RNA–Protein interactions for RNA: ENST00000347691.9

TRAPPC6B-202, Transcript of trafficking protein particle complex 6B, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC6B, Length 3,229 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6B-202ENST00000347691 SLC25A11Q02978 314 aaKnown RBP10.56□□□□□ -0.72
TRAPPC6B-202ENST00000347691 EMC2Q15006 297 aa10.56□□□□□ -0.72
TRAPPC6B-202ENST00000347691 FAM47CQ5HY64 1035 aa10.56□□□□□ -0.72
TRAPPC6B-202ENST00000347691 ANGEL2Q5VTE6 544 aaKnown RBP10.56□□□□□ -0.72
TRAPPC6B-202ENST00000347691 GPAT2Q6NUI2 795 aa10.56□□□□□ -0.72
TRAPPC6B-202ENST00000347691 FAM83AQ86UY5 434 aa10.56□□□□□ -0.72
TRAPPC6B-202ENST00000347691 PPP2R3CQ969Q6 453 aa10.56□□□□□ -0.72
TRAPPC6B-202ENST00000347691 E2F7Q96AV8 911 aa10.56□□□□□ -0.72
TRAPPC6B-202ENST00000347691 SRPK1Q96SB4 655 aaKnown RBP10.56□□□□□ -0.72
TRAPPC6B-202ENST00000347691 KLF6Q99612 283 aaPredicted RBP10.56□□□□□ -0.72
TRAPPC6B-202ENST00000347691 STN1Q9H668 368 aaKnown RBP10.56□□□□□ -0.72
TRAPPC6B-202ENST00000347691 TMEM134Q9H6X4 195 aa10.56□□□□□ -0.72
TRAPPC6B-202ENST00000347691 RAVER2Q9HCJ3 691 aaKnown RBP10.56□□□□□ -0.72
TRAPPC6B-202ENST00000347691 SLC4A7Q9Y6M7 1214 aa10.56□□□□□ -0.72
TRAPPC6B-202ENST00000347691 A0A0B4J269 797 aa10.55□□□□□ -0.72
TRAPPC6B-202ENST00000347691 H0YIN7 160 aa10.55□□□□□ -0.72
TRAPPC6B-202ENST00000347691 BIRC5O15392 142 aa10.55□□□□□ -0.72
TRAPPC6B-202ENST00000347691 ZNF862O60290 1169 aa10.55□□□□□ -0.72
TRAPPC6B-202ENST00000347691 KRT38O76015 456 aa10.55□□□□□ -0.72
TRAPPC6B-202ENST00000347691 TMEM63AO94886 807 aa10.55□□□□□ -0.72
TRAPPC6B-202ENST00000347691 RTN3O95197 1032 aaPredicted RBP10.55□□□□□ -0.72
TRAPPC6B-202ENST00000347691 KRT3P12035 628 aa10.55□□□□□ -0.72
TRAPPC6B-202ENST00000347691 ANPEPP15144 967 aa10.55□□□□□ -0.72
TRAPPC6B-202ENST00000347691 ELK3P41970 407 aa10.55□□□□□ -0.72
TRAPPC6B-202ENST00000347691 ACTR3P61158 418 aa10.55□□□□□ -0.72
TRAPPC6B-202ENST00000347691 TMPRSS15P98073 1019 aa10.55□□□□□ -0.72
TRAPPC6B-202ENST00000347691 XIAPP98170 497 aa10.55□□□□□ -0.72
TRAPPC6B-202ENST00000347691 FAAP100Q0VG06 881 aa10.55□□□□□ -0.72
TRAPPC6B-202ENST00000347691 TFDP2Q14188 446 aa10.55□□□□□ -0.72
TRAPPC6B-202ENST00000347691 SPDYE2Q495Y8 402 aa10.55□□□□□ -0.72
TRAPPC6B-202ENST00000347691 TMCO4Q5TGY1 634 aa10.55□□□□□ -0.72
TRAPPC6B-202ENST00000347691 SWSAP1Q6NVH7 229 aa10.55□□□□□ -0.72
TRAPPC6B-202ENST00000347691 C4orf22Q6V702 233 aa10.55□□□□□ -0.72
TRAPPC6B-202ENST00000347691 VSIG10LQ86VR7 867 aa10.55□□□□□ -0.72
TRAPPC6B-202ENST00000347691 KCTD6Q8NC69 237 aa10.55□□□□□ -0.72
TRAPPC6B-202ENST00000347691 DTX3LQ8TDB6 740 aa10.55□□□□□ -0.72
TRAPPC6B-202ENST00000347691 WDR60Q8WVS4 1066 aa10.55□□□□□ -0.72
TRAPPC6B-202ENST00000347691 LRRC39Q96DD0 335 aa10.55□□□□□ -0.72
TRAPPC6B-202ENST00000347691 ZNF341Q9BYN7 854 aa10.55□□□□□ -0.72
TRAPPC6B-202ENST00000347691 ADAM33Q9BZ11 813 aa10.55□□□□□ -0.72
TRAPPC6B-202ENST00000347691 NMUR2Q9GZQ4 415 aa10.55□□□□□ -0.72
TRAPPC6B-202ENST00000347691 LHX5Q9H2C1 402 aa10.55□□□□□ -0.72
TRAPPC6B-202ENST00000347691 JPH1Q9HDC5 661 aaPredicted RBP10.55□□□□□ -0.72
TRAPPC6B-202ENST00000347691 PAK5Q9P286 719 aa10.55□□□□□ -0.72
TRAPPC6B-202ENST00000347691 PPARGC1AQ9UBK2 798 aaKnown RBP10.55□□□□□ -0.72
TRAPPC6B-202ENST00000347691 TEX264Q9Y6I9 313 aa10.55□□□□□ -0.72
TRAPPC6B-202ENST00000347691 PSME4Q14997 1843 aa10.55□□□□□ -0.72
TRAPPC6B-202ENST00000347691 PTPRJQ12913 1337 aa10.55□□□□□ -0.72
TRAPPC6B-202ENST00000347691 CAPN14A8MX76 684 aa10.55□□□□□ -0.72
TRAPPC6B-202ENST00000347691 H3BRJ5 948 aa10.55□□□□□ -0.72
TRAPPC6B-202ENST00000347691 CSDE1O75534 798 aaKnown RBP10.55□□□□□ -0.72
TRAPPC6B-202ENST00000347691 RNF8O76064 485 aa10.55□□□□□ -0.72
TRAPPC6B-202ENST00000347691 GDF10P55107 478 aa10.55□□□□□ -0.72
TRAPPC6B-202ENST00000347691 SOX10P56693 466 aa10.55□□□□□ -0.72
TRAPPC6B-202ENST00000347691 KBTBD12Q3ZCT8 623 aa10.55□□□□□ -0.72
TRAPPC6B-202ENST00000347691 SH2D5Q6ZV89 423 aa10.55□□□□□ -0.72
TRAPPC6B-202ENST00000347691 MYLK4Q86YV6 388 aaPredicted RBP10.55□□□□□ -0.72
TRAPPC6B-202ENST00000347691 BRSK2Q8IWQ3 736 aa10.55□□□□□ -0.72
TRAPPC6B-202ENST00000347691 FLAD1Q8NFF5 587 aa10.55□□□□□ -0.72
TRAPPC6B-202ENST00000347691 PIP4K2CQ8TBX8 421 aa10.55□□□□□ -0.72
TRAPPC6B-202ENST00000347691 SERAC1Q96JX3 654 aa10.55□□□□□ -0.72
TRAPPC6B-202ENST00000347691 GJD4Q96KN9 370 aaPredicted RBP10.55□□□□□ -0.72
TRAPPC6B-202ENST00000347691 ASCC2Q9H1I8 757 aaPredicted RBP10.55□□□□□ -0.72
TRAPPC6B-202ENST00000347691 ZWILCHQ9H900 591 aa10.55□□□□□ -0.72
TRAPPC6B-202ENST00000347691 ALG13Q9NP73 1137 aaKnown RBP10.55□□□□□ -0.72
TRAPPC6B-202ENST00000347691 HOMER2Q9NSB8 354 aa10.55□□□□□ -0.72
TRAPPC6B-202ENST00000347691 PLLPQ9Y342 182 aa10.55□□□□□ -0.72
TRAPPC6B-202ENST00000347691 NUMBLQ9Y6R0 609 aa10.55□□□□□ -0.72
TRAPPC6B-202ENST00000347691 CNTNAP2Q9UHC6 1331 aa10.55□□□□□ -0.72
TRAPPC6B-202ENST00000347691 KBTBD13C9JR72 458 aa10.54□□□□□ -0.72
TRAPPC6B-202ENST00000347691 RBP3P10745 1247 aa10.54□□□□□ -0.72
TRAPPC6B-202ENST00000347691 CRABP2P29373 138 aa10.54□□□□□ -0.72
TRAPPC6B-202ENST00000347691 SSTR3P32745 418 aaPredicted RBP10.54□□□□□ -0.72
TRAPPC6B-202ENST00000347691 CCNFP41002 786 aa10.54□□□□□ -0.72
TRAPPC6B-202ENST00000347691 SERPINB9P50453 376 aa10.54□□□□□ -0.72
TRAPPC6B-202ENST00000347691 RPL26P61254 145 aaKnown RBP10.54□□□□□ -0.72
TRAPPC6B-202ENST00000347691 CUL3Q13618 768 aa10.54□□□□□ -0.72
TRAPPC6B-202ENST00000347691 RNF220Q5VTB9 566 aa10.54□□□□□ -0.72
TRAPPC6B-202ENST00000347691 TXNRD3NBQ6F5E7 133 aa10.54□□□□□ -0.72
TRAPPC6B-202ENST00000347691 ARCQ7LC44 396 aa10.54□□□□□ -0.72
TRAPPC6B-202ENST00000347691 DMAP1Q9NPF5 467 aaPredicted RBP10.54□□□□□ -0.72
TRAPPC6B-202ENST00000347691 CLRN2A0PK11 232 aa10.54□□□□□ -0.72
TRAPPC6B-202ENST00000347691 TRIM49D1C9J1S8 452 aa10.54□□□□□ -0.72
TRAPPC6B-202ENST00000347691 ENO1P06733 434 aaKnown RBP10.54□□□□□ -0.72
TRAPPC6B-202ENST00000347691 SERPINA6P08185 405 aa10.54□□□□□ -0.72
TRAPPC6B-202ENST00000347691 POLE2P56282 527 aa10.54□□□□□ -0.72
TRAPPC6B-202ENST00000347691 WASHC5Q12768 1159 aa10.54□□□□□ -0.72
TRAPPC6B-202ENST00000347691 TRPC3Q13507 836 aa10.54□□□□□ -0.72
TRAPPC6B-202ENST00000347691 NUDCD3Q8IVD9 361 aa10.54□□□□□ -0.72
TRAPPC6B-202ENST00000347691 ST13P4Q8IZP2 240 aaPredicted RBP10.54□□□□□ -0.72
TRAPPC6B-202ENST00000347691 ECSITQ9BQ95 431 aa10.54□□□□□ -0.72
TRAPPC6B-202ENST00000347691 WDR83Q9BRX9 315 aaKnown RBP10.54□□□□□ -0.72
TRAPPC6B-202ENST00000347691 MAF1Q9H063 256 aa10.54□□□□□ -0.72
TRAPPC6B-202ENST00000347691 PORCNQ9H237 461 aa10.54□□□□□ -0.72
TRAPPC6B-202ENST00000347691 KRT82Q9NSB4 513 aa10.54□□□□□ -0.72
TRAPPC6B-202ENST00000347691 CISHQ9NSE2 258 aa10.54□□□□□ -0.72
TRAPPC6B-202ENST00000347691 SIRPGQ9P1W8 387 aa10.54□□□□□ -0.72
TRAPPC6B-202ENST00000347691 SSX2IPQ9Y2D8 614 aa10.54□□□□□ -0.72
TRAPPC6B-202ENST00000347691 CNTNAP1P78357 1384 aa10.54□□□□□ -0.72
TRAPPC6B-202ENST00000347691 ZNF541Q9H0D2 1346 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms