RNA–Protein interactions for RNA: ENST00000351677.6

PTPN11-201, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPN11, Length 6,101 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-201ENST00000351677 LSM8O95777 96 aaKnown RBP16.59■□□□□ 0.25
PTPN11-201ENST00000351677 PYGLP06737 847 aa16.59■□□□□ 0.25
PTPN11-201ENST00000351677 GLRBP48167 497 aa16.59■□□□□ 0.25
PTPN11-201ENST00000351677 DYNC1I2Q13409 638 aaKnown RBP16.59■□□□□ 0.25
PTPN11-201ENST00000351677 COL9A3Q14050 684 aaPredicted RBP16.59■□□□□ 0.25
PTPN11-201ENST00000351677 PRUNE1Q86TP1 453 aa16.59■□□□□ 0.25
PTPN11-201ENST00000351677 BLOC1S5Q8TDH9 187 aa16.59■□□□□ 0.25
PTPN11-201ENST00000351677 COL5A2P05997 1499 aaPredicted RBP16.59■□□□□ 0.25
PTPN11-201ENST00000351677 GLRA3O75311 464 aa16.59■□□□□ 0.25
PTPN11-201ENST00000351677 RPL21P46778 160 aaKnown RBP16.59■□□□□ 0.25
PTPN11-201ENST00000351677 MTMR9Q96QG7 549 aa16.59■□□□□ 0.25
PTPN11-201ENST00000351677 MCL1Q07820 350 aa16.59■□□□□ 0.25
PTPN11-201ENST00000351677 PTK2BQ14289 1009 aa16.59■□□□□ 0.25
PTPN11-201ENST00000351677 SAMD3Q8N6K7 520 aa16.59■□□□□ 0.25
PTPN11-201ENST00000351677 RAB21Q9UL25 225 aa16.59■□□□□ 0.25
PTPN11-201ENST00000351677 ALDH1A1P00352 501 aa16.59■□□□□ 0.25
PTPN11-201ENST00000351677 SERPIND1P05546 499 aa16.59■□□□□ 0.25
PTPN11-201ENST00000351677 BMP6P22004 513 aa16.59■□□□□ 0.25
PTPN11-201ENST00000351677 CSE1LP55060 971 aaKnown RBP16.59■□□□□ 0.25
PTPN11-201ENST00000351677 FLOT2Q14254 428 aa16.59■□□□□ 0.25
PTPN11-201ENST00000351677 DCLK3Q9C098 648 aa16.59■□□□□ 0.25
PTPN11-201ENST00000351677 ILKAPQ9H0C8 392 aaPredicted RBP16.59■□□□□ 0.25
PTPN11-201ENST00000351677 IARS2Q9NSE4 1012 aaKnown RBP16.59■□□□□ 0.25
PTPN11-201ENST00000351677 PKD2L2Q9NZM6 624 aa16.59■□□□□ 0.25
PTPN11-201ENST00000351677 RUVBL2Q9Y230 463 aaKnown RBP16.59■□□□□ 0.25
PTPN11-201ENST00000351677 PJA2O43164 708 aa16.58■□□□□ 0.25
PTPN11-201ENST00000351677 RIPK2O43353 540 aa16.58■□□□□ 0.25
PTPN11-201ENST00000351677 MAPTP10636 758 aaKnown RBP16.58■□□□□ 0.25
PTPN11-201ENST00000351677 SERPINB5P36952 375 aa16.58■□□□□ 0.25
PTPN11-201ENST00000351677 BCAT1P54687 386 aa16.58■□□□□ 0.25
PTPN11-201ENST00000351677 FAM83EQ2M2I3 478 aa16.58■□□□□ 0.25
PTPN11-201ENST00000351677 DAB2IPQ5VWQ8 1189 aa16.58■□□□□ 0.25
PTPN11-201ENST00000351677 BTNL9Q6UXG8 535 aa16.58■□□□□ 0.25
PTPN11-201ENST00000351677 SNX31Q8N9S9 440 aa16.58■□□□□ 0.25
PTPN11-201ENST00000351677 HASPINQ8TF76 798 aa16.58■□□□□ 0.25
PTPN11-201ENST00000351677 ZNF606Q8WXB4 792 aa16.58■□□□□ 0.25
PTPN11-201ENST00000351677 CHCHD3Q9NX63 227 aaKnown RBP16.58■□□□□ 0.25
PTPN11-201ENST00000351677 NAALADL1Q9UQQ1 740 aa16.58■□□□□ 0.25
PTPN11-201ENST00000351677 ZBTB17Q13105 803 aa16.58■□□□□ 0.25
PTPN11-201ENST00000351677 MEA1Q16626 185 aa16.58■□□□□ 0.25
PTPN11-201ENST00000351677 METTL7BQ6UX53 244 aa16.58■□□□□ 0.25
PTPN11-201ENST00000351677 DEFB132Q7Z7B7 95 aa16.58■□□□□ 0.25
PTPN11-201ENST00000351677 MIB1Q86YT6 1006 aa16.58■□□□□ 0.25
PTPN11-201ENST00000351677 CD302Q8IX05 232 aa16.58■□□□□ 0.25
PTPN11-201ENST00000351677 C3orf20Q8ND61 904 aa16.58■□□□□ 0.25
PTPN11-201ENST00000351677 PPATQ06203 517 aa16.58■□□□□ 0.24
PTPN11-201ENST00000351677 BMPR2Q13873 1038 aa16.58■□□□□ 0.24
PTPN11-201ENST00000351677 NT5DC3Q86UY8 548 aa16.58■□□□□ 0.24
PTPN11-201ENST00000351677 SLITRK1Q96PX8 696 aa16.58■□□□□ 0.24
PTPN11-201ENST00000351677 GPBP1L1Q9HC44 474 aaPredicted RBP16.58■□□□□ 0.24
PTPN11-201ENST00000351677 VWA5AO00534 786 aa16.58■□□□□ 0.24
PTPN11-201ENST00000351677 CASP5P51878 434 aa16.58■□□□□ 0.24
PTPN11-201ENST00000351677 RCN1Q15293 331 aa16.58■□□□□ 0.24
PTPN11-201ENST00000351677 ERO1BQ86YB8 467 aa16.58■□□□□ 0.24
PTPN11-201ENST00000351677 TAGAPQ8N103 731 aa16.58■□□□□ 0.24
PTPN11-201ENST00000351677 RPRD1AQ96P16 312 aaPredicted RBP16.58■□□□□ 0.24
PTPN11-201ENST00000351677 DCDC2Q9UHG0 476 aa16.58■□□□□ 0.24
PTPN11-201ENST00000351677 MYO1GB0I1T2 1018 aa16.58■□□□□ 0.24
PTPN11-201ENST00000351677 PIK3CDO00329 1044 aa16.58■□□□□ 0.24
PTPN11-201ENST00000351677 ATICP31939 592 aa16.58■□□□□ 0.24
PTPN11-201ENST00000351677 HDAC4P56524 1084 aa16.58■□□□□ 0.24
PTPN11-201ENST00000351677 CREG2Q8IUH2 290 aa16.58■□□□□ 0.24
PTPN11-201ENST00000351677 ZSWIM2Q8NEG5 633 aa16.58■□□□□ 0.24
PTPN11-201ENST00000351677 FRMPD4Q14CM0 1322 aa16.58■□□□□ 0.24
PTPN11-201ENST00000351677 RARAP10276 462 aa16.57■□□□□ 0.24
PTPN11-201ENST00000351677 CNPY4Q8N129 248 aa16.57■□□□□ 0.24
PTPN11-201ENST00000351677 FAM136AQ96C01 138 aa16.57■□□□□ 0.24
PTPN11-201ENST00000351677 GJB6O95452 261 aa16.57■□□□□ 0.24
PTPN11-201ENST00000351677 BGNP21810 368 aa16.57■□□□□ 0.24
PTPN11-201ENST00000351677 C1QBPQ07021 282 aaKnown RBP16.57■□□□□ 0.24
PTPN11-201ENST00000351677 TMC3Q7Z5M5 1100 aa16.57■□□□□ 0.24
PTPN11-201ENST00000351677 ZNF555Q8NEP9 628 aa16.57■□□□□ 0.24
PTPN11-201ENST00000351677 OSMRQ99650 979 aa16.57■□□□□ 0.24
PTPN11-201ENST00000351677 CINPQ9BW66 212 aaPredicted RBP16.57■□□□□ 0.24
PTPN11-201ENST00000351677 TEX12Q9BXU0 123 aa16.57■□□□□ 0.24
PTPN11-201ENST00000351677 SIK3Q9Y2K2 1263 aa16.57■□□□□ 0.24
PTPN11-201ENST00000351677 SH3BP1Q9Y3L3 701 aa16.57■□□□□ 0.24
PTPN11-201ENST00000351677 TDRD10Q5VZ19 366 aaKnown RBP16.57■□□□□ 0.24
PTPN11-201ENST00000351677 MTDHQ86UE4 582 aaKnown RBP16.57■□□□□ 0.24
PTPN11-201ENST00000351677 C17orf80Q9BSJ5 609 aa16.57■□□□□ 0.24
PTPN11-201ENST00000351677 CHST12Q9NRB3 414 aa16.57■□□□□ 0.24
PTPN11-201ENST00000351677 DSG3P32926 999 aa16.57■□□□□ 0.24
PTPN11-201ENST00000351677 GEMP55040 296 aa16.57■□□□□ 0.24
PTPN11-201ENST00000351677 KCNK10P57789 538 aa16.57■□□□□ 0.24
PTPN11-201ENST00000351677 ARHGEF7Q14155 803 aa16.57■□□□□ 0.24
PTPN11-201ENST00000351677 IL17AQ16552 155 aa16.57■□□□□ 0.24
PTPN11-201ENST00000351677 KIRREL3Q8IZU9 778 aa16.57■□□□□ 0.24
PTPN11-201ENST00000351677 ZBTB45Q96K62 511 aaPredicted RBP16.57■□□□□ 0.24
PTPN11-201ENST00000351677 PCDHB7Q9Y5E2 793 aa16.57■□□□□ 0.24
PTPN11-201ENST00000351677 ENO4A6NNW6 628 aa16.57■□□□□ 0.24
PTPN11-201ENST00000351677 SUPT7LO94864 414 aa16.57■□□□□ 0.24
PTPN11-201ENST00000351677 PPP3CCP48454 512 aa16.57■□□□□ 0.24
PTPN11-201ENST00000351677 GCLCP48506 637 aaPredicted RBP16.57■□□□□ 0.24
PTPN11-201ENST00000351677 KRT72Q14CN4 511 aa16.57■□□□□ 0.24
PTPN11-201ENST00000351677 ATP6V0D2Q8N8Y2 350 aa16.57■□□□□ 0.24
PTPN11-201ENST00000351677 CEP41Q9BYV8 373 aa16.57■□□□□ 0.24
PTPN11-201ENST00000351677 KIAA1683Q9H0B3 1180 aa16.57■□□□□ 0.24
PTPN11-201ENST00000351677 MROH8Q9H579 483 aa16.57■□□□□ 0.24
PTPN11-201ENST00000351677 SNTG2Q9NY99 539 aa16.57■□□□□ 0.24
PTPN11-201ENST00000351677 UBP1Q9NZI7 540 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms