RNA–Protein interactions for RNA: ENST00000341423.9

HMGB1-203, Transcript of high mobility group box 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB1, Length 5,485 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1-203ENST00000341423 SAAL1Q96ER3 474 aa8.77□□□□□ -1
HMGB1-203ENST00000341423 BCL2L12Q9HB09 334 aa8.77□□□□□ -1
HMGB1-203ENST00000341423 PCDHGB4Q9UN71 923 aa8.77□□□□□ -1
HMGB1-203ENST00000341423 BTBD18B2RXH4 712 aa8.77□□□□□ -1.01
HMGB1-203ENST00000341423 SLC31A1O15431 190 aa8.77□□□□□ -1.01
HMGB1-203ENST00000341423 RAP1GDS1P52306 607 aa8.77□□□□□ -1.01
HMGB1-203ENST00000341423 GHRHRQ02643 423 aa8.77□□□□□ -1.01
HMGB1-203ENST00000341423 ME3Q16798 604 aa8.77□□□□□ -1.01
HMGB1-203ENST00000341423 TRIM61Q5EBN2 209 aa8.77□□□□□ -1.01
HMGB1-203ENST00000341423 HID1Q8IV36 788 aa8.77□□□□□ -1.01
HMGB1-203ENST00000341423 ADSSL1Q8N142 457 aa8.77□□□□□ -1.01
HMGB1-203ENST00000341423 OR10G6Q8NH81 332 aa8.77□□□□□ -1.01
HMGB1-203ENST00000341423 MAPK15Q8TD08 544 aa8.77□□□□□ -1.01
HMGB1-203ENST00000341423 STAMBPL1Q96FJ0 436 aa8.77□□□□□ -1.01
HMGB1-203ENST00000341423 SENP8Q96LD8 212 aa8.77□□□□□ -1.01
HMGB1-203ENST00000341423 SERPINB11Q96P15 392 aa8.77□□□□□ -1.01
HMGB1-203ENST00000341423 DHX35Q9H5Z1 703 aaKnown RBP8.77□□□□□ -1.01
HMGB1-203ENST00000341423 AGPAT4Q9NRZ5 378 aa8.77□□□□□ -1.01
HMGB1-203ENST00000341423 GKN1Q9NS71 199 aa8.77□□□□□ -1.01
HMGB1-203ENST00000341423 RBPJLQ9UBG7 517 aa8.77□□□□□ -1.01
HMGB1-203ENST00000341423 GTF2IRD1Q9UHL9 959 aa8.77□□□□□ -1.01
HMGB1-203ENST00000341423 NEXMIFQ5QGS0 1516 aa8.77□□□□□ -1.01
HMGB1-203ENST00000341423 TIMM44O43615 452 aa8.77□□□□□ -1.01
HMGB1-203ENST00000341423 RECQL4O94761 1208 aa8.77□□□□□ -1.01
HMGB1-203ENST00000341423 EYA4O95677 639 aa8.77□□□□□ -1.01
HMGB1-203ENST00000341423 GPR1P46091 355 aa8.77□□□□□ -1.01
HMGB1-203ENST00000341423 PPP2R2AP63151 447 aa8.77□□□□□ -1.01
HMGB1-203ENST00000341423 CUL4AQ13619 759 aa8.77□□□□□ -1.01
HMGB1-203ENST00000341423 GRB14Q14449 540 aa8.77□□□□□ -1.01
HMGB1-203ENST00000341423 SF3B4Q15427 424 aaKnown RBP eCLIP8.77□□□□□ -1.011e-8■■■□□ 19.1
HMGB1-203ENST00000341423 ALX1Q15699 326 aa8.77□□□□□ -1.01
HMGB1-203ENST00000341423 MDH1BQ5I0G3 518 aa8.77□□□□□ -1.01
HMGB1-203ENST00000341423 IZUMO3Q5VZ72 239 aa8.77□□□□□ -1.01
HMGB1-203ENST00000341423 TTC29Q8NA56 475 aaPredicted RBP8.77□□□□□ -1.01
HMGB1-203ENST00000341423 CEP63Q96MT8 703 aa8.77□□□□□ -1.01
HMGB1-203ENST00000341423 LSM14BQ9BX40 385 aaKnown RBP8.77□□□□□ -1.01
HMGB1-203ENST00000341423 DDIT4Q9NX09 232 aa8.77□□□□□ -1.01
HMGB1-203ENST00000341423 BARHL2Q9NY43 387 aa8.77□□□□□ -1.01
HMGB1-203ENST00000341423 KCND2Q9NZV8 630 aa8.77□□□□□ -1.01
HMGB1-203ENST00000341423 MARCH2Q9P0N8 246 aa8.77□□□□□ -1.01
HMGB1-203ENST00000341423 DNAJC16Q9Y2G8 782 aa8.77□□□□□ -1.01
HMGB1-203ENST00000341423 GRXCR1A8MXD5 290 aa8.77□□□□□ -1.01
HMGB1-203ENST00000341423 ATP9BO43861 1147 aa8.77□□□□□ -1.01
HMGB1-203ENST00000341423 WFS1O76024 890 aa8.77□□□□□ -1.01
HMGB1-203ENST00000341423 HSP90AA4PQ58FG1 418 aa8.77□□□□□ -1.01
HMGB1-203ENST00000341423 ZNF605Q86T29 641 aa8.77□□□□□ -1.01
HMGB1-203ENST00000341423 CNGA4Q8IV77 575 aa8.77□□□□□ -1.01
HMGB1-203ENST00000341423 DSELQ8IZU8 1212 aa8.77□□□□□ -1.01
HMGB1-203ENST00000341423 DENND1AQ8TEH3 1009 aa8.77□□□□□ -1.01
HMGB1-203ENST00000341423 DIS3LQ8TF46 1054 aaKnown RBP8.77□□□□□ -1.01
HMGB1-203ENST00000341423 IQCDQ96DY2 449 aa8.77□□□□□ -1.01
HMGB1-203ENST00000341423 MAF1Q9H063 256 aa8.77□□□□□ -1.01
HMGB1-203ENST00000341423 CYP8B1Q9UNU6 501 aa8.77□□□□□ -1.01
HMGB1-203ENST00000341423 OAS3Q9Y6K5 1087 aaKnown RBP8.77□□□□□ -1.01
HMGB1-203ENST00000341423 A0A0D9SFI3 127 aa8.77□□□□□ -1.01
HMGB1-203ENST00000341423 SYN3O14994 580 aa8.77□□□□□ -1.01
HMGB1-203ENST00000341423 CSDE1O75534 798 aaKnown RBP8.77□□□□□ -1.01
HMGB1-203ENST00000341423 AGFG2O95081 481 aa8.77□□□□□ -1.01
HMGB1-203ENST00000341423 MPOP05164 745 aa8.77□□□□□ -1.01
HMGB1-203ENST00000341423 IFNAR1P17181 557 aa8.77□□□□□ -1.01
HMGB1-203ENST00000341423 MSH3P20585 1137 aa8.77□□□□□ -1.01
HMGB1-203ENST00000341423 MUTP22033 750 aa8.77□□□□□ -1.01
HMGB1-203ENST00000341423 ALDH4A1P30038 563 aa8.77□□□□□ -1.01
HMGB1-203ENST00000341423 NPEPPSP55786 919 aa8.77□□□□□ -1.01
HMGB1-203ENST00000341423 MPPE1Q53F39 396 aa8.77□□□□□ -1.01
HMGB1-203ENST00000341423 DNAJC21Q5F1R6 531 aaKnown RBP8.77□□□□□ -1.01
HMGB1-203ENST00000341423 PLPPR4Q7Z2D5 763 aa8.77□□□□□ -1.01
HMGB1-203ENST00000341423 C12orf76Q8N812 135 aaPredicted RBP8.77□□□□□ -1.01
HMGB1-203ENST00000341423 MYCBPAPQ8TBZ2 947 aa8.77□□□□□ -1.01
HMGB1-203ENST00000341423 UBE2TQ9NPD8 197 aaPredicted RBP8.77□□□□□ -1.01
HMGB1-203ENST00000341423 PDGFCQ9NRA1 345 aa8.77□□□□□ -1.01
HMGB1-203ENST00000341423 ATP6V1HQ9UI12 483 aa8.77□□□□□ -1.01
HMGB1-203ENST00000341423 BARX2Q9UMQ3 279 aaPredicted RBP8.77□□□□□ -1.01
HMGB1-203ENST00000341423 PHF24Q9UPV7 400 aa8.77□□□□□ -1.01
HMGB1-203ENST00000341423 SYNRGQ9UMZ2 1314 aa8.76□□□□□ -1.01
HMGB1-203ENST00000341423 TRPM1Q7Z4N2 1603 aa8.76□□□□□ -1.01
HMGB1-203ENST00000341423 FFAR2O15552 330 aa8.76□□□□□ -1.01
HMGB1-203ENST00000341423 ELP6Q0PNE2 266 aa8.76□□□□□ -1.01
HMGB1-203ENST00000341423 DUSP4Q13115 394 aa8.76□□□□□ -1.01
HMGB1-203ENST00000341423 TP53BP2Q13625 1128 aa8.76□□□□□ -1.01
HMGB1-203ENST00000341423 LBRQ14739 615 aaKnown RBP8.76□□□□□ -1.01
HMGB1-203ENST00000341423 PFKFB3Q16875 520 aaPredicted RBP8.76□□□□□ -1.01
HMGB1-203ENST00000341423 KRT39Q6A163 491 aa8.76□□□□□ -1.01
HMGB1-203ENST00000341423 ENAHQ8N8S7 591 aaPredicted RBP8.76□□□□□ -1.01
HMGB1-203ENST00000341423 VPS37AQ8NEZ2 397 aa8.76□□□□□ -1.01
HMGB1-203ENST00000341423 MSANTD3Q96H12 275 aa8.76□□□□□ -1.01
HMGB1-203ENST00000341423 PRR11Q96HE9 360 aaPredicted RBP8.76□□□□□ -1.01
HMGB1-203ENST00000341423 TMEM209Q96SK2 561 aa8.76□□□□□ -1.01
HMGB1-203ENST00000341423 OSBPL9Q96SU4 736 aa8.76□□□□□ -1.01
HMGB1-203ENST00000341423 ZDHHC6Q9H6R6 413 aa8.76□□□□□ -1.01
HMGB1-203ENST00000341423 SAMSN1Q9NSI8 373 aaKnown RBP8.76□□□□□ -1.01
HMGB1-203ENST00000341423 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.76□□□□□ -1.01
HMGB1-203ENST00000341423 TLK1Q9UKI8 766 aa8.76□□□□□ -1.01
HMGB1-203ENST00000341423 ANGPTL2Q9UKU9 493 aa8.76□□□□□ -1.01
HMGB1-203ENST00000341423 COL1A2P08123 1366 aa8.76□□□□□ -1.01
HMGB1-203ENST00000341423 TRIOBPQ9H2D6 2365 aa8.76□□□□□ -1.01
HMGB1-203ENST00000341423 C2orf71A6NGG8 1288 aa8.76□□□□□ -1.01
HMGB1-203ENST00000341423 MGEA5O60502 916 aa8.76□□□□□ -1.01
HMGB1-203ENST00000341423 ITGALP20701 1170 aa8.76□□□□□ -1.01
HMGB1-203ENST00000341423 GRK2P25098 689 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms