RNA–Protein interactions for RNA: ENST00000353909.7

MBD1-205, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene MBD1, Length 2,820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-205ENST00000353909 C17orf99Q6UX52 265 aa16.29■□□□□ 0.2
MBD1-205ENST00000353909 BBOF1Q8ND07 529 aa16.29■□□□□ 0.2
MBD1-205ENST00000353909 ZFP42Q96MM3 310 aa16.29■□□□□ 0.2
MBD1-205ENST00000353909 ROPN1BQ9BZX4 212 aaPredicted RBP16.29■□□□□ 0.2
MBD1-205ENST00000353909 ROPN1Q9HAT0 212 aaPredicted RBP16.29■□□□□ 0.2
MBD1-205ENST00000353909 MLXIPLQ9NP71 852 aa16.29■□□□□ 0.2
MBD1-205ENST00000353909 KIAA1257Q9ULG3 409 aa16.29■□□□□ 0.2
MBD1-205ENST00000353909 DERAQ9Y315 318 aa16.29■□□□□ 0.2
MBD1-205ENST00000353909 ZNF236Q9UL36 1845 aa16.29■□□□□ 0.2
MBD1-205ENST00000353909 TCRBV7S3A2A0A539 114 aa16.29■□□□□ 0.2
MBD1-205ENST00000353909 PIRO00625 290 aa16.29■□□□□ 0.2
MBD1-205ENST00000353909 PIAS1O75925 651 aa16.29■□□□□ 0.2
MBD1-205ENST00000353909 IFNAR2P48551 515 aa16.29■□□□□ 0.2
MBD1-205ENST00000353909 CA9Q16790 459 aa16.29■□□□□ 0.2
MBD1-205ENST00000353909 SYCP2LQ5T4T6 812 aa16.29■□□□□ 0.2
MBD1-205ENST00000353909 ZC3H18Q86VM9 953 aaKnown RBP16.29■□□□□ 0.2
MBD1-205ENST00000353909 FAM71DQ8N9W8 422 aa16.29■□□□□ 0.2
MBD1-205ENST00000353909 SLC4A5Q9BY07 1137 aa16.29■□□□□ 0.2
MBD1-205ENST00000353909 CNOT10Q9H9A5 744 aaKnown RBP16.29■□□□□ 0.2
MBD1-205ENST00000353909 AFF1P51825 1210 aaKnown RBP16.28■□□□□ 0.2
MBD1-205ENST00000353909 MPP2Q14168 576 aa16.28■□□□□ 0.2
MBD1-205ENST00000353909 CCDC13Q8IYE1 715 aa16.28■□□□□ 0.2
MBD1-205ENST00000353909 LRRC52Q8N7C0 313 aa16.28■□□□□ 0.2
MBD1-205ENST00000353909 SMG8Q8ND04 991 aaKnown RBP16.28■□□□□ 0.2
MBD1-205ENST00000353909 PRMT1Q99873 361 aaKnown RBP16.28■□□□□ 0.2
MBD1-205ENST00000353909 TSPYL1Q9H0U9 437 aa16.28■□□□□ 0.2
MBD1-205ENST00000353909 PCDH9Q9HC56 1237 aa16.28■□□□□ 0.2
MBD1-205ENST00000353909 UBQLN1Q9UMX0 589 aaKnown RBP16.28■□□□□ 0.2
MBD1-205ENST00000353909 EFR3BQ9Y2G0 817 aa16.28■□□□□ 0.2
MBD1-205ENST00000353909 IPPQ9Y573 584 aa16.28■□□□□ 0.2
MBD1-205ENST00000353909 KPNA7A9QM74 516 aa16.28■□□□□ 0.2
MBD1-205ENST00000353909 IL4RP24394 825 aa16.28■□□□□ 0.2
MBD1-205ENST00000353909 RPL22P35268 128 aaKnown RBP16.28■□□□□ 0.2
MBD1-205ENST00000353909 PCK1P35558 622 aa16.28■□□□□ 0.2
MBD1-205ENST00000353909 CTCFP49711 727 aaPredicted RBP16.28■□□□□ 0.2
MBD1-205ENST00000353909 CPT1AP50416 773 aa16.28■□□□□ 0.2
MBD1-205ENST00000353909 DPYSL3Q14195 570 aa16.28■□□□□ 0.2
MBD1-205ENST00000353909 FSCN1Q16658 493 aaKnown RBP16.28■□□□□ 0.2
MBD1-205ENST00000353909 MSS51Q4VC12 460 aa16.28■□□□□ 0.2
MBD1-205ENST00000353909 TMEM110Q86TL2 294 aa16.28■□□□□ 0.2
MBD1-205ENST00000353909 SPATA18Q8TC71 538 aa16.28■□□□□ 0.2
MBD1-205ENST00000353909 MGARPQ8TDB4 240 aa16.28■□□□□ 0.2
MBD1-205ENST00000353909 FAM172AQ8WUF8 416 aa16.28■□□□□ 0.2
MBD1-205ENST00000353909 PRCCQ92733 491 aaPredicted RBP16.28■□□□□ 0.2
MBD1-205ENST00000353909 SERPINB12Q96P63 405 aa16.28■□□□□ 0.2
MBD1-205ENST00000353909 NAALADL1Q9UQQ1 740 aa16.28■□□□□ 0.2
MBD1-205ENST00000353909 PDCD11Q14690 1871 aaKnown RBP16.28■□□□□ 0.2
MBD1-205ENST00000353909 ATP2C2O75185 946 aa16.27■□□□□ 0.2
MBD1-205ENST00000353909 RBP3P10745 1247 aa16.27■□□□□ 0.2
MBD1-205ENST00000353909 PURAQ00577 322 aaKnown RBP16.27■□□□□ 0.2
MBD1-205ENST00000353909 ANKMY2Q8IV38 441 aa16.27■□□□□ 0.2
MBD1-205ENST00000353909 ZBED8Q8IZ13 594 aa16.27■□□□□ 0.2
MBD1-205ENST00000353909 TRPV1Q8NER1 839 aa16.27■□□□□ 0.2
MBD1-205ENST00000353909 CPT1BQ92523 772 aa16.27■□□□□ 0.2
MBD1-205ENST00000353909 NDRG1Q92597 394 aaKnown RBP16.27■□□□□ 0.2
MBD1-205ENST00000353909 AP5M1Q9H0R1 490 aa16.27■□□□□ 0.2
MBD1-205ENST00000353909 APOC4-APOC2K7ER74 178 aa16.27■□□□□ 0.2
MBD1-205ENST00000353909 ENDOD1O94919 500 aa16.27■□□□□ 0.2
MBD1-205ENST00000353909 APOC2P02655 101 aa16.27■□□□□ 0.2
MBD1-205ENST00000353909 EIF3EP60228 445 aaKnown RBP16.27■□□□□ 0.2
MBD1-205ENST00000353909 CDC42EP1Q00587 391 aa16.27■□□□□ 0.2
MBD1-205ENST00000353909 SLC6A3Q01959 620 aa16.27■□□□□ 0.2
MBD1-205ENST00000353909 C1orf228Q6PIY5 440 aa16.27■□□□□ 0.2
MBD1-205ENST00000353909 VSTM1Q6UX27 236 aa16.27■□□□□ 0.2
MBD1-205ENST00000353909 RELL1Q8IUW5 271 aa16.27■□□□□ 0.2
MBD1-205ENST00000353909 WNT8BQ93098 351 aa16.27■□□□□ 0.2
MBD1-205ENST00000353909 MRRFQ96E11 262 aaKnown RBP16.27■□□□□ 0.2
MBD1-205ENST00000353909 INTS9Q9NV88 658 aaKnown RBP16.27■□□□□ 0.2
MBD1-205ENST00000353909 HESX1Q9UBX0 185 aa16.27■□□□□ 0.2
MBD1-205ENST00000353909 DDX20Q9UHI6 824 aaKnown RBP16.27■□□□□ 0.2
MBD1-205ENST00000353909 FARP1Q9Y4F1 1045 aaPredicted RBP16.27■□□□□ 0.2
MBD1-205ENST00000353909 C17orf102A2RUQ5 167 aa16.27■□□□□ 0.19
MBD1-205ENST00000353909 PRPSAP2O60256 369 aa16.27■□□□□ 0.19
MBD1-205ENST00000353909 C6orf222P0C671 652 aaPredicted RBP16.27■□□□□ 0.19
MBD1-205ENST00000353909 LCP1P13796 627 aa16.27■□□□□ 0.19
MBD1-205ENST00000353909 GCAP28676 217 aa16.27■□□□□ 0.19
MBD1-205ENST00000353909 GNL1P36915 607 aaPredicted RBP16.27■□□□□ 0.19
MBD1-205ENST00000353909 CORO7P57737 925 aa16.27■□□□□ 0.19
MBD1-205ENST00000353909 ACAP1Q15027 740 aa16.27■□□□□ 0.19
MBD1-205ENST00000353909 SMYD5Q6GMV2 418 aa16.27■□□□□ 0.19
MBD1-205ENST00000353909 TTC39CQ8N584 583 aa16.27■□□□□ 0.19
MBD1-205ENST00000353909 CCHCR1Q8TD31 782 aa16.27■□□□□ 0.19
MBD1-205ENST00000353909 SLC2A14Q8TDB8 520 aa16.27■□□□□ 0.19
MBD1-205ENST00000353909 RSAD2Q8WXG1 361 aa16.27■□□□□ 0.19
MBD1-205ENST00000353909 ZNF317Q96PQ6 595 aaPredicted RBP16.27■□□□□ 0.19
MBD1-205ENST00000353909 ZIC5Q96T25 663 aa16.27■□□□□ 0.19
MBD1-205ENST00000353909 OSBPL7Q9BZF2 842 aa16.27■□□□□ 0.19
MBD1-205ENST00000353909 TMEM120BA0PK00 339 aa16.26■□□□□ 0.19
MBD1-205ENST00000353909 TNPO2O14787 897 aaKnown RBP16.26■□□□□ 0.19
MBD1-205ENST00000353909 TKTP29401 623 aaKnown RBP16.26■□□□□ 0.19
MBD1-205ENST00000353909 HDAC4P56524 1084 aa16.26■□□□□ 0.19
MBD1-205ENST00000353909 PDIA2Q13087 525 aaKnown RBP16.26■□□□□ 0.19
MBD1-205ENST00000353909 MORF4L2Q15014 288 aa16.26■□□□□ 0.19
MBD1-205ENST00000353909 FNBP1LQ5T0N5 605 aa16.26■□□□□ 0.19
MBD1-205ENST00000353909 TWF2Q6IBS0 349 aaKnown RBP16.26■□□□□ 0.19
MBD1-205ENST00000353909 FAM228AQ86W67 206 aa16.26■□□□□ 0.19
MBD1-205ENST00000353909 IFNL1Q8IU54 200 aa16.26■□□□□ 0.19
MBD1-205ENST00000353909 WDR83Q9BRX9 315 aaKnown RBP16.26■□□□□ 0.19
MBD1-205ENST00000353909 PTGESO14684 152 aa16.26■□□□□ 0.19
MBD1-205ENST00000353909 TMEM63AO94886 807 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms