RNA–Protein interactions for RNA: ENST00000346416.6

CDK5RAP1-202, Transcript of CDK5 regulatory subunit associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP1, Length 2,122 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1-202ENST00000346416 SLC35B2Q8TB61 432 aa14.8□□□□□ -0.04
CDK5RAP1-202ENST00000346416 ACTL9Q8TC94 416 aa14.8□□□□□ -0.04
CDK5RAP1-202ENST00000346416 CCHCR1Q8TD31 782 aa14.8□□□□□ -0.04
CDK5RAP1-202ENST00000346416 SLC2A14Q8TDB8 520 aa14.8□□□□□ -0.04
CDK5RAP1-202ENST00000346416 TMEM121Q9BTD3 319 aa14.8□□□□□ -0.04
CDK5RAP1-202ENST00000346416 CALN1Q9BXU9 219 aa14.8□□□□□ -0.04
CDK5RAP1-202ENST00000346416 CDC42EP4Q9H3Q1 356 aaKnown RBP14.8□□□□□ -0.04
CDK5RAP1-202ENST00000346416 CHST12Q9NRB3 414 aa14.8□□□□□ -0.04
CDK5RAP1-202ENST00000346416 PRPSAP2O60256 369 aa14.79□□□□□ -0.04
CDK5RAP1-202ENST00000346416 ITGAVP06756 1048 aa14.79□□□□□ -0.04
CDK5RAP1-202ENST00000346416 PRKAR2AP13861 404 aaKnown RBP14.79□□□□□ -0.04
CDK5RAP1-202ENST00000346416 ETS1P14921 441 aa14.79□□□□□ -0.04
CDK5RAP1-202ENST00000346416 ELNP15502 786 aa14.79□□□□□ -0.04
CDK5RAP1-202ENST00000346416 IGFBP6P24592 240 aaPredicted RBP14.79□□□□□ -0.04
CDK5RAP1-202ENST00000346416 ARSEP51690 589 aa14.79□□□□□ -0.04
CDK5RAP1-202ENST00000346416 AFF1P51825 1210 aaKnown RBP14.79□□□□□ -0.04
CDK5RAP1-202ENST00000346416 OTUD4Q01804 1114 aaKnown RBP14.79□□□□□ -0.04
CDK5RAP1-202ENST00000346416 MGAT3Q09327 533 aa14.79□□□□□ -0.04
CDK5RAP1-202ENST00000346416 HOOK3Q86VS8 718 aa14.79□□□□□ -0.04
CDK5RAP1-202ENST00000346416 ZDHHC17Q8IUH5 632 aa14.79□□□□□ -0.04
CDK5RAP1-202ENST00000346416 PKNOX2Q96KN3 472 aa14.79□□□□□ -0.04
CDK5RAP1-202ENST00000346416 TNIP3Q96KP6 325 aa14.79□□□□□ -0.04
CDK5RAP1-202ENST00000346416 GAD1Q99259 594 aa14.79□□□□□ -0.04
CDK5RAP1-202ENST00000346416 TSPYL2Q9H2G4 693 aaPredicted RBP14.79□□□□□ -0.04
CDK5RAP1-202ENST00000346416 AGO3Q9H9G7 860 aaKnown RBP14.79□□□□□ -0.04
CDK5RAP1-202ENST00000346416 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.79□□□□□ -0.04
CDK5RAP1-202ENST00000346416 DNAJC17Q9NVM6 304 aaKnown RBP14.79□□□□□ -0.04
CDK5RAP1-202ENST00000346416 CACNG4Q9UBN1 327 aa14.79□□□□□ -0.04
CDK5RAP1-202ENST00000346416 NOVA2Q9UNW9 492 aaKnown RBP14.79□□□□□ -0.04
CDK5RAP1-202ENST00000346416 DPYSL4O14531 572 aa14.78□□□□□ -0.04
CDK5RAP1-202ENST00000346416 CYB561D2O14569 222 aa14.78□□□□□ -0.04
CDK5RAP1-202ENST00000346416 CAND2O75155 1236 aa14.78□□□□□ -0.04
CDK5RAP1-202ENST00000346416 SDC4P31431 198 aa14.78□□□□□ -0.04
CDK5RAP1-202ENST00000346416 THPOP40225 353 aa14.78□□□□□ -0.04
CDK5RAP1-202ENST00000346416 GNGT1P63211 74 aa14.78□□□□□ -0.04
CDK5RAP1-202ENST00000346416 RPAINQ86UA6 219 aa14.78□□□□□ -0.04
CDK5RAP1-202ENST00000346416 OSTM1Q86WC4 334 aa14.78□□□□□ -0.04
CDK5RAP1-202ENST00000346416 RFX6Q8HWS3 928 aa14.78□□□□□ -0.04
CDK5RAP1-202ENST00000346416 TTC13Q8NBP0 860 aa14.78□□□□□ -0.04
CDK5RAP1-202ENST00000346416 B3GALNT2Q8NCR0 500 aa14.78□□□□□ -0.04
CDK5RAP1-202ENST00000346416 CLEC4CQ8WTT0 213 aa14.78□□□□□ -0.04
CDK5RAP1-202ENST00000346416 LPPQ93052 612 aa14.78□□□□□ -0.04
CDK5RAP1-202ENST00000346416 PWWP2AQ96N64 755 aa14.78□□□□□ -0.04
CDK5RAP1-202ENST00000346416 OSBPL7Q9BZF2 842 aa14.78□□□□□ -0.04
CDK5RAP1-202ENST00000346416 DNAI2Q9GZS0 605 aa14.78□□□□□ -0.04
CDK5RAP1-202ENST00000346416 ADAM7Q9H2U9 754 aa14.78□□□□□ -0.04
CDK5RAP1-202ENST00000346416 NGRNQ9NPE2 291 aaKnown RBP14.78□□□□□ -0.04
CDK5RAP1-202ENST00000346416 SLC38A7Q9NVC3 462 aa14.78□□□□□ -0.04
CDK5RAP1-202ENST00000346416 RNF186Q9NXI6 227 aa14.78□□□□□ -0.04
CDK5RAP1-202ENST00000346416 GRIN2DO15399 1336 aa14.78□□□□□ -0.04
CDK5RAP1-202ENST00000346416 DCDC2CA8MYV0 355 aa14.78□□□□□ -0.04
CDK5RAP1-202ENST00000346416 SGK1O00141 431 aa14.78□□□□□ -0.04
CDK5RAP1-202ENST00000346416 GPR182O15218 404 aa14.78□□□□□ -0.04
CDK5RAP1-202ENST00000346416 WARSP23381 471 aaKnown RBP14.78□□□□□ -0.04
CDK5RAP1-202ENST00000346416 CDH6P55285 790 aa14.78□□□□□ -0.04
CDK5RAP1-202ENST00000346416 PTGISQ16647 500 aa14.78□□□□□ -0.04
CDK5RAP1-202ENST00000346416 ZSCAN26Q16670 478 aa14.78□□□□□ -0.04
CDK5RAP1-202ENST00000346416 HIBCHQ6NVY1 386 aaPredicted RBP14.78□□□□□ -0.04
CDK5RAP1-202ENST00000346416 SCYL2Q6P3W7 929 aa14.78□□□□□ -0.04
CDK5RAP1-202ENST00000346416 LRRC31Q6UY01 552 aa14.78□□□□□ -0.04
CDK5RAP1-202ENST00000346416 HACE1Q8IYU2 909 aa14.78□□□□□ -0.04
CDK5RAP1-202ENST00000346416 SMC1BQ8NDV3 1235 aa14.78□□□□□ -0.04
CDK5RAP1-202ENST00000346416 KLHDC9Q8NEP7 349 aa14.78□□□□□ -0.04
CDK5RAP1-202ENST00000346416 FAM172AQ8WUF8 416 aa14.78□□□□□ -0.04
CDK5RAP1-202ENST00000346416 DDX23Q9BUQ8 820 aaKnown RBP14.78□□□□□ -0.04
CDK5RAP1-202ENST00000346416 RSAD1Q9HA92 442 aa14.78□□□□□ -0.04
CDK5RAP1-202ENST00000346416 CASP8AP2Q9UKL3 1982 aa14.78□□□□□ -0.04
CDK5RAP1-202ENST00000346416 TLDC2A0PJX2 215 aa14.77□□□□□ -0.04
CDK5RAP1-202ENST00000346416 A6NNZ2 444 aa14.77□□□□□ -0.04
CDK5RAP1-202ENST00000346416 AOC2O75106 756 aa14.77□□□□□ -0.04
CDK5RAP1-202ENST00000346416 ATP2C2O75185 946 aa14.77□□□□□ -0.04
CDK5RAP1-202ENST00000346416 ENDOD1O94919 500 aa14.77□□□□□ -0.04
CDK5RAP1-202ENST00000346416 ACSL3O95573 720 aa14.77□□□□□ -0.04
CDK5RAP1-202ENST00000346416 IFNB1P01574 187 aa14.77□□□□□ -0.04
CDK5RAP1-202ENST00000346416 RPLP2P05387 115 aaKnown RBP14.77□□□□□ -0.04
CDK5RAP1-202ENST00000346416 THP07101 528 aa14.77□□□□□ -0.04
CDK5RAP1-202ENST00000346416 LCP1P13796 627 aa14.77□□□□□ -0.04
CDK5RAP1-202ENST00000346416 TKTP29401 623 aaKnown RBP14.77□□□□□ -0.04
CDK5RAP1-202ENST00000346416 RPL34P49207 117 aaKnown RBP14.77□□□□□ -0.04
CDK5RAP1-202ENST00000346416 MAGOHP61326 146 aaKnown RBP14.77□□□□□ -0.04
CDK5RAP1-202ENST00000346416 GPS1Q13098 491 aa14.77□□□□□ -0.04
CDK5RAP1-202ENST00000346416 MMRN1Q13201 1228 aa14.77□□□□□ -0.04
CDK5RAP1-202ENST00000346416 NOGQ13253 232 aa14.77□□□□□ -0.04
CDK5RAP1-202ENST00000346416 CCDC142Q17RM4 750 aa14.77□□□□□ -0.04
CDK5RAP1-202ENST00000346416 TUBB8Q3ZCM7 444 aa14.77□□□□□ -0.04
CDK5RAP1-202ENST00000346416 WSCD1Q658N2 575 aa14.77□□□□□ -0.04
CDK5RAP1-202ENST00000346416 CCSAPQ6IQ19 270 aaPredicted RBP14.77□□□□□ -0.04
CDK5RAP1-202ENST00000346416 FRMD8P1Q9BZ68 369 aaPredicted RBP14.77□□□□□ -0.04
CDK5RAP1-202ENST00000346416 MIOSQ9NXC5 875 aa14.77□□□□□ -0.04
CDK5RAP1-202ENST00000346416 ARL5CA6NH57 179 aa14.77□□□□□ -0.05
CDK5RAP1-202ENST00000346416 SMIM23A6NLE4 172 aa14.77□□□□□ -0.05
CDK5RAP1-202ENST00000346416 APOC4-APOC2K7ER74 178 aa14.77□□□□□ -0.05
CDK5RAP1-202ENST00000346416 DNALI1O14645 258 aaPredicted RBP14.77□□□□□ -0.05
CDK5RAP1-202ENST00000346416 APOC2P02655 101 aa14.77□□□□□ -0.05
CDK5RAP1-202ENST00000346416 ACAT1P24752 427 aaKnown RBP14.77□□□□□ -0.05
CDK5RAP1-202ENST00000346416 GUCY1A3Q02108 690 aa14.77□□□□□ -0.05
CDK5RAP1-202ENST00000346416 SP3Q02447 781 aa14.77□□□□□ -0.05
CDK5RAP1-202ENST00000346416 BOLA3Q53S33 107 aa14.77□□□□□ -0.05
CDK5RAP1-202ENST00000346416 AGMOQ6ZNB7 445 aa14.77□□□□□ -0.05
CDK5RAP1-202ENST00000346416 SLC26A9Q7LBE3 791 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms