RNA–Protein interactions for RNA: ENST00000341360.6

ATP2B4-201, Transcript of ATPase plasma membrane Ca2+ transporting 4, humanhuman

TSL 1 (best) BASIC

Gene ATP2B4, Length 4,658 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B4-201ENST00000341360 OCM2P0CE71 109 aa8□□□□□ -1.13
ATP2B4-201ENST00000341360 OCMP0CE72 109 aaPredicted RBP8□□□□□ -1.13
ATP2B4-201ENST00000341360 MBL2P11226 248 aaPredicted RBP8□□□□□ -1.13
ATP2B4-201ENST00000341360 PTPN11Q06124 597 aaPredicted RBP8□□□□□ -1.13
ATP2B4-201ENST00000341360 CYP24A1Q07973 514 aa8□□□□□ -1.13
ATP2B4-201ENST00000341360 BTNL9Q6UXG8 535 aa8□□□□□ -1.13
ATP2B4-201ENST00000341360 KDM7AQ6ZMT4 941 aa8□□□□□ -1.13
ATP2B4-201ENST00000341360 SPATA21Q7Z572 469 aa8□□□□□ -1.13
ATP2B4-201ENST00000341360 DDX42Q86XP3 938 aaKnown RBP eCLIP8□□□□□ -1.13
ATP2B4-201ENST00000341360 USP38Q8NB14 1042 aa8□□□□□ -1.13
ATP2B4-201ENST00000341360 REPS2Q8NFH8 660 aa8□□□□□ -1.13
ATP2B4-201ENST00000341360 NKX2-3Q8TAU0 364 aa8□□□□□ -1.13
ATP2B4-201ENST00000341360 XPO6Q96QU8 1125 aaKnown RBP8□□□□□ -1.13
ATP2B4-201ENST00000341360 TMEM134Q9H6X4 195 aa8□□□□□ -1.13
ATP2B4-201ENST00000341360 KLC4Q9NSK0 619 aa8□□□□□ -1.13
ATP2B4-201ENST00000341360 CD274Q9NZQ7 290 aa8□□□□□ -1.13
ATP2B4-201ENST00000341360 TRHDEQ9UKU6 1024 aa8□□□□□ -1.13
ATP2B4-201ENST00000341360 BARX2Q9UMQ3 279 aaPredicted RBP8□□□□□ -1.13
ATP2B4-201ENST00000341360 MAPRE3Q9UPY8 281 aa8□□□□□ -1.13
ATP2B4-201ENST00000341360 FAM50BQ9Y247 325 aa8□□□□□ -1.13
ATP2B4-201ENST00000341360 GAKO14976 1311 aa7.99□□□□□ -1.13
ATP2B4-201ENST00000341360 M0R3G1 203 aa7.99□□□□□ -1.13
ATP2B4-201ENST00000341360 TGM2P21980 687 aa7.99□□□□□ -1.13
ATP2B4-201ENST00000341360 MDH1P40925 334 aaKnown RBP7.99□□□□□ -1.13
ATP2B4-201ENST00000341360 MAGEA4P43358 317 aa7.99□□□□□ -1.13
ATP2B4-201ENST00000341360 NFIAQ12857 509 aa7.99□□□□□ -1.13
ATP2B4-201ENST00000341360 NOGQ13253 232 aa7.99□□□□□ -1.13
ATP2B4-201ENST00000341360 CCDC149Q6ZUS6 474 aa7.99□□□□□ -1.13
ATP2B4-201ENST00000341360 TRIM69Q86WT6 500 aa7.99□□□□□ -1.13
ATP2B4-201ENST00000341360 LRRC6Q86X45 466 aa7.99□□□□□ -1.13
ATP2B4-201ENST00000341360 LRRC49Q8IUZ0 686 aa7.99□□□□□ -1.13
ATP2B4-201ENST00000341360 CAVIN3Q969G5 261 aa7.99□□□□□ -1.13
ATP2B4-201ENST00000341360 SCHIP1Q9P0W5 487 aaPredicted RBP7.99□□□□□ -1.13
ATP2B4-201ENST00000341360 VPS51Q9UID3 782 aa7.99□□□□□ -1.13
ATP2B4-201ENST00000341360 SLIT3O75094 1523 aa7.99□□□□□ -1.13
ATP2B4-201ENST00000341360 ATXN2Q99700 1313 aaKnown RBP7.99□□□□□ -1.13
ATP2B4-201ENST00000341360 PLA2G6O60733 806 aa7.99□□□□□ -1.13
ATP2B4-201ENST00000341360 RHOBTB1O94844 696 aa7.99□□□□□ -1.13
ATP2B4-201ENST00000341360 GNRH1P01148 92 aa7.99□□□□□ -1.13
ATP2B4-201ENST00000341360 RPN2P04844 631 aa7.99□□□□□ -1.13
ATP2B4-201ENST00000341360 SLC9A1P19634 815 aa7.99□□□□□ -1.13
ATP2B4-201ENST00000341360 ACO1P21399 889 aaKnown RBP7.99□□□□□ -1.13
ATP2B4-201ENST00000341360 PSEN1P49768 467 aa7.99□□□□□ -1.13
ATP2B4-201ENST00000341360 NAB1Q13506 487 aa7.99□□□□□ -1.13
ATP2B4-201ENST00000341360 GRIK4Q16099 956 aa7.99□□□□□ -1.13
ATP2B4-201ENST00000341360 TFDP3Q5H9I0 405 aa7.99□□□□□ -1.13
ATP2B4-201ENST00000341360 DACT2Q5SW24 774 aa7.99□□□□□ -1.13
ATP2B4-201ENST00000341360 SWT1Q5T5J6 900 aaKnown RBP7.99□□□□□ -1.13
ATP2B4-201ENST00000341360 KHDRBS2Q5VWX1 349 aaKnown RBP7.99□□□□□ -1.13
ATP2B4-201ENST00000341360 C11orf63Q6NUN7 778 aa7.99□□□□□ -1.13
ATP2B4-201ENST00000341360 FOXR2Q6PJQ5 311 aa7.99□□□□□ -1.13
ATP2B4-201ENST00000341360 UNC93AQ86WB7 457 aa7.99□□□□□ -1.13
ATP2B4-201ENST00000341360 SLC5A5Q92911 643 aa7.99□□□□□ -1.13
ATP2B4-201ENST00000341360 ZKSCAN4Q969J2 545 aaPredicted RBP7.99□□□□□ -1.13
ATP2B4-201ENST00000341360 MRPL48Q96GC5 212 aaKnown RBP7.99□□□□□ -1.13
ATP2B4-201ENST00000341360 TMEM176AQ96HP8 235 aa7.99□□□□□ -1.13
ATP2B4-201ENST00000341360 SH3GL1Q99961 368 aa7.99□□□□□ -1.13
ATP2B4-201ENST00000341360 SLC13A1Q9BZW2 595 aa7.99□□□□□ -1.13
ATP2B4-201ENST00000341360 TASP1Q9H6P5 420 aa7.99□□□□□ -1.13
ATP2B4-201ENST00000341360 METTL5Q9NRN9 209 aaKnown RBP7.99□□□□□ -1.13
ATP2B4-201ENST00000341360 WHRNQ9P202 907 aa7.99□□□□□ -1.13
ATP2B4-201ENST00000341360 DCDC2Q9UHG0 476 aa7.99□□□□□ -1.13
ATP2B4-201ENST00000341360 DNPEPQ9ULA0 475 aa7.99□□□□□ -1.13
ATP2B4-201ENST00000341360 TRAF3IP3Q9Y228 551 aa7.99□□□□□ -1.13
ATP2B4-201ENST00000341360 CDYLQ9Y232 598 aa7.99□□□□□ -1.13
ATP2B4-201ENST00000341360 PEAK1Q9H792 1746 aa7.99□□□□□ -1.13
ATP2B4-201ENST00000341360 FRMPD4Q14CM0 1322 aa7.99□□□□□ -1.13
ATP2B4-201ENST00000341360 NPHP3-ACAD11A0A0J9YXS1 232 aa7.99□□□□□ -1.13
ATP2B4-201ENST00000341360 SNTNA6NMZ2 147 aa7.99□□□□□ -1.13
ATP2B4-201ENST00000341360 RHOCP08134 193 aa7.99□□□□□ -1.13
ATP2B4-201ENST00000341360 WEE2P0C1S8 567 aa7.99□□□□□ -1.13
ATP2B4-201ENST00000341360 CCR1P32246 355 aa7.99□□□□□ -1.13
ATP2B4-201ENST00000341360 CACNB2Q08289 660 aaPredicted RBP7.99□□□□□ -1.13
ATP2B4-201ENST00000341360 PTK7Q13308 1070 aa7.99□□□□□ -1.13
ATP2B4-201ENST00000341360 PEX6Q13608 980 aa7.99□□□□□ -1.13
ATP2B4-201ENST00000341360 GIT2Q14161 759 aa7.99□□□□□ -1.13
ATP2B4-201ENST00000341360 PGM5Q15124 567 aa7.99□□□□□ -1.13
ATP2B4-201ENST00000341360 ZC2HC1CQ53FD0 456 aaPredicted RBP7.99□□□□□ -1.13
ATP2B4-201ENST00000341360 ZC3H12BQ5HYM0 836 aaKnown RBP7.99□□□□□ -1.13
ATP2B4-201ENST00000341360 ADCK2Q7Z695 626 aa7.99□□□□□ -1.13
ATP2B4-201ENST00000341360 BRSK2Q8IWQ3 736 aa7.99□□□□□ -1.13
ATP2B4-201ENST00000341360 ICA1LQ8NDH6 482 aa7.99□□□□□ -1.13
ATP2B4-201ENST00000341360 DPF3Q92784 378 aa7.99□□□□□ -1.13
ATP2B4-201ENST00000341360 LRRC1Q9BTT6 524 aa7.99□□□□□ -1.13
ATP2B4-201ENST00000341360 CXorf56Q9H5V9 222 aa7.99□□□□□ -1.13
ATP2B4-201ENST00000341360 PDGFCQ9NRA1 345 aa7.99□□□□□ -1.13
ATP2B4-201ENST00000341360 CHST12Q9NRB3 414 aa7.99□□□□□ -1.13
ATP2B4-201ENST00000341360 FBXO28Q9NVF7 368 aa7.99□□□□□ -1.13
ATP2B4-201ENST00000341360 NIPSNAP3AQ9UFN0 247 aaPredicted RBP7.99□□□□□ -1.13
ATP2B4-201ENST00000341360 GGA2Q9UJY4 613 aa7.99□□□□□ -1.13
ATP2B4-201ENST00000341360 NFASCO94856 1347 aa7.99□□□□□ -1.13
ATP2B4-201ENST00000341360 SDR42E2A6NKP2 422 aa7.99□□□□□ -1.13
ATP2B4-201ENST00000341360 LZTS3O60299 673 aaPredicted RBP7.99□□□□□ -1.13
ATP2B4-201ENST00000341360 SYNCRIPO60506 623 aaKnown RBP7.99□□□□□ -1.13
ATP2B4-201ENST00000341360 SRP72O76094 671 aaKnown RBP7.99□□□□□ -1.13
ATP2B4-201ENST00000341360 KRT8P05787 483 aa7.99□□□□□ -1.13
ATP2B4-201ENST00000341360 PTPN3P26045 913 aa7.99□□□□□ -1.13
ATP2B4-201ENST00000341360 HNRNPH1P31943 449 aaKnown RBP7.99□□□□□ -1.13
ATP2B4-201ENST00000341360 COILP38432 576 aaPredicted RBP7.99□□□□□ -1.13
ATP2B4-201ENST00000341360 NR2C2P49116 596 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms