RNA–Protein interactions for RNA: ENST00000340958.3

CLDN4-201, Transcript of claudin 4, humanhuman

APPRIS P1 BASIC

Gene CLDN4, Length 1,831 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-201ENST00000340958 CC2D1AQ6P1N0 951 aaPredicted RBP18.22■□□□□ 0.51
CLDN4-201ENST00000340958 B3GALT6Q96L58 329 aa18.22■□□□□ 0.51
CLDN4-201ENST00000340958 CARD9Q9H257 536 aa18.22■□□□□ 0.51
CLDN4-201ENST00000340958 F8VP50 259 aa18.21■□□□□ 0.51
CLDN4-201ENST00000340958 PGRMC1O00264 195 aaKnown RBP18.21■□□□□ 0.51
CLDN4-201ENST00000340958 PDE2AO00408 941 aaPredicted RBP18.21■□□□□ 0.51
CLDN4-201ENST00000340958 PAPSS1O43252 624 aaPredicted RBP18.21■□□□□ 0.51
CLDN4-201ENST00000340958 CTIFO43310 598 aaKnown RBP18.21■□□□□ 0.51
CLDN4-201ENST00000340958 RNF8O76064 485 aa18.21■□□□□ 0.51
CLDN4-201ENST00000340958 OR4Q2P0C623 313 aa18.21■□□□□ 0.51
CLDN4-201ENST00000340958 PDGFRAP16234 1089 aa18.21■□□□□ 0.51
CLDN4-201ENST00000340958 GPD1P21695 349 aa18.21■□□□□ 0.51
CLDN4-201ENST00000340958 MARCKSL1P49006 195 aa18.21■□□□□ 0.51
CLDN4-201ENST00000340958 OGDHQ02218 1023 aa18.21■□□□□ 0.51
CLDN4-201ENST00000340958 OLFML1Q6UWY5 402 aa18.21■□□□□ 0.51
CLDN4-201ENST00000340958 LRRTM3Q86VH5 581 aa18.21■□□□□ 0.51
CLDN4-201ENST00000340958 ALG3Q92685 438 aa18.21■□□□□ 0.51
CLDN4-201ENST00000340958 CD101Q93033 1021 aa18.21■□□□□ 0.51
CLDN4-201ENST00000340958 KCNK16Q96T55 309 aa18.21■□□□□ 0.51
CLDN4-201ENST00000340958 RHOBTB2Q9BYZ6 727 aa18.21■□□□□ 0.51
CLDN4-201ENST00000340958 TMLHEQ9NVH6 421 aa18.21■□□□□ 0.51
CLDN4-201ENST00000340958 ASNSD1Q9NWL6 643 aa18.21■□□□□ 0.51
CLDN4-201ENST00000340958 CDH23Q9H251 3354 aa18.21■□□□□ 0.51
CLDN4-201ENST00000340958 H7C4K7 107 aa18.21■□□□□ 0.51
CLDN4-201ENST00000340958 PSTPIP1O43586 416 aa18.21■□□□□ 0.51
CLDN4-201ENST00000340958 TKTL1P51854 596 aa18.21■□□□□ 0.51
CLDN4-201ENST00000340958 C2orf54Q08AI8 447 aa18.21■□□□□ 0.51
CLDN4-201ENST00000340958 CLUL1Q15846 466 aa18.21■□□□□ 0.51
CLDN4-201ENST00000340958 LONRF2Q1L5Z9 754 aa18.21■□□□□ 0.51
CLDN4-201ENST00000340958 ERCC6LQ2NKX8 1250 aa18.21■□□□□ 0.51
CLDN4-201ENST00000340958 KIAA1841Q6NSI8 718 aa18.21■□□□□ 0.51
CLDN4-201ENST00000340958 CCDC70Q6NSX1 233 aa18.21■□□□□ 0.51
CLDN4-201ENST00000340958 ACTRT1Q8TDG2 376 aa18.21■□□□□ 0.51
CLDN4-201ENST00000340958 FNIP1Q8TF40 1166 aa18.21■□□□□ 0.51
CLDN4-201ENST00000340958 KCTD13Q8WZ19 329 aa18.21■□□□□ 0.51
CLDN4-201ENST00000340958 NAP1L3Q99457 506 aaPredicted RBP18.21■□□□□ 0.51
CLDN4-201ENST00000340958 SMOQ99835 787 aa18.21■□□□□ 0.51
CLDN4-201ENST00000340958 ZBED2Q9BTP6 218 aa18.21■□□□□ 0.51
CLDN4-201ENST00000340958 TTPALQ9BTX7 342 aa18.21■□□□□ 0.51
CLDN4-201ENST00000340958 MTIF3Q9H2K0 278 aaKnown RBP18.21■□□□□ 0.51
CLDN4-201ENST00000340958 ABI2Q9NYB9 513 aaPredicted RBP18.21■□□□□ 0.51
CLDN4-201ENST00000340958 SDC4P31431 198 aa18.2■□□□□ 0.5
CLDN4-201ENST00000340958 GRIK1P39086 918 aa18.2■□□□□ 0.5
CLDN4-201ENST00000340958 HADHQ16836 314 aaKnown RBP18.2■□□□□ 0.5
CLDN4-201ENST00000340958 EFHC1Q5JVL4 640 aa18.2■□□□□ 0.5
CLDN4-201ENST00000340958 CCDC50Q8IVM0 306 aa18.2■□□□□ 0.5
CLDN4-201ENST00000340958 SPATA4Q8NEY3 305 aa18.2■□□□□ 0.5
CLDN4-201ENST00000340958 CLEC4CQ8WTT0 213 aa18.2■□□□□ 0.5
CLDN4-201ENST00000340958 RXFP2Q8WXD0 754 aa18.2■□□□□ 0.5
CLDN4-201ENST00000340958 FAM149B1Q96BN6 582 aa18.2■□□□□ 0.5
CLDN4-201ENST00000340958 ZNF558Q96NG5 402 aa18.2■□□□□ 0.5
CLDN4-201ENST00000340958 ZCWPW1Q9H0M4 648 aa18.2■□□□□ 0.5
CLDN4-201ENST00000340958 CWH43Q9H720 699 aa18.2■□□□□ 0.5
CLDN4-201ENST00000340958 DMAP1Q9NPF5 467 aaPredicted RBP18.2■□□□□ 0.5
CLDN4-201ENST00000340958 OR6C75A6NL08 312 aa18.19■□□□□ 0.5
CLDN4-201ENST00000340958 GRXCR1A8MXD5 290 aa18.19■□□□□ 0.5
CLDN4-201ENST00000340958 FGGP02679 453 aa18.19■□□□□ 0.5
CLDN4-201ENST00000340958 CPB1P15086 417 aa18.19■□□□□ 0.5
CLDN4-201ENST00000340958 FGFR3P22607 806 aa18.19■□□□□ 0.5
CLDN4-201ENST00000340958 PEX5P50542 639 aa18.19■□□□□ 0.5
CLDN4-201ENST00000340958 ZNF143P52747 638 aaPredicted RBP18.19■□□□□ 0.5
CLDN4-201ENST00000340958 RABGGTBP53611 331 aa18.19■□□□□ 0.5
CLDN4-201ENST00000340958 ZNF252P-AS1Q0IIN9 211 aa18.19■□□□□ 0.5
CLDN4-201ENST00000340958 SMC1AQ14683 1233 aaKnown RBP18.19■□□□□ 0.5
CLDN4-201ENST00000340958 TAF5Q15542 800 aa18.19■□□□□ 0.5
CLDN4-201ENST00000340958 NFE2Q16621 373 aaPredicted RBP18.19■□□□□ 0.5
CLDN4-201ENST00000340958 DCAF12L1Q5VU92 463 aa18.19■□□□□ 0.5
CLDN4-201ENST00000340958 KCNT2Q6UVM3 1135 aa18.19■□□□□ 0.5
CLDN4-201ENST00000340958 ANKS3Q6ZW76 656 aa18.19■□□□□ 0.5
CLDN4-201ENST00000340958 MTERF4Q7Z6M4 381 aaKnown RBP18.19■□□□□ 0.5
CLDN4-201ENST00000340958 TMEM173Q86WV6 379 aaPredicted RBP18.19■□□□□ 0.5
CLDN4-201ENST00000340958 NIPA2Q8N8Q9 360 aa18.19■□□□□ 0.5
CLDN4-201ENST00000340958 TSC1Q92574 1164 aa18.19■□□□□ 0.5
CLDN4-201ENST00000340958 TMEM169Q96HH4 297 aa18.19■□□□□ 0.5
CLDN4-201ENST00000340958 PIWIL1Q96J94 861 aaKnown RBP18.19■□□□□ 0.5
CLDN4-201ENST00000340958 SLC4A7Q9Y6M7 1214 aa18.19■□□□□ 0.5
CLDN4-201ENST00000340958 KRIT1O00522 736 aa18.19■□□□□ 0.5
CLDN4-201ENST00000340958 GABBR2O75899 941 aa18.19■□□□□ 0.5
CLDN4-201ENST00000340958 FBXO21O94952 628 aa18.19■□□□□ 0.5
CLDN4-201ENST00000340958 CETN2P41208 172 aa18.19■□□□□ 0.5
CLDN4-201ENST00000340958 RPL34P49207 117 aaKnown RBP18.19■□□□□ 0.5
CLDN4-201ENST00000340958 TAS2R40P59535 323 aa18.19■□□□□ 0.5
CLDN4-201ENST00000340958 NAA30Q147X3 362 aaPredicted RBP18.19■□□□□ 0.5
CLDN4-201ENST00000340958 ELF2Q15723 593 aa18.19■□□□□ 0.5
CLDN4-201ENST00000340958 CDO1Q16878 200 aa18.19■□□□□ 0.5
CLDN4-201ENST00000340958 SCN4BQ8IWT1 228 aa18.19■□□□□ 0.5
CLDN4-201ENST00000340958 CMTR2Q8IYT2 770 aaKnown RBP18.19■□□□□ 0.5
CLDN4-201ENST00000340958 ZNF689Q96CS4 500 aaPredicted RBP18.19■□□□□ 0.5
CLDN4-201ENST00000340958 IGSF21Q96ID5 467 aa18.19■□□□□ 0.5
CLDN4-201ENST00000340958 PGLYRP2Q96PD5 576 aa18.19■□□□□ 0.5
CLDN4-201ENST00000340958 PKMYT1Q99640 499 aa18.19■□□□□ 0.5
CLDN4-201ENST00000340958 CNPY3Q9BT09 278 aa18.19■□□□□ 0.5
CLDN4-201ENST00000340958 UBXN6Q9BZV1 441 aa18.19■□□□□ 0.5
CLDN4-201ENST00000340958 TMEM59LQ9UK28 342 aa18.19■□□□□ 0.5
CLDN4-201ENST00000340958 TSC2P49815 1807 aa18.18■□□□□ 0.5
CLDN4-201ENST00000340958 FNDC1Q4ZHG4 1894 aaPredicted RBP18.18■□□□□ 0.5
CLDN4-201ENST00000340958 GOLGA6L10A0A0M3HER8 536 aa18.18■□□□□ 0.5
CLDN4-201ENST00000340958 C2CD4BA6NLJ0 364 aa18.18■□□□□ 0.5
CLDN4-201ENST00000340958 PYGMP11217 842 aa18.18■□□□□ 0.5
CLDN4-201ENST00000340958 LAG3P18627 525 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms