RNA–Protein interactions for RNA: ENST00000347617.10

HMGA1-202, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,773 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-202ENST00000347617 THOC5Q13769 683 aaKnown RBP16.59■□□□□ 0.25
HMGA1-202ENST00000347617 LIN52Q52LA3 116 aa16.59■□□□□ 0.25
HMGA1-202ENST00000347617 FAM160B1Q5W0V3 765 aa16.59■□□□□ 0.25
HMGA1-202ENST00000347617 RINLQ6ZS11 566 aa16.59■□□□□ 0.25
HMGA1-202ENST00000347617 ACAD11Q709F0 780 aa16.59■□□□□ 0.25
HMGA1-202ENST00000347617 HAUS6Q7Z4H7 955 aa16.59■□□□□ 0.25
HMGA1-202ENST00000347617 PRUNE1Q86TP1 453 aa16.59■□□□□ 0.25
HMGA1-202ENST00000347617 LCA5Q86VQ0 697 aa16.59■□□□□ 0.25
HMGA1-202ENST00000347617 MYLK4Q86YV6 388 aaPredicted RBP16.59■□□□□ 0.25
HMGA1-202ENST00000347617 APBB2Q92870 758 aa16.59■□□□□ 0.25
HMGA1-202ENST00000347617 NKD2Q969F2 451 aaPredicted RBP16.59■□□□□ 0.25
HMGA1-202ENST00000347617 ECSITQ9BQ95 431 aa16.59■□□□□ 0.25
HMGA1-202ENST00000347617 ZNF408Q9H9D4 720 aa16.59■□□□□ 0.25
HMGA1-202ENST00000347617 NRBP2Q9NSY0 501 aa16.59■□□□□ 0.25
HMGA1-202ENST00000347617 RAB20Q9NX57 234 aa16.59■□□□□ 0.25
HMGA1-202ENST00000347617 KCNK4Q9NYG8 393 aa16.59■□□□□ 0.25
HMGA1-202ENST00000347617 ZNF148Q9UQR1 794 aa16.59■□□□□ 0.25
HMGA1-202ENST00000347617 TBC1D30Q9Y2I9 924 aa16.59■□□□□ 0.25
HMGA1-202ENST00000347617 A0A0G2JND7 137 aa16.58■□□□□ 0.24
HMGA1-202ENST00000347617 IQANK1A0A1B0GTG1 560 aa16.58■□□□□ 0.24
HMGA1-202ENST00000347617 A0A1W2PPM1 405 aa16.58■□□□□ 0.24
HMGA1-202ENST00000347617 CYP1A1P04798 512 aaPredicted RBP16.58■□□□□ 0.24
HMGA1-202ENST00000347617 ARL4CP56559 192 aa16.58■□□□□ 0.24
HMGA1-202ENST00000347617 NFX1Q12986 1120 aaKnown RBP16.58■□□□□ 0.24
HMGA1-202ENST00000347617 PRKD1Q15139 912 aaPredicted RBP16.58■□□□□ 0.24
HMGA1-202ENST00000347617 CNPY1Q3B7I2 92 aa16.58■□□□□ 0.24
HMGA1-202ENST00000347617 TBC1D25Q3MII6 688 aa16.58■□□□□ 0.24
HMGA1-202ENST00000347617 KYAT3Q6YP21 454 aaKnown RBP16.58■□□□□ 0.24
HMGA1-202ENST00000347617 EXOC8Q8IYI6 725 aa16.58■□□□□ 0.24
HMGA1-202ENST00000347617 ZBED8Q8IZ13 594 aa16.58■□□□□ 0.24
HMGA1-202ENST00000347617 PLEKHO2Q8TD55 490 aa16.58■□□□□ 0.24
HMGA1-202ENST00000347617 BRI3BPQ8WY22 251 aa16.58■□□□□ 0.24
HMGA1-202ENST00000347617 OXNAD1Q96HP4 312 aaPredicted RBP16.58■□□□□ 0.24
HMGA1-202ENST00000347617 CBWD1Q9BRT8 395 aa16.58■□□□□ 0.24
HMGA1-202ENST00000347617 HEMGNQ9BXL5 484 aa16.58■□□□□ 0.24
HMGA1-202ENST00000347617 IRAK4Q9NWZ3 460 aa16.58■□□□□ 0.24
HMGA1-202ENST00000347617 RABGEF1Q9UJ41 708 aa16.58■□□□□ 0.24
HMGA1-202ENST00000347617 DCTN4Q9UJW0 460 aa16.58■□□□□ 0.24
HMGA1-202ENST00000347617 LRRC37A2A6NM11 1700 aa16.58■□□□□ 0.24
HMGA1-202ENST00000347617 SMIM31A0A1B0GVY4 71 aa16.57■□□□□ 0.24
HMGA1-202ENST00000347617 FAM155BO75949 473 aa16.57■□□□□ 0.24
HMGA1-202ENST00000347617 TM7SF2O76062 418 aa16.57■□□□□ 0.24
HMGA1-202ENST00000347617 CELF2O95319 508 aaKnown RBP16.57■□□□□ 0.24
HMGA1-202ENST00000347617 OATP04181 439 aa16.57■□□□□ 0.24
HMGA1-202ENST00000347617 SERPINB3P29508 390 aa16.57■□□□□ 0.24
HMGA1-202ENST00000347617 VCPP55072 806 aaKnown RBP16.57■□□□□ 0.24
HMGA1-202ENST00000347617 IRX4P78413 519 aa16.57■□□□□ 0.24
HMGA1-202ENST00000347617 PDIA2Q13087 525 aaKnown RBP16.57■□□□□ 0.24
HMGA1-202ENST00000347617 GPS1Q13098 491 aa16.57■□□□□ 0.24
HMGA1-202ENST00000347617 DMP1Q13316 513 aaPredicted RBP16.57■□□□□ 0.24
HMGA1-202ENST00000347617 LSAMPQ13449 338 aa16.57■□□□□ 0.24
HMGA1-202ENST00000347617 ITGA9Q13797 1035 aa16.57■□□□□ 0.24
HMGA1-202ENST00000347617 MAP7Q14244 749 aa16.57■□□□□ 0.24
HMGA1-202ENST00000347617 HIF1AQ16665 826 aa16.57■□□□□ 0.24
HMGA1-202ENST00000347617 PLA2G4FQ68DD2 849 aa16.57■□□□□ 0.24
HMGA1-202ENST00000347617 MARK2Q7KZI7 788 aaKnown RBP16.57■□□□□ 0.24
HMGA1-202ENST00000347617 MON1BQ7L1V2 547 aa16.57■□□□□ 0.24
HMGA1-202ENST00000347617 PHC3Q8NDX5 983 aa16.57■□□□□ 0.24
HMGA1-202ENST00000347617 TCP10LQ8TDR4 215 aa16.57■□□□□ 0.24
HMGA1-202ENST00000347617 MZB1Q8WU39 189 aa16.57■□□□□ 0.24
HMGA1-202ENST00000347617 FNBP1Q96RU3 617 aa16.57■□□□□ 0.24
HMGA1-202ENST00000347617 NDNQ99608 321 aa16.57■□□□□ 0.24
HMGA1-202ENST00000347617 C1orf21Q9H246 121 aa16.57■□□□□ 0.24
HMGA1-202ENST00000347617 IP6K2Q9UHH9 426 aa16.57■□□□□ 0.24
HMGA1-202ENST00000347617 SORCS3Q9UPU3 1222 aa16.57■□□□□ 0.24
HMGA1-202ENST00000347617 PHF24Q9UPV7 400 aa16.57■□□□□ 0.24
HMGA1-202ENST00000347617 FCHO1O14526 889 aa16.56■□□□□ 0.24
HMGA1-202ENST00000347617 LGR5O75473 907 aa16.56■□□□□ 0.24
HMGA1-202ENST00000347617 DLDP09622 509 aaKnown RBP16.56■□□□□ 0.24
HMGA1-202ENST00000347617 CYP2C8P10632 490 aa16.56■□□□□ 0.24
HMGA1-202ENST00000347617 FGFR1P11362 822 aa16.56■□□□□ 0.24
HMGA1-202ENST00000347617 ACTR3P61158 418 aa16.56■□□□□ 0.24
HMGA1-202ENST00000347617 SNRNP35Q16560 246 aaKnown RBP16.56■□□□□ 0.24
HMGA1-202ENST00000347617 ZNF792Q3KQV3 632 aa16.56■□□□□ 0.24
HMGA1-202ENST00000347617 CELF3Q5SZQ8 465 aaKnown RBP16.56■□□□□ 0.24
HMGA1-202ENST00000347617 FAM102BQ5T8I3 360 aa16.56■□□□□ 0.24
HMGA1-202ENST00000347617 PLEKHA7Q6IQ23 1121 aa16.56■□□□□ 0.24
HMGA1-202ENST00000347617 SCUBE1Q8IWY4 988 aa16.56■□□□□ 0.24
HMGA1-202ENST00000347617 TMEM161BQ8NDZ6 487 aa16.56■□□□□ 0.24
HMGA1-202ENST00000347617 MIPOL1Q8TD10 442 aa16.56■□□□□ 0.24
HMGA1-202ENST00000347617 WDR60Q8WVS4 1066 aa16.56■□□□□ 0.24
HMGA1-202ENST00000347617 SEMA4DQ92854 862 aa16.56■□□□□ 0.24
HMGA1-202ENST00000347617 APOPT1Q96IL0 206 aa16.56■□□□□ 0.24
HMGA1-202ENST00000347617 FAM167AQ96KS9 214 aa16.56■□□□□ 0.24
HMGA1-202ENST00000347617 PARK7Q99497 189 aaKnown RBP16.56■□□□□ 0.24
HMGA1-202ENST00000347617 KCNK13Q9HB14 408 aa16.56■□□□□ 0.24
HMGA1-202ENST00000347617 DDX56Q9NY93 547 aaKnown RBP16.56■□□□□ 0.24
HMGA1-202ENST00000347617 MYH9P35579 1960 aaKnown RBP16.56■□□□□ 0.24
HMGA1-202ENST00000347617 E7ESA3 106 aa16.56■□□□□ 0.24
HMGA1-202ENST00000347617 SPECC1L-ADORA2AF8WAN1 911 aa16.56■□□□□ 0.24
HMGA1-202ENST00000347617 SPAG6O75602 509 aa16.56■□□□□ 0.24
HMGA1-202ENST00000347617 ADRB2P07550 413 aa16.56■□□□□ 0.24
HMGA1-202ENST00000347617 PABPC4LP0CB38 370 aaKnown RBP16.56■□□□□ 0.24
HMGA1-202ENST00000347617 KRT5P13647 590 aa16.56■□□□□ 0.24
HMGA1-202ENST00000347617 PIK3CAP42336 1068 aa16.56■□□□□ 0.24
HMGA1-202ENST00000347617 NPTX2P47972 431 aa16.56■□□□□ 0.24
HMGA1-202ENST00000347617 SLC26A2P50443 739 aa16.56■□□□□ 0.24
HMGA1-202ENST00000347617 PEX3P56589 373 aa16.56■□□□□ 0.24
HMGA1-202ENST00000347617 C1QBPQ07021 282 aaKnown RBP16.56■□□□□ 0.24
HMGA1-202ENST00000347617 TARBP2Q15633 366 aaKnown RBP16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms