RNA–Protein interactions for RNA: ENST00000344113.8

SYNE2-202, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE2, Length 21,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-202ENST00000344113 AGAP9Q5VTM2 703 aa3.89□□□□□ -1.79
SYNE2-202ENST00000344113 TMEM17Q86X19 198 aa3.89□□□□□ -1.79
SYNE2-202ENST00000344113 NME9Q86XW9 330 aa3.89□□□□□ -1.79
SYNE2-202ENST00000344113 SETD6Q8TBK2 473 aa3.89□□□□□ -1.79
SYNE2-202ENST00000344113 GPRASP2Q96D09 838 aa3.89□□□□□ -1.79
SYNE2-202ENST00000344113 PA2G4Q9UQ80 394 aaKnown RBP3.89□□□□□ -1.79
SYNE2-202ENST00000344113 A3GALT2U3KPV4 340 aa3.89□□□□□ -1.79
SYNE2-202ENST00000344113 TPBGLP0DKB5 382 aa3.89□□□□□ -1.79
SYNE2-202ENST00000344113 RASA1P20936 1047 aa3.89□□□□□ -1.79
SYNE2-202ENST00000344113 TSPAN5P62079 268 aa3.89□□□□□ -1.79
SYNE2-202ENST00000344113 TMPRSS15P98073 1019 aa3.89□□□□□ -1.79
SYNE2-202ENST00000344113 RELQ04864 619 aaPredicted RBP3.89□□□□□ -1.79
SYNE2-202ENST00000344113 ORC2Q13416 577 aaPredicted RBP3.89□□□□□ -1.79
SYNE2-202ENST00000344113 SMAD1Q15797 465 aaKnown RBP3.89□□□□□ -1.79
SYNE2-202ENST00000344113 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP3.89□□□□□ -1.79
SYNE2-202ENST00000344113 SETD9Q8NE22 299 aa3.89□□□□□ -1.79
SYNE2-202ENST00000344113 SNX12Q9UMY4 172 aa3.89□□□□□ -1.79
SYNE2-202ENST00000344113 MYRFQ9Y2G1 1151 aa3.89□□□□□ -1.79
SYNE2-202ENST00000344113 CPDO75976 1380 aa3.89□□□□□ -1.79
SYNE2-202ENST00000344113 CDC25CP30307 473 aa3.89□□□□□ -1.79
SYNE2-202ENST00000344113 LIN54Q6MZP7 749 aa3.89□□□□□ -1.79
SYNE2-202ENST00000344113 SPATA4Q8NEY3 305 aa3.89□□□□□ -1.79
SYNE2-202ENST00000344113 OR4C6Q8NH72 309 aa3.89□□□□□ -1.79
SYNE2-202ENST00000344113 DNAJA4Q8WW22 397 aaPredicted RBP3.89□□□□□ -1.79
SYNE2-202ENST00000344113 ARHGEF26Q96DR7 871 aa3.89□□□□□ -1.79
SYNE2-202ENST00000344113 PRAM1Q96QH2 718 aa3.89□□□□□ -1.79
SYNE2-202ENST00000344113 MTMR6Q9Y217 621 aa3.89□□□□□ -1.79
SYNE2-202ENST00000344113 RUVBL1Q9Y265 456 aaKnown RBP3.89□□□□□ -1.79
SYNE2-202ENST00000344113 CFL2Q9Y281 166 aa3.89□□□□□ -1.79
SYNE2-202ENST00000344113 INPP5FQ9Y2H2 1132 aa3.89□□□□□ -1.79
SYNE2-202ENST00000344113 CDY1Q9Y6F8 540 aa3.89□□□□□ -1.79
SYNE2-202ENST00000344113 OVOS2A0A0G2JMS6 1433 aa3.89□□□□□ -1.79
SYNE2-202ENST00000344113 OVOS2A0A0J9YW53 1432 aa3.89□□□□□ -1.79
SYNE2-202ENST00000344113 OVOS2Q6IE36 1432 aa3.89□□□□□ -1.79
SYNE2-202ENST00000344113 RGSL1A5PLK6 1076 aa3.89□□□□□ -1.79
SYNE2-202ENST00000344113 KRT87PA6NCN2 255 aa3.89□□□□□ -1.79
SYNE2-202ENST00000344113 BUB1O43683 1085 aa3.89□□□□□ -1.79
SYNE2-202ENST00000344113 BANF1O75531 89 aa3.89□□□□□ -1.79
SYNE2-202ENST00000344113 NUDT7P0C024 238 aa3.89□□□□□ -1.79
SYNE2-202ENST00000344113 IMPDH1P20839 514 aa3.89□□□□□ -1.79
SYNE2-202ENST00000344113 ZNF618Q5T7W0 954 aa3.89□□□□□ -1.79
SYNE2-202ENST00000344113 ZNF544Q6NX49 715 aa3.89□□□□□ -1.79
SYNE2-202ENST00000344113 SCUBE1Q8IWY4 988 aa3.89□□□□□ -1.79
SYNE2-202ENST00000344113 METTL25Q8N6Q8 603 aa3.89□□□□□ -1.79
SYNE2-202ENST00000344113 ZBTB18Q99592 522 aa3.89□□□□□ -1.79
SYNE2-202ENST00000344113 OSBPL11Q9BXB4 747 aa3.89□□□□□ -1.79
SYNE2-202ENST00000344113 ISCUQ9H1K1 167 aa3.89□□□□□ -1.79
SYNE2-202ENST00000344113 SP140LQ9H930 580 aa3.89□□□□□ -1.79
SYNE2-202ENST00000344113 GPBP1L1Q9HC44 474 aaPredicted RBP3.89□□□□□ -1.79
SYNE2-202ENST00000344113 DNMBPQ6XZF7 1577 aa3.89□□□□□ -1.79
SYNE2-202ENST00000344113 GRIN2DO15399 1336 aa3.89□□□□□ -1.79
SYNE2-202ENST00000344113 KCNJ18B7U540 433 aa3.89□□□□□ -1.79
SYNE2-202ENST00000344113 SNX4O95219 450 aa3.89□□□□□ -1.79
SYNE2-202ENST00000344113 ATF4P18848 351 aaPredicted RBP3.89□□□□□ -1.79
SYNE2-202ENST00000344113 SFNP31947 248 aa3.89□□□□□ -1.79
SYNE2-202ENST00000344113 PPP4CP60510 307 aa3.89□□□□□ -1.79
SYNE2-202ENST00000344113 KCNJ12Q14500 433 aa3.89□□□□□ -1.79
SYNE2-202ENST00000344113 STAT4Q14765 748 aa3.89□□□□□ -1.79
SYNE2-202ENST00000344113 NCF4Q15080 339 aa3.89□□□□□ -1.79
SYNE2-202ENST00000344113 BRMS1LQ5PSV4 323 aa3.89□□□□□ -1.79
SYNE2-202ENST00000344113 TTBK2Q6IQ55 1244 aa3.89□□□□□ -1.79
SYNE2-202ENST00000344113 SULF1Q8IWU6 871 aa3.89□□□□□ -1.79
SYNE2-202ENST00000344113 AZIN2Q96A70 460 aa3.89□□□□□ -1.79
SYNE2-202ENST00000344113 PPP1R2P1Q96PQ5 205 aa3.89□□□□□ -1.79
SYNE2-202ENST00000344113 SLA2Q9H6Q3 261 aa3.89□□□□□ -1.79
SYNE2-202ENST00000344113 TLE6Q9H808 572 aa3.89□□□□□ -1.79
SYNE2-202ENST00000344113 MARCH7Q9H992 704 aa3.89□□□□□ -1.79
SYNE2-202ENST00000344113 FARSBQ9NSD9 589 aaKnown RBP3.89□□□□□ -1.79
SYNE2-202ENST00000344113 C15orf38-AP3S2A0A0A6YYH1 394 aa3.89□□□□□ -1.79
SYNE2-202ENST00000344113 CCDC182A6NF36 153 aa3.89□□□□□ -1.79
SYNE2-202ENST00000344113 PEPDP12955 493 aa3.89□□□□□ -1.79
SYNE2-202ENST00000344113 MAPK6Q16659 721 aa3.89□□□□□ -1.79
SYNE2-202ENST00000344113 P3H2Q8IVL5 708 aa3.89□□□□□ -1.79
SYNE2-202ENST00000344113 DDX54Q8TDD1 881 aaKnown RBP3.89□□□□□ -1.79
SYNE2-202ENST00000344113 ACOT12Q8WYK0 555 aa3.89□□□□□ -1.79
SYNE2-202ENST00000344113 CLP1Q92989 425 aaKnown RBP3.89□□□□□ -1.79
SYNE2-202ENST00000344113 GPATCH1Q9BRR8 931 aaKnown RBP3.89□□□□□ -1.79
SYNE2-202ENST00000344113 TRPM5Q9NZQ8 1165 aa3.89□□□□□ -1.79
SYNE2-202ENST00000344113 KCNH3Q9ULD8 1083 aa3.89□□□□□ -1.79
SYNE2-202ENST00000344113 STX8Q9UNK0 236 aa3.89□□□□□ -1.79
SYNE2-202ENST00000344113 GJB6O95452 261 aa3.89□□□□□ -1.79
SYNE2-202ENST00000344113 RGS6P49758 472 aa3.89□□□□□ -1.79
SYNE2-202ENST00000344113 SUCLG1P53597 346 aaKnown RBP3.89□□□□□ -1.79
SYNE2-202ENST00000344113 FBLN2P98095 1184 aa3.89□□□□□ -1.79
SYNE2-202ENST00000344113 PTPROQ16827 1216 aa3.89□□□□□ -1.79
SYNE2-202ENST00000344113 TBC1D16Q8TBP0 767 aa3.89□□□□□ -1.79
SYNE2-202ENST00000344113 CDH7Q9ULB5 785 aa3.89□□□□□ -1.79
SYNE2-202ENST00000344113 DENND2AQ9ULE3 1009 aa3.89□□□□□ -1.79
SYNE2-202ENST00000344113 URB1O60287 2271 aaKnown RBP3.89□□□□□ -1.79
SYNE2-202ENST00000344113 PLK4O00444 970 aa3.89□□□□□ -1.79
SYNE2-202ENST00000344113 DENRO43583 198 aaKnown RBP3.89□□□□□ -1.79
SYNE2-202ENST00000344113 MMP13P45452 471 aa3.89□□□□□ -1.79
SYNE2-202ENST00000344113 AK2P54819 239 aa3.89□□□□□ -1.79
SYNE2-202ENST00000344113 ARID5BQ14865 1188 aa3.89□□□□□ -1.79
SYNE2-202ENST00000344113 C16orf72Q14CZ0 275 aa3.89□□□□□ -1.79
SYNE2-202ENST00000344113 MTFR1Q15390 333 aa3.89□□□□□ -1.79
SYNE2-202ENST00000344113 WDR72Q3MJ13 1102 aa3.89□□□□□ -1.79
SYNE2-202ENST00000344113 C16orf62Q7Z3J2 963 aa3.89□□□□□ -1.79
SYNE2-202ENST00000344113 AKAP1Q92667 903 aaKnown RBP eCLIP3.89□□□□□ -1.79
SYNE2-202ENST00000344113 FAR2Q96K12 515 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms