RNA–Protein interactions for RNA: ENST00000346569.6

ECM1-201, Transcript of extracellular matrix protein 1, humanhuman

TSL 1 (best) BASIC

Gene ECM1, Length 1,444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-201ENST00000346569 CCDC14Q49A88 953 aa11.53□□□□□ -0.56
ECM1-201ENST00000346569 ATP13A4Q4VNC1 1196 aa11.53□□□□□ -0.56
ECM1-201ENST00000346569 FAM171A1Q5VUB5 890 aa11.53□□□□□ -0.56
ECM1-201ENST00000346569 AADACL2Q6P093 401 aa11.53□□□□□ -0.56
ECM1-201ENST00000346569 TMEM173Q86WV6 379 aaPredicted RBP11.53□□□□□ -0.56
ECM1-201ENST00000346569 KATNAL2Q8IYT4 538 aa11.53□□□□□ -0.56
ECM1-201ENST00000346569 RNF168Q8IYW5 571 aaPredicted RBP11.53□□□□□ -0.56
ECM1-201ENST00000346569 GPR161Q8N6U8 529 aaKnown RBP11.53□□□□□ -0.56
ECM1-201ENST00000346569 CLEC4CQ8WTT0 213 aa11.53□□□□□ -0.56
ECM1-201ENST00000346569 CENPIQ92674 756 aaPredicted RBP11.53□□□□□ -0.56
ECM1-201ENST00000346569 SMARCD1Q96GM5 515 aa11.53□□□□□ -0.56
ECM1-201ENST00000346569 RNPC3Q96LT9 517 aaKnown RBP11.53□□□□□ -0.56
ECM1-201ENST00000346569 CNPY3Q9BT09 278 aa11.53□□□□□ -0.56
ECM1-201ENST00000346569 C11orf84Q9BUA3 381 aaPredicted RBP11.53□□□□□ -0.56
ECM1-201ENST00000346569 DDX23Q9BUQ8 820 aaKnown RBP11.53□□□□□ -0.56
ECM1-201ENST00000346569 ASNSD1Q9NWL6 643 aa11.53□□□□□ -0.56
ECM1-201ENST00000346569 COL4A6Q14031 1691 aa11.53□□□□□ -0.56
ECM1-201ENST00000346569 GRAP2O75791 330 aa11.52□□□□□ -0.56
ECM1-201ENST00000346569 ZRANB2O95218 330 aaKnown RBP eCLIP11.52□□□□□ -0.56
ECM1-201ENST00000346569 FGGP02679 453 aa11.52□□□□□ -0.56
ECM1-201ENST00000346569 GLI1P08151 1106 aa11.52□□□□□ -0.56
ECM1-201ENST00000346569 GPD1P21695 349 aa11.52□□□□□ -0.56
ECM1-201ENST00000346569 PCK1P35558 622 aa11.52□□□□□ -0.56
ECM1-201ENST00000346569 PBX3P40426 434 aa11.52□□□□□ -0.56
ECM1-201ENST00000346569 ALDH7A1P49419 539 aaKnown RBP11.52□□□□□ -0.56
ECM1-201ENST00000346569 CDR1P51861 262 aa11.52□□□□□ -0.56
ECM1-201ENST00000346569 SLC25A11Q02978 314 aaKnown RBP11.52□□□□□ -0.56
ECM1-201ENST00000346569 CLUL1Q15846 466 aa11.52□□□□□ -0.56
ECM1-201ENST00000346569 EFHC1Q5JVL4 640 aa11.52□□□□□ -0.56
ECM1-201ENST00000346569 TEX35Q5T0J7 233 aa11.52□□□□□ -0.56
ECM1-201ENST00000346569 TXNRD3NBQ6F5E7 133 aa11.52□□□□□ -0.56
ECM1-201ENST00000346569 PM20D1Q6GTS8 502 aa11.52□□□□□ -0.56
ECM1-201ENST00000346569 POLNQ7Z5Q5 900 aa11.52□□□□□ -0.56
ECM1-201ENST00000346569 DCP1BQ8IZD4 617 aaKnown RBP11.52□□□□□ -0.56
ECM1-201ENST00000346569 ZDHHC14Q8IZN3 488 aa11.52□□□□□ -0.56
ECM1-201ENST00000346569 SCML4Q8N228 414 aa11.52□□□□□ -0.56
ECM1-201ENST00000346569 EXD1Q8NHP7 514 aa11.52□□□□□ -0.56
ECM1-201ENST00000346569 IGSF21Q96ID5 467 aa11.52□□□□□ -0.56
ECM1-201ENST00000346569 EPC1Q9H2F5 836 aa11.52□□□□□ -0.56
ECM1-201ENST00000346569 ANKZF1Q9H8Y5 726 aa11.52□□□□□ -0.56
ECM1-201ENST00000346569 PNPLA8Q9NP80 782 aa11.52□□□□□ -0.56
ECM1-201ENST00000346569 CHST7Q9NS84 486 aa11.52□□□□□ -0.56
ECM1-201ENST00000346569 KRT82Q9NSB4 513 aa11.52□□□□□ -0.56
ECM1-201ENST00000346569 RBM12Q9NTZ6 932 aaKnown RBP11.52□□□□□ -0.56
ECM1-201ENST00000346569 PCDH10Q9P2E7 1040 aa11.52□□□□□ -0.56
ECM1-201ENST00000346569 USTQ9Y2C2 406 aa11.52□□□□□ -0.56
ECM1-201ENST00000346569 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.52□□□□□ -0.56
ECM1-201ENST00000346569 NR2E1Q9Y466 385 aa11.52□□□□□ -0.56
ECM1-201ENST00000346569 USP3Q9Y6I4 520 aa11.52□□□□□ -0.56
ECM1-201ENST00000346569 LAMA2P24043 3122 aaKnown RBP11.52□□□□□ -0.57
ECM1-201ENST00000346569 LTBP2Q14767 1821 aa11.52□□□□□ -0.57
ECM1-201ENST00000346569 SF3B1O75533 1304 aaKnown RBP eCLIP11.52□□□□□ -0.57
ECM1-201ENST00000346569 CEP290O15078 2479 aa11.52□□□□□ -0.57
ECM1-201ENST00000346569 OR6C75A6NL08 312 aa11.52□□□□□ -0.57
ECM1-201ENST00000346569 TNFRSF10BO14763 440 aa11.52□□□□□ -0.57
ECM1-201ENST00000346569 ENDOD1O94919 500 aa11.52□□□□□ -0.57
ECM1-201ENST00000346569 FBXO21O94952 628 aa11.52□□□□□ -0.57
ECM1-201ENST00000346569 TRUB2O95900 331 aaKnown RBP11.52□□□□□ -0.57
ECM1-201ENST00000346569 FGBP02675 491 aa11.52□□□□□ -0.57
ECM1-201ENST00000346569 IL1R2P27930 398 aa11.52□□□□□ -0.57
ECM1-201ENST00000346569 PTPN9P43378 593 aa11.52□□□□□ -0.57
ECM1-201ENST00000346569 RABGGTBP53611 331 aa11.52□□□□□ -0.57
ECM1-201ENST00000346569 DAOAP59103 153 aa11.52□□□□□ -0.57
ECM1-201ENST00000346569 C2orf54Q08AI8 447 aa11.52□□□□□ -0.57
ECM1-201ENST00000346569 ADIGQ0VDE8 80 aa11.52□□□□□ -0.57
ECM1-201ENST00000346569 PPIGQ13427 754 aaKnown RBP eCLIP11.52□□□□□ -0.57
ECM1-201ENST00000346569 SIX1Q15475 284 aaPredicted RBP11.52□□□□□ -0.57
ECM1-201ENST00000346569 ELF2Q15723 593 aa11.52□□□□□ -0.57
ECM1-201ENST00000346569 NFE2Q16621 373 aaPredicted RBP11.52□□□□□ -0.57
ECM1-201ENST00000346569 TMEM240Q5SV17 173 aa11.52□□□□□ -0.57
ECM1-201ENST00000346569 SH3PXD2AQ5TCZ1 1133 aa11.52□□□□□ -0.57
ECM1-201ENST00000346569 KCNT2Q6UVM3 1135 aa11.52□□□□□ -0.57
ECM1-201ENST00000346569 RSPO2Q6UXX9 243 aaPredicted RBP11.52□□□□□ -0.57
ECM1-201ENST00000346569 C4orf50Q6ZRC1 276 aa11.52□□□□□ -0.57
ECM1-201ENST00000346569 ZNF365Q70YC5 407 aa11.52□□□□□ -0.57
ECM1-201ENST00000346569 BHLHA9Q7RTU4 235 aa11.52□□□□□ -0.57
ECM1-201ENST00000346569 TMCO2Q7Z6W1 182 aaPredicted RBP11.52□□□□□ -0.57
ECM1-201ENST00000346569 SLC13A5Q86YT5 568 aaPredicted RBP11.52□□□□□ -0.57
ECM1-201ENST00000346569 CMTR2Q8IYT2 770 aaKnown RBP11.52□□□□□ -0.57
ECM1-201ENST00000346569 RCOR2Q8IZ40 523 aa11.52□□□□□ -0.57
ECM1-201ENST00000346569 CMASQ8NFW8 434 aaPredicted RBP11.52□□□□□ -0.57
ECM1-201ENST00000346569 ANKRD7Q92527 254 aa11.52□□□□□ -0.57
ECM1-201ENST00000346569 NDRG1Q92597 394 aaKnown RBP11.52□□□□□ -0.57
ECM1-201ENST00000346569 BADQ92934 168 aa11.52□□□□□ -0.57
ECM1-201ENST00000346569 NT5C3BQ969T7 300 aa11.52□□□□□ -0.57
ECM1-201ENST00000346569 FUBP3Q96I24 572 aaKnown RBP eCLIP11.52□□□□□ -0.57
ECM1-201ENST00000346569 NAP1L3Q99457 506 aaPredicted RBP11.52□□□□□ -0.57
ECM1-201ENST00000346569 TTPALQ9BTX7 342 aa11.52□□□□□ -0.57
ECM1-201ENST00000346569 VN1R3Q9BXE9 311 aa11.52□□□□□ -0.57
ECM1-201ENST00000346569 OXCT2Q9BYC2 517 aaPredicted RBP11.52□□□□□ -0.57
ECM1-201ENST00000346569 RHOBTB2Q9BYZ6 727 aa11.52□□□□□ -0.57
ECM1-201ENST00000346569 LRRC4Q9HBW1 653 aa11.52□□□□□ -0.57
ECM1-201ENST00000346569 CNGB3Q9NQW8 809 aa11.52□□□□□ -0.57
ECM1-201ENST00000346569 TSC2P49815 1807 aa11.51□□□□□ -0.57
ECM1-201ENST00000346569 CCDC188H7C350 402 aa11.51□□□□□ -0.57
ECM1-201ENST00000346569 H7C4K7 107 aa11.51□□□□□ -0.57
ECM1-201ENST00000346569 KRIT1O00522 736 aa11.51□□□□□ -0.57
ECM1-201ENST00000346569 RNF8O76064 485 aa11.51□□□□□ -0.57
ECM1-201ENST00000346569 FYNP06241 537 aa11.51□□□□□ -0.57
ECM1-201ENST00000346569 OR4Q2P0C623 313 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms