Q8N8E2 541 aaPredicted RBP16.97■□□□□ 0.31
DDX55-202ENST00000354291 NAT16Q8N8M0 369 aa16.97■□□□□ 0.31
DDX55-202ENST00000354291 LEO1Q8WVC0 666 aaPredicted RBP16.97■□□□□ 0.31
DDX55-202ENST00000354291 RNF38Q9H0F5 515 aa16.97■□□□□ 0.31
DDX55-202ENST00000354291 TRPM5Q9NZQ8 1165 aa16.97■□□□□ 0.31
DDX55-202ENST00000354291 SUSD2Q9UGT4 822 aa16.97■□□□□ 0.31
DDX55-202ENST00000354291 C2CD2Q9Y426 696 aa16.97■□□□□ 0.31
DDX55-202ENST00000354291 CPQQ9Y646 472 aa16.97■□□□□ 0.31
DDX55-202ENST00000354291 OBSL1O75147 1896 aa16.97■□□□□ 0.31
DDX55-202ENST00000354291 SHROOM3Q8TF72 1996 aa16.97■□□□□ 0.31
DDX55-202ENST00000354291 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.96■□□□□ 0.31
DDX55-202ENST00000354291 TK2O00142 265 aa16.96■□□□□ 0.31
DDX55-202ENST00000354291 ZNF217O75362 1048 aa16.96■□□□□ 0.31
DDX55-202ENST00000354291 ATXN1LP0C7T5 689 aaKnown RBP16.96■□□□□ 0.31
DDX55-202ENST00000354291 ADH5P11766 374 aa16.96■□□□□ 0.31
DDX55-202ENST00000354291 HOXB2P14652 356 aa16.96■□□□□ 0.31
DDX55-202ENST00000354291 GJB2P29033 226 aa16.96■□□□□ 0.31
DDX55-202ENST00000354291 ABCG1P45844 678 aa16.96■□□□□ 0.31
DDX55-202ENST00000354291 MYL7Q01449 175 aa16.96■□□□□ 0.31
DDX55-202ENST00000354291 INTS6LQ5JSJ4 861 aaKnown RBP16.96■□□□□ 0.31
DDX55-202ENST00000354291 TRMT11Q7Z4G4 463 aaKnown RBP16.96■□□□□ 0.31
DDX55-202ENST00000354291 KCTD17Q8N5Z5 321 aa16.96■□□□□ 0.31
DDX55-202ENST00000354291 SYT2Q8N9I0 419 aaPredicted RBP16.96■□□□□ 0.31
DDX55-202ENST00000354291 ZNF419Q96HQ0 510 aaPredicted RBP16.96■□□□□ 0.31
DDX55-202ENST00000354291 MMTAG2Q9BU76 263 aaKnown RBP16.96■□□□□ 0.31
DDX55-202ENST00000354291 CFAP97Q9P2B7 532 aa16.96■□□□□ 0.31
DDX55-202ENST00000354291 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.96■□□□□ 0.31
DDX55-202ENST00000354291 CEP192Q8TEP8 1941 aa16.96■□□□□ 0.3
DDX55-202ENST00000354291 TSC2P49815 1807 aa16.96■□□□□ 0.3
DDX55-202ENST00000354291 MYOFQ9NZM1 2061 aa16.95■□□□□ 0.3
DDX55-202ENST00000354291 FAM149AA5PLN7 773 aa16.95■□□□□ 0.3
DDX55-202ENST00000354291 HUS1O60921 280 aa16.95■□□□□ 0.3
DDX55-202ENST00000354291 IL17AQ16552 155 aa16.95■□□□□ 0.3
DDX55-202ENST00000354291 WDR45BQ5MNZ6 344 aa16.95■□□□□ 0.3
DDX55-202ENST00000354291 LY6G5CQ5SRR4 150 aa16.95■□□□□ 0.3
DDX55-202ENST00000354291 ADALQ6DHV7 355 aa16.95■□□□□ 0.3
DDX55-202ENST00000354291 SLC39A4Q6P5W5 647 aa16.95■□□□□ 0.3
DDX55-202ENST00000354291 ZDHHC5Q9C0B5 715 aa16.95■□□□□ 0.3
DDX55-202ENST00000354291 IL21RQ9HBE5 538 aa16.95■□□□□ 0.3
DDX55-202ENST00000354291 L1RE1Q9UN81 338 aa16.95■□□□□ 0.3
DDX55-202ENST00000354291 SMC3Q9UQE7 1217 aa16.95■□□□□ 0.3
DDX55-202ENST00000354291 K7ENM7 598 aa16.94■□□□□ 0.3
DDX55-202ENST00000354291 HCRTO43612 131 aa16.94■□□□□ 0.3
DDX55-202ENST00000354291 CD2BP2O95400 341 aaKnown RBP16.94■□□□□ 0.3
DDX55-202ENST00000354291 PIGRP01833 764 aa16.94■□□□□ 0.3
DDX55-202ENST00000354291 PLA2G4BP0C869 781 aa16.94■□□□□ 0.3
DDX55-202ENST00000354291 NTSR1P30989 418 aa16.94■□□□□ 0.3
DDX55-202ENST00000354291 SLC7A9P82251 487 aa16.94■□□□□ 0.3
DDX55-202ENST00000354291 CFAP221Q4G0U5 840 aa16.94■□□□□ 0.3
DDX55-202ENST00000354291 CCDC157Q569K6 752 aa16.94■□□□□ 0.3
DDX55-202ENST00000354291 C10orf76Q5T2E6 689 aa16.94■□□□□ 0.3
DDX55-202ENST00000354291 BTBD8Q5XKL5 378 aa16.94■□□□□ 0.3
DDX55-202ENST00000354291 ARL6IP4Q66PJ3 421 aaKnown RBP16.94■□□□□ 0.3
DDX55-202ENST00000354291 MYCT1Q8N699 235 aa16.94■□□□□ 0.3
DDX55-202ENST00000354291 KCNV2Q8TDN2 545 aa16.94■□□□□ 0.3
DDX55-202ENST00000354291 RHBDD1Q8TEB9 315 aa16.94■□□□□ 0.3
DDX55-202ENST00000354291 FOXJ1Q92949 421 aa16.94■□□□□ 0.3
DDX55-202ENST00000354291 ZNF560Q96MR9 790 aa16.94■□□□□ 0.3
DDX55-202ENST00000354291 PKMYT1Q99640 499 aa16.94■□□□□ 0.3
DDX55-202ENST00000354291 GAREM1Q9H706 876 aa16.94■□□□□ 0.3
DDX55-202ENST00000354291 AGAP1Q9UPQ3 857 aa16.94■□□□□ 0.3
DDX55-202ENST00000354291 RAI2Q9Y5P3 530 aa16.94■□□□□ 0.3
DDX55-202ENST00000354291 KNL1Q8NG31 2342 aa16.93■□□□□ 0.3
DDX55-202ENST00000354291 PTPRBP23467 1997 aa16.93■□□□□ 0.3
DDX55-202ENST00000354291 KNTC1P50748 2209 aa16.93■□□□□ 0.3
DDX55-202ENST00000354291 A0A1W2PQF6 199 aa16.93■□□□□ 0.3
DDX55-202ENST00000354291 ANKRD63C9JTQ0 380 aa16.93■□□□□ 0.3
DDX55-202ENST00000354291 ATXN7O15265 892 aaPredicted RBP16.93■□□□□ 0.3
DDX55-202ENST00000354291 PFKLP17858 780 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms