RNA–Protein interactions for RNA: ENST00000344114.8

HERPUD1-202, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best) BASIC

Gene HERPUD1, Length 1,388 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-202ENST00000344114 NPTXRO95502 500 aa14.29□□□□□ -0.12
HERPUD1-202ENST00000344114 MMEP08473 750 aa14.29□□□□□ -0.12
HERPUD1-202ENST00000344114 ATICP31939 592 aa14.29□□□□□ -0.12
HERPUD1-202ENST00000344114 NOP2P46087 812 aaKnown RBP14.29□□□□□ -0.12
HERPUD1-202ENST00000344114 HADHBP55084 474 aaKnown RBP14.29□□□□□ -0.12
HERPUD1-202ENST00000344114 MYL6P60660 151 aa14.29□□□□□ -0.12
HERPUD1-202ENST00000344114 TCEAL1Q15170 157 aa14.29□□□□□ -0.12
HERPUD1-202ENST00000344114 RSPO4Q2I0M5 234 aaPredicted RBP14.29□□□□□ -0.12
HERPUD1-202ENST00000344114 SLC10A6Q3KNW5 377 aa14.29□□□□□ -0.12
HERPUD1-202ENST00000344114 USP41Q3LFD5 358 aa14.29□□□□□ -0.12
HERPUD1-202ENST00000344114 TAF3Q5VWG9 929 aa14.29□□□□□ -0.12
HERPUD1-202ENST00000344114 JADE1Q6IE81 842 aa14.29□□□□□ -0.12
HERPUD1-202ENST00000344114 PPP1R2P3Q6NXS1 205 aa14.29□□□□□ -0.12
HERPUD1-202ENST00000344114 TRIM72Q6ZMU5 477 aa14.29□□□□□ -0.12
HERPUD1-202ENST00000344114 SYCE1Q8N0S2 351 aa14.29□□□□□ -0.12
HERPUD1-202ENST00000344114 GOLGA1Q92805 767 aa14.29□□□□□ -0.12
HERPUD1-202ENST00000344114 FGF14Q92915 247 aa14.29□□□□□ -0.12
HERPUD1-202ENST00000344114 B3GALT6Q96L58 329 aa14.29□□□□□ -0.12
HERPUD1-202ENST00000344114 RPP25Q9BUL9 199 aaKnown RBP14.29□□□□□ -0.12
HERPUD1-202ENST00000344114 COLEC11Q9BWP8 271 aa14.29□□□□□ -0.12
HERPUD1-202ENST00000344114 PLEKHA5Q9HAU0 1116 aa14.29□□□□□ -0.12
HERPUD1-202ENST00000344114 FBXO4Q9UKT5 387 aa14.29□□□□□ -0.12
HERPUD1-202ENST00000344114 ITGA11Q9UKX5 1188 aa14.29□□□□□ -0.12
HERPUD1-202ENST00000344114 GIT1Q9Y2X7 761 aa14.29□□□□□ -0.12
HERPUD1-202ENST00000344114 NOTCH4Q99466 2003 aa14.28□□□□□ -0.12
HERPUD1-202ENST00000344114 KANSL1LA0AUZ9 987 aa14.28□□□□□ -0.12
HERPUD1-202ENST00000344114 CTAGE15A4D2H0 777 aa14.28□□□□□ -0.12
HERPUD1-202ENST00000344114 TMCO5BA8MYB1 307 aa14.28□□□□□ -0.12
HERPUD1-202ENST00000344114 CST3P01034 146 aaPredicted RBP14.28□□□□□ -0.12
HERPUD1-202ENST00000344114 CTAGE8P0CG41 777 aa14.28□□□□□ -0.12
HERPUD1-202ENST00000344114 GPC5P78333 572 aa14.28□□□□□ -0.12
HERPUD1-202ENST00000344114 CREMQ03060 361 aa14.28□□□□□ -0.12
HERPUD1-202ENST00000344114 MEI1Q5TIA1 1274 aa14.28□□□□□ -0.12
HERPUD1-202ENST00000344114 TMEM270Q6UE05 265 aa14.28□□□□□ -0.12
HERPUD1-202ENST00000344114 PARM1Q6UWI2 310 aa14.28□□□□□ -0.12
HERPUD1-202ENST00000344114 CTAGE6Q86UF2 777 aa14.28□□□□□ -0.12
HERPUD1-202ENST00000344114 CTAGE4Q8IX94 777 aa14.28□□□□□ -0.12
HERPUD1-202ENST00000344114 C1orf127Q8N9H9 656 aa14.28□□□□□ -0.12
HERPUD1-202ENST00000344114 RBBP8NLQ8NC74 664 aaPredicted RBP14.28□□□□□ -0.12
HERPUD1-202ENST00000344114 LRRN4CLQ8ND94 238 aa14.28□□□□□ -0.12
HERPUD1-202ENST00000344114 GSTCDQ8NEC7 633 aa14.28□□□□□ -0.12
HERPUD1-202ENST00000344114 TPCN2Q8NHX9 752 aa14.28□□□□□ -0.12
HERPUD1-202ENST00000344114 UBXN4Q92575 508 aa14.28□□□□□ -0.12
HERPUD1-202ENST00000344114 ELMO3Q96BJ8 720 aa14.28□□□□□ -0.12
HERPUD1-202ENST00000344114 ZFP42Q96MM3 310 aa14.28□□□□□ -0.12
HERPUD1-202ENST00000344114 CNTNAP3BQ96NU0 1288 aa14.28□□□□□ -0.12
HERPUD1-202ENST00000344114 TSPAN18Q96SJ8 248 aa14.28□□□□□ -0.12
HERPUD1-202ENST00000344114 CNTNAP3Q9BZ76 1288 aa14.28□□□□□ -0.12
HERPUD1-202ENST00000344114 OSBPL6Q9BZF3 934 aa14.28□□□□□ -0.12
HERPUD1-202ENST00000344114 XYLT2Q9H1B5 865 aa14.28□□□□□ -0.12
HERPUD1-202ENST00000344114 FAM124BQ9H5Z6 455 aaPredicted RBP14.28□□□□□ -0.12
HERPUD1-202ENST00000344114 VRTNQ9H8Y1 702 aa14.28□□□□□ -0.12
HERPUD1-202ENST00000344114 TAS2R14Q9NYV8 317 aa14.28□□□□□ -0.12
HERPUD1-202ENST00000344114 ADAM28Q9UKQ2 775 aa14.28□□□□□ -0.12
HERPUD1-202ENST00000344114 HES2Q9Y543 173 aa14.28□□□□□ -0.12
HERPUD1-202ENST00000344114 KMT2BQ9UMN6 2715 aaPredicted RBP14.28□□□□□ -0.12
HERPUD1-202ENST00000344114 TSC2P49815 1807 aa14.28□□□□□ -0.12
HERPUD1-202ENST00000344114 NCOR2Q9Y618 2525 aa14.27□□□□□ -0.12
HERPUD1-202ENST00000344114 MEFVO15553 781 aaPredicted RBP14.27□□□□□ -0.12
HERPUD1-202ENST00000344114 STAU1O95793 577 aaKnown RBP14.27□□□□□ -0.12
HERPUD1-202ENST00000344114 FTLP02792 175 aaPredicted RBP14.27□□□□□ -0.12
HERPUD1-202ENST00000344114 P4HA1P13674 534 aa14.27□□□□□ -0.12
HERPUD1-202ENST00000344114 ABCB4P21439 1286 aa14.27□□□□□ -0.12
HERPUD1-202ENST00000344114 FSHRP23945 695 aa14.27□□□□□ -0.12
HERPUD1-202ENST00000344114 GNA15P30679 374 aa14.27□□□□□ -0.12
HERPUD1-202ENST00000344114 ZNF132P52740 706 aa14.27□□□□□ -0.12
HERPUD1-202ENST00000344114 YARSP54577 528 aaKnown RBP14.27□□□□□ -0.12
HERPUD1-202ENST00000344114 PRKCQQ04759 706 aa14.27□□□□□ -0.12
HERPUD1-202ENST00000344114 CLEC16AQ2KHT3 1053 aa14.27□□□□□ -0.12
HERPUD1-202ENST00000344114 ZNF667Q5HYK9 610 aa14.27□□□□□ -0.12
HERPUD1-202ENST00000344114 VARS2Q5ST30 1063 aaKnown RBP14.27□□□□□ -0.12
HERPUD1-202ENST00000344114 RSRC2Q7L4I2 434 aaKnown RBP14.27□□□□□ -0.12
HERPUD1-202ENST00000344114 GPR161Q8N6U8 529 aaKnown RBP14.27□□□□□ -0.12
HERPUD1-202ENST00000344114 LRRC57Q8N9N7 239 aa14.27□□□□□ -0.12
HERPUD1-202ENST00000344114 ST13P5Q8NFI4 369 aaPredicted RBP14.27□□□□□ -0.12
HERPUD1-202ENST00000344114 UBE2Q2Q8WVN8 375 aa14.27□□□□□ -0.12
HERPUD1-202ENST00000344114 ANKRD7Q92527 254 aa14.27□□□□□ -0.12
HERPUD1-202ENST00000344114 TRIM11Q96F44 468 aa14.27□□□□□ -0.12
HERPUD1-202ENST00000344114 OSBPL9Q96SU4 736 aa14.27□□□□□ -0.12
HERPUD1-202ENST00000344114 PCDHB18PQ96TA0 734 aa14.27□□□□□ -0.12
HERPUD1-202ENST00000344114 TLR10Q9BXR5 811 aa14.27□□□□□ -0.12
HERPUD1-202ENST00000344114 TRIM6Q9C030 488 aaPredicted RBP14.27□□□□□ -0.12
HERPUD1-202ENST00000344114 THAP2Q9H0W7 228 aa14.27□□□□□ -0.12
HERPUD1-202ENST00000344114 SIX4Q9UIU6 781 aa14.27□□□□□ -0.12
HERPUD1-202ENST00000344114 FBXW11Q9UKB1 542 aa14.27□□□□□ -0.12
HERPUD1-202ENST00000344114 GTF3C4Q9UKN8 822 aa14.27□□□□□ -0.12
HERPUD1-202ENST00000344114 CDH7Q9ULB5 785 aa14.27□□□□□ -0.12
HERPUD1-202ENST00000344114 PCDHGA2Q9Y5H1 932 aa14.27□□□□□ -0.12
HERPUD1-202ENST00000344114 VWA8A3KMH1 1905 aa14.27□□□□□ -0.13
HERPUD1-202ENST00000344114 CACNA1BQ00975 2339 aa14.26□□□□□ -0.13
HERPUD1-202ENST00000344114 CES2O00748 559 aa14.26□□□□□ -0.13
HERPUD1-202ENST00000344114 LAMTOR5O43504 91 aa14.26□□□□□ -0.13
HERPUD1-202ENST00000344114 MTA2O94776 668 aa14.26□□□□□ -0.13
HERPUD1-202ENST00000344114 ITGB3P05106 788 aa14.26□□□□□ -0.13
HERPUD1-202ENST00000344114 KRT19P08727 400 aa14.26□□□□□ -0.13
HERPUD1-202ENST00000344114 HNRNPA1P09651 372 aaKnown RBP eCLIP14.26□□□□□ -0.13
HERPUD1-202ENST00000344114 RPL17P18621 184 aaKnown RBP14.26□□□□□ -0.13
HERPUD1-202ENST00000344114 SDHBP21912 280 aa14.26□□□□□ -0.13
HERPUD1-202ENST00000344114 MAGEA9P43362 315 aa14.26□□□□□ -0.13
HERPUD1-202ENST00000344114 ASPAP45381 313 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms