RNA–Protein interactions for RNA: ENST00000344376.9

ATG4B-201, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 1,566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-201ENST00000344376 COL4A2P08572 1712 aa17.03■□□□□ 0.32
ATG4B-201ENST00000344376 PTPRDP23468 1912 aa17.03■□□□□ 0.32
ATG4B-201ENST00000344376 TICRRQ7Z2Z1 1910 aa17.03■□□□□ 0.32
ATG4B-201ENST00000344376 SHISA7A6NL88 538 aa17.03■□□□□ 0.32
ATG4B-201ENST00000344376 ADORA2BP29275 332 aa17.03■□□□□ 0.32
ATG4B-201ENST00000344376 NBL1P41271 181 aa17.03■□□□□ 0.32
ATG4B-201ENST00000344376 SOX9P48436 509 aa17.03■□□□□ 0.32
ATG4B-201ENST00000344376 SLC5A3P53794 718 aa17.03■□□□□ 0.32
ATG4B-201ENST00000344376 AMPD2Q01433 879 aa17.03■□□□□ 0.32
ATG4B-201ENST00000344376 USP4Q13107 963 aa17.03■□□□□ 0.32
ATG4B-201ENST00000344376 C12orf29Q8N999 325 aa17.03■□□□□ 0.32
ATG4B-201ENST00000344376 SLC35C1Q96A29 364 aa17.03■□□□□ 0.32
ATG4B-201ENST00000344376 TWNKQ96RR1 684 aa17.03■□□□□ 0.32
ATG4B-201ENST00000344376 SLC22A12Q96S37 553 aa17.03■□□□□ 0.32
ATG4B-201ENST00000344376 FAM83CQ9BQN1 747 aa17.03■□□□□ 0.32
ATG4B-201ENST00000344376 PPP1R3GB7ZBB8 358 aa17.02■□□□□ 0.32
ATG4B-201ENST00000344376 IFNAR2P48551 515 aa17.02■□□□□ 0.32
ATG4B-201ENST00000344376 PAK1Q13153 545 aa17.02■□□□□ 0.32
ATG4B-201ENST00000344376 RUNX3Q13761 415 aa17.02■□□□□ 0.32
ATG4B-201ENST00000344376 ZNF77Q15935 545 aa17.02■□□□□ 0.32
ATG4B-201ENST00000344376 CBWD6Q4V339 395 aa17.02■□□□□ 0.32
ATG4B-201ENST00000344376 CBWD3Q5JTY5 395 aa17.02■□□□□ 0.32
ATG4B-201ENST00000344376 CBWD5Q5RIA9 395 aa17.02■□□□□ 0.32
ATG4B-201ENST00000344376 TTI2Q6NXR4 508 aa17.02■□□□□ 0.32
ATG4B-201ENST00000344376 ZC3H14Q6PJT7 736 aaKnown RBP17.02■□□□□ 0.32
ATG4B-201ENST00000344376 SH3RF2Q8TEC5 729 aa17.02■□□□□ 0.32
ATG4B-201ENST00000344376 CYFIP2Q96F07 1278 aa17.02■□□□□ 0.32
ATG4B-201ENST00000344376 HNRNPABQ99729 332 aaKnown RBP17.02■□□□□ 0.32
ATG4B-201ENST00000344376 EBF3Q9H4W6 596 aa17.02■□□□□ 0.32
ATG4B-201ENST00000344376 LMAN1LQ9HAT1 526 aa17.02■□□□□ 0.32
ATG4B-201ENST00000344376 DUS2Q9NX74 493 aaKnown RBP17.02■□□□□ 0.32
ATG4B-201ENST00000344376 COQ4Q9Y3A0 265 aa17.02■□□□□ 0.32
ATG4B-201ENST00000344376 MIA3Q5JRA6 1907 aa17.02■□□□□ 0.32
ATG4B-201ENST00000344376 PROB1E7EW31 1015 aa17.02■□□□□ 0.31
ATG4B-201ENST00000344376 GNA14O95837 355 aa17.02■□□□□ 0.31
ATG4B-201ENST00000344376 TCF3P15923 654 aa17.02■□□□□ 0.31
ATG4B-201ENST00000344376 BMP6P22004 513 aa17.02■□□□□ 0.31
ATG4B-201ENST00000344376 MAP3K7CLP57077 242 aa17.02■□□□□ 0.31
ATG4B-201ENST00000344376 YWHAEP62258 255 aaKnown RBP17.02■□□□□ 0.31
ATG4B-201ENST00000344376 CETN1Q12798 172 aa17.02■□□□□ 0.31
ATG4B-201ENST00000344376 CAMK4Q16566 473 aa17.02■□□□□ 0.31
ATG4B-201ENST00000344376 ZNF687Q8N1G0 1237 aa17.02■□□□□ 0.31
ATG4B-201ENST00000344376 CPA6Q8N4T0 437 aa17.02■□□□□ 0.31
ATG4B-201ENST00000344376 OSCP1Q8WVF1 389 aa17.02■□□□□ 0.31
ATG4B-201ENST00000344376 ATP2A3Q93084 1043 aa17.02■□□□□ 0.31
ATG4B-201ENST00000344376 EXOC4Q96A65 974 aa17.02■□□□□ 0.31
ATG4B-201ENST00000344376 SMOQ99835 787 aa17.02■□□□□ 0.31
ATG4B-201ENST00000344376 DUSP9Q99956 384 aaKnown RBP17.02■□□□□ 0.31
ATG4B-201ENST00000344376 CHRDQ9H2X0 955 aa17.02■□□□□ 0.31
ATG4B-201ENST00000344376 FBXO44Q9H4M3 255 aa17.02■□□□□ 0.31
ATG4B-201ENST00000344376 CSNK1G1Q9HCP0 422 aa17.02■□□□□ 0.31
ATG4B-201ENST00000344376 CISHQ9NSE2 258 aa17.02■□□□□ 0.31
ATG4B-201ENST00000344376 KIAA1468Q9P260 1216 aa17.02■□□□□ 0.31
ATG4B-201ENST00000344376 FBXO4Q9UKT5 387 aa17.02■□□□□ 0.31
ATG4B-201ENST00000344376 OBSL1O75147 1896 aa17.02■□□□□ 0.31
ATG4B-201ENST00000344376 PIEZO1Q92508 2521 aa17.01■□□□□ 0.31
ATG4B-201ENST00000344376 TNFRSF10BO14763 440 aa17.01■□□□□ 0.31
ATG4B-201ENST00000344376 FGFR1OPO95684 399 aaKnown RBP17.01■□□□□ 0.31
ATG4B-201ENST00000344376 SP9P0CG40 484 aa17.01■□□□□ 0.31
ATG4B-201ENST00000344376 SLC7A9P82251 487 aa17.01■□□□□ 0.31
ATG4B-201ENST00000344376 PPP2R5DQ14738 602 aa17.01■□□□□ 0.31
ATG4B-201ENST00000344376 ZNF394Q53GI3 561 aa17.01■□□□□ 0.31
ATG4B-201ENST00000344376 DGKKQ5KSL6 1271 aa17.01■□□□□ 0.31
ATG4B-201ENST00000344376 TRIM68Q6AZZ1 485 aa17.01■□□□□ 0.31
ATG4B-201ENST00000344376 DDX42Q86XP3 938 aaKnown RBP eCLIP17.01■□□□□ 0.31
ATG4B-201ENST00000344376 SCAMP5Q8TAC9 235 aa17.01■□□□□ 0.31
ATG4B-201ENST00000344376 WHAMMQ8TF30 809 aa17.01■□□□□ 0.31
ATG4B-201ENST00000344376 HEXIM2Q96MH2 286 aaKnown RBP17.01■□□□□ 0.31
ATG4B-201ENST00000344376 HPS4Q9NQG7 708 aa17.01■□□□□ 0.31
ATG4B-201ENST00000344376 DENND4CQ5VZ89 1909 aa17■□□□□ 0.31
ATG4B-201ENST00000344376 OAS1P00973 400 aaKnown RBP17■□□□□ 0.31
ATG4B-201ENST00000344376 MBL2P11226 248 aaPredicted RBP17■□□□□ 0.31
ATG4B-201ENST00000344376 CHRNB1P11230 501 aa17■□□□□ 0.31
ATG4B-201ENST00000344376 FMO5P49326 533 aa17■□□□□ 0.31
ATG4B-201ENST00000344376 STX17P56962 302 aa17■□□□□ 0.31
ATG4B-201ENST00000344376 FZD5Q13467 585 aa17■□□□□ 0.31
ATG4B-201ENST00000344376 PON2Q15165 354 aa17■□□□□ 0.31
ATG4B-201ENST00000344376 ZNF528Q3MIS6 628 aa17■□□□□ 0.31
ATG4B-201ENST00000344376 HECTD3Q5T447 861 aa17■□□□□ 0.31
ATG4B-201ENST00000344376 TXNDC11Q6PKC3 985 aa17■□□□□ 0.31
ATG4B-201ENST00000344376 ZMIZ2Q8NF64 920 aa17■□□□□ 0.31
ATG4B-201ENST00000344376 RIN3Q8TB24 985 aa17■□□□□ 0.31
ATG4B-201ENST00000344376 NKD2Q969F2 451 aaPredicted RBP17■□□□□ 0.31
ATG4B-201ENST00000344376 TMEM176AQ96HP8 235 aa17■□□□□ 0.31
ATG4B-201ENST00000344376 PNPLA8Q9NP80 782 aa17■□□□□ 0.31
ATG4B-201ENST00000344376 IL37Q9NZH6 218 aa17■□□□□ 0.31
ATG4B-201ENST00000344376 CPQQ9Y646 472 aa17■□□□□ 0.31
ATG4B-201ENST00000344376 WNT6Q9Y6F9 365 aa17■□□□□ 0.31
ATG4B-201ENST00000344376 LEFTY2O00292 366 aa16.99■□□□□ 0.31
ATG4B-201ENST00000344376 GFRA3O60609 400 aa16.99■□□□□ 0.31
ATG4B-201ENST00000344376 BEST1O76090 585 aa16.99■□□□□ 0.31
ATG4B-201ENST00000344376 NFATC1O95644 943 aa16.99■□□□□ 0.31
ATG4B-201ENST00000344376 OLFM2O95897 454 aa16.99■□□□□ 0.31
ATG4B-201ENST00000344376 ARSAP15289 507 aa16.99■□□□□ 0.31
ATG4B-201ENST00000344376 TBXAS1P24557 533 aaPredicted RBP16.99■□□□□ 0.31
ATG4B-201ENST00000344376 TUBP50607 506 aa16.99■□□□□ 0.31
ATG4B-201ENST00000344376 CSTF1Q05048 431 aaKnown RBP16.99■□□□□ 0.31
ATG4B-201ENST00000344376 MTAPQ13126 283 aa16.99■□□□□ 0.31
ATG4B-201ENST00000344376 NR1H3Q13133 447 aa16.99■□□□□ 0.31
ATG4B-201ENST00000344376 CUL2Q13617 745 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms