RNA–Protein interactions for RNA: ENST00000349703.6

RFC1-201, Transcript of replication factor C subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RFC1, Length 4,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-201ENST00000349703 ZNF844Q08AG5 666 aa6.23□□□□□ -1.41
RFC1-201ENST00000349703 ORC2Q13416 577 aaPredicted RBP6.23□□□□□ -1.41
RFC1-201ENST00000349703 ARHGEF7Q14155 803 aa6.23□□□□□ -1.41
RFC1-201ENST00000349703 SPARCL1Q14515 664 aa6.23□□□□□ -1.41
RFC1-201ENST00000349703 GRIN2CQ14957 1233 aa6.23□□□□□ -1.41
RFC1-201ENST00000349703 RAB12Q6IQ22 244 aa6.23□□□□□ -1.41
RFC1-201ENST00000349703 VPS36Q86VN1 386 aa6.23□□□□□ -1.41
RFC1-201ENST00000349703 PQLC1Q8N2U9 271 aa6.23□□□□□ -1.41
RFC1-201ENST00000349703 RAB3IL1Q8TBN0 382 aa6.23□□□□□ -1.41
RFC1-201ENST00000349703 ITPKCQ96DU7 683 aa6.23□□□□□ -1.41
RFC1-201ENST00000349703 C1GALT1C1Q96EU7 318 aa6.23□□□□□ -1.41
RFC1-201ENST00000349703 FAM49AQ9H0Q0 323 aaPredicted RBP6.23□□□□□ -1.41
RFC1-201ENST00000349703 RNF41Q9H4P4 317 aaPredicted RBP6.23□□□□□ -1.41
RFC1-201ENST00000349703 FBRSL1Q9HCM7 1045 aaKnown RBP6.23□□□□□ -1.41
RFC1-201ENST00000349703 UCKL1Q9NWZ5 548 aa6.23□□□□□ -1.41
RFC1-201ENST00000349703 TOR4AQ9NXH8 423 aa6.23□□□□□ -1.41
RFC1-201ENST00000349703 DDX43Q9NXZ2 648 aaKnown RBP6.23□□□□□ -1.41
RFC1-201ENST00000349703 RGL1Q9NZL6 768 aa6.23□□□□□ -1.41
RFC1-201ENST00000349703 FAM96BQ9Y3D0 163 aa6.23□□□□□ -1.41
RFC1-201ENST00000349703 ZMYM6O95789 1325 aa6.23□□□□□ -1.41
RFC1-201ENST00000349703 A0A087WWV3 80 aa6.23□□□□□ -1.41
RFC1-201ENST00000349703 TMEM232C9JQI7 657 aa6.23□□□□□ -1.41
RFC1-201ENST00000349703 FOXP2O15409 715 aa6.23□□□□□ -1.41
RFC1-201ENST00000349703 ENO1P06733 434 aaKnown RBP6.23□□□□□ -1.41
RFC1-201ENST00000349703 ACPPP15309 386 aa6.23□□□□□ -1.41
RFC1-201ENST00000349703 SLC6A3Q01959 620 aa6.23□□□□□ -1.41
RFC1-201ENST00000349703 UBE3AQ05086 875 aa6.23□□□□□ -1.41
RFC1-201ENST00000349703 CTC1Q2NKJ3 1217 aa6.23□□□□□ -1.41
RFC1-201ENST00000349703 SLC2A7Q6PXP3 512 aa6.23□□□□□ -1.41
RFC1-201ENST00000349703 ADGRD1Q6QNK2 874 aa6.23□□□□□ -1.41
RFC1-201ENST00000349703 ENOSF1Q7L5Y1 443 aa6.23□□□□□ -1.41
RFC1-201ENST00000349703 HEATR3Q7Z4Q2 680 aa6.23□□□□□ -1.41
RFC1-201ENST00000349703 MICU3Q86XE3 530 aa6.23□□□□□ -1.41
RFC1-201ENST00000349703 TRMT44Q8IYL2 757 aaKnown RBP6.23□□□□□ -1.41
RFC1-201ENST00000349703 COL26A1Q96A83 441 aa6.23□□□□□ -1.41
RFC1-201ENST00000349703 GSDMAQ96QA5 445 aa6.23□□□□□ -1.41
RFC1-201ENST00000349703 MMP19Q99542 508 aa6.23□□□□□ -1.41
RFC1-201ENST00000349703 CCDC106Q9BWC9 280 aa6.23□□□□□ -1.41
RFC1-201ENST00000349703 SOX17Q9H6I2 414 aaPredicted RBP6.23□□□□□ -1.41
RFC1-201ENST00000349703 NOP53Q9NZM5 478 aaKnown RBP6.23□□□□□ -1.41
RFC1-201ENST00000349703 ATXN10Q9UBB4 475 aa6.23□□□□□ -1.41
RFC1-201ENST00000349703 LRFN2Q9ULH4 789 aa6.23□□□□□ -1.41
RFC1-201ENST00000349703 SATB2Q9UPW6 733 aa6.23□□□□□ -1.41
RFC1-201ENST00000349703 EXOC5O00471 708 aa6.23□□□□□ -1.41
RFC1-201ENST00000349703 IFIT3O14879 490 aaKnown RBP6.23□□□□□ -1.41
RFC1-201ENST00000349703 VIPP01282 170 aa6.23□□□□□ -1.41
RFC1-201ENST00000349703 DUSP2Q05923 314 aa6.23□□□□□ -1.41
RFC1-201ENST00000349703 TSC22D1Q15714 1073 aa6.23□□□□□ -1.41
RFC1-201ENST00000349703 NCAPH2Q6IBW4 605 aa6.23□□□□□ -1.41
RFC1-201ENST00000349703 YTHDF3Q7Z739 585 aaKnown RBP6.23□□□□□ -1.41
RFC1-201ENST00000349703 SIX6OS1Q8N1H7 587 aa6.23□□□□□ -1.41
RFC1-201ENST00000349703 TC2NQ8N9U0 490 aa6.23□□□□□ -1.41
RFC1-201ENST00000349703 B3GALNT2Q8NCR0 500 aa6.23□□□□□ -1.41
RFC1-201ENST00000349703 FEZF2Q8TBJ5 459 aa6.23□□□□□ -1.41
RFC1-201ENST00000349703 LMBR1Q8WVP7 490 aa6.23□□□□□ -1.41
RFC1-201ENST00000349703 MARK4Q96L34 752 aa6.23□□□□□ -1.41
RFC1-201ENST00000349703 HIST1H2AAQ96QV6 131 aa6.23□□□□□ -1.41
RFC1-201ENST00000349703 SENP7Q9BQF6 1050 aa6.23□□□□□ -1.41
RFC1-201ENST00000349703 SORBS1Q9BX66 1292 aaKnown RBP6.23□□□□□ -1.41
RFC1-201ENST00000349703 TRIM31Q9BZY9 425 aa6.23□□□□□ -1.41
RFC1-201ENST00000349703 ZCCHC2Q9C0B9 1178 aaKnown RBP6.23□□□□□ -1.41
RFC1-201ENST00000349703 CFAP73A6NFT4 308 aa6.22□□□□□ -1.41
RFC1-201ENST00000349703 F5H697 171 aa6.22□□□□□ -1.41
RFC1-201ENST00000349703 KERAO60938 352 aa6.22□□□□□ -1.41
RFC1-201ENST00000349703 HNRNPA1P09651 372 aaKnown RBP eCLIP6.22□□□□□ -1.41
RFC1-201ENST00000349703 HOXC12P31275 282 aa6.22□□□□□ -1.41
RFC1-201ENST00000349703 ATXN1P54253 815 aaKnown RBP6.22□□□□□ -1.41
RFC1-201ENST00000349703 LSAMPQ13449 338 aa6.22□□□□□ -1.41
RFC1-201ENST00000349703 TDRD12Q587J7 1177 aaKnown RBP6.22□□□□□ -1.41
RFC1-201ENST00000349703 WDR44Q5JSH3 913 aa6.22□□□□□ -1.41
RFC1-201ENST00000349703 THNSL1Q8IYQ7 743 aa6.22□□□□□ -1.41
RFC1-201ENST00000349703 OR8H3Q8N146 312 aa6.22□□□□□ -1.41
RFC1-201ENST00000349703 ZCCHC9Q8N567 271 aaKnown RBP6.22□□□□□ -1.41
RFC1-201ENST00000349703 CCDC197Q8NCU1 140 aa6.22□□□□□ -1.41
RFC1-201ENST00000349703 CCDC26Q8TAB7 109 aa6.22□□□□□ -1.41
RFC1-201ENST00000349703 FEM1CQ96JP0 617 aa6.22□□□□□ -1.41
RFC1-201ENST00000349703 PNKPQ96T60 521 aa6.22□□□□□ -1.41
RFC1-201ENST00000349703 B3GNT5Q9BYG0 378 aa6.22□□□□□ -1.41
RFC1-201ENST00000349703 FOXQ1Q9C009 403 aa6.22□□□□□ -1.41
RFC1-201ENST00000349703 VPS16Q9H269 839 aa6.22□□□□□ -1.41
RFC1-201ENST00000349703 FOXP1Q9H334 677 aaPredicted RBP6.22□□□□□ -1.41
RFC1-201ENST00000349703 OBP2BQ9NPH6 170 aa6.22□□□□□ -1.41
RFC1-201ENST00000349703 GTSE1Q9NYZ3 720 aa6.22□□□□□ -1.41
RFC1-201ENST00000349703 SLC4A4Q9Y6R1 1079 aa6.22□□□□□ -1.41
RFC1-201ENST00000349703 LRRD1A4D1F6 860 aa6.22□□□□□ -1.41
RFC1-201ENST00000349703 KCNJ18B7U540 433 aa6.22□□□□□ -1.41
RFC1-201ENST00000349703 CTDSP2O14595 271 aa6.22□□□□□ -1.41
RFC1-201ENST00000349703 NDUFA10O95299 355 aa6.22□□□□□ -1.41
RFC1-201ENST00000349703 CYP21A2P08686 494 aa6.22□□□□□ -1.41
RFC1-201ENST00000349703 ATP6V1C1P21283 382 aa6.22□□□□□ -1.41
RFC1-201ENST00000349703 MAP3K7CLP57077 242 aa6.22□□□□□ -1.41
RFC1-201ENST00000349703 KCNJ12Q14500 433 aa6.22□□□□□ -1.41
RFC1-201ENST00000349703 MED22Q15528 200 aa6.22□□□□□ -1.41
RFC1-201ENST00000349703 C1orf53Q5VUE5 145 aa6.22□□□□□ -1.41
RFC1-201ENST00000349703 TRMT10BQ6PF06 316 aaKnown RBP6.22□□□□□ -1.41
RFC1-201ENST00000349703 DET1Q7L5Y6 550 aa6.22□□□□□ -1.41
RFC1-201ENST00000349703 CPT1CQ8TCG5 803 aa6.22□□□□□ -1.41
RFC1-201ENST00000349703 BCL7CQ8WUZ0 217 aaPredicted RBP6.22□□□□□ -1.41
RFC1-201ENST00000349703 TCP11Q8WWU5 503 aa6.22□□□□□ -1.41
RFC1-201ENST00000349703 COA7Q96BR5 231 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms